Escherichia coli K-12 DH10B
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Working With: Genome: Escherichia coli K-12 DH10B Version: 10

AEC-0002168 (folX) - Escherichia coli K-12 DH10B - Feature Annotation

ASAP ID
AEC-0002168 showshow history
Names
folX ECDH10B_2465
Product
D-erythro-7,8-dihydroneopterin triphosphate 2'-epimerase and dihydroneopterin aldolase
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome forward 2511112 2511474 363 121
Sequence

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Context

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InterProScan
BLASTP
Protein Families to toptop
Author Approval Family Annotated
Automated Process Approved IPR006157 (IPR006157 Dihydroneopterin aldolase/epimerase domain) Jul 2009
Protein Domains to toptop
Internal error getting result
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Automated Process Approved GO biological process GO:0006760 folic acid-containing compound metabolic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR006157
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0004150 dihydroneopterin aldolase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR006157
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Approved name folX Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0007603
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Person Approved locus tag ECDH10B_2465 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu
Reference: Escherichia coli K-12 DH10B 		Feb 2008
Product
Person Approved product D-erythro-7,8-dihydroneopterin triphosphate 2'-epimerase and dihydroneopterin aldolase Published Annotation - PubMed ID: 16397293
Reference: Escherichia coli K-12 		Mar 2007
Protein Family
Automated Process Approved protein family IPR006157 Dihydroneopterin aldolase/epimerase domain Protein Sequence Similarity - InterPro Domain: IPR006157
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Other
Person Approved comment 100% identical to E. coli K-12 MG1655 feature ABE-0007603 Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0007603
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Gene Ontology
Automated Process Approved GO biological process GO:0006760 folic acid-containing compound metabolic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR006157
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0004150 dihydroneopterin aldolase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR006157
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0003358 folX CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0003246 folX CDS
Ortholog
Automated Process Uncurated Go view Escherichia albertii TW07627 AFX-0003225 folX CDS
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0005268 folX CDS
Automated Process Uncurated Go view Escherichia coli 536 (UPEC) AEF-0002360 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0008917 folX CDS
Automated Process Uncurated Go view Escherichia coli APEC O1 (APEC) AEG-0002250 folX CDS
Automated Process Uncurated Go view Escherichia coli ATCC 8739 AEM-0006938 CDS
Automated Process Uncurated Go view Escherichia coli B171 (EPEC) ADN-0009154 folX CDS
Automated Process Uncurated Go view Escherichia coli CFT073 (UPEC) ABR-0078983 folX CDS
Automated Process Uncurated Go view Escherichia coli E110019 (EPEC) ADM-0006582 folX CDS
Automated Process Uncurated Go view Escherichia coli E22 (EPEC) ADL-0005921 folX CDS
Automated Process Uncurated Go view Escherichia coli E2348/69 (EPEC) BCI-0002590 folX CDS
Automated Process Uncurated Go view Escherichia coli E24377A (ETEC) ADO-0007031 folX CDS
Automated Process Uncurated Go view Escherichia coli EC4024 (EHEC) BBI-0000672 CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0005306 folX CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0006749 folX CDS
Automated Process Uncurated Go view Escherichia coli EC4113 (EHEC) BAY-0006334 folX CDS
Automated Process Uncurated Go view Escherichia coli EC4115 (EHEC) BAS-0008283 folX CDS
Automated Process Uncurated Go view Escherichia coli EC4196 (EHEC) BAX-0005648 folX CDS
Automated Process Uncurated Go view Escherichia coli EC4206 (EHEC) BAW-0006069 folX CDS
Automated Process Uncurated Go view Escherichia coli EC4401 (EHEC) BAV-0007001 folX CDS
Automated Process Uncurated Go view Escherichia coli EC4486 (EHEC) BAU-0007351 folX CDS
Automated Process Uncurated Go view Escherichia coli EC508 (EHEC) BBJ-0006231 folX CDS
Automated Process Uncurated Go view Escherichia coli EC869 (EHEC) BBC-0007523 folX CDS
Automated Process Uncurated Go view Escherichia coli EDL933 (EHEC) ABH-0027276 folX CDS
Automated Process Uncurated Go view Escherichia coli F11 (UPEC) ADQ-0005140 folX CDS
Automated Process Uncurated Go view Escherichia coli HS ADR-0007126 folX CDS
Person Uncurated Go view Escherichia coli K-12 MG1655 ABE-0007603 folX CDS
Automated Process Uncurated Go view Escherichia coli K-12 W3110 ADY-0002379 folX CDS
Automated Process Uncurated Go view Escherichia coli SE11 AFS-0002602 CDS
Automated Process Uncurated Go view Escherichia coli SMS-3-5 AFT-0002458 folX CDS
Automated Process Uncurated Go view Escherichia coli Sakai (EHEC) ACA-0133198 folX CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0000083 CDS
Automated Process Uncurated Go view Escherichia coli UTI89 (UPEC) AEA-0002594 folX CDS
Automated Process Uncurated Go view Pectobacterium atrosepticum SCRI1043 ABL-0063332 folX CDS
Automated Process Uncurated Go view Pectobacterium brasiliensis 1692 AED-0001700 folX CDS
Automated Process Uncurated Go view Pectobacterium carotovorum WPP14 ADT-0001947 folX CDS
Automated Process Uncurated Go view Pectobacterium parmentieri WPP163 AFJ-0000285 folX CDS
Automated Process Uncurated Go view Shigella boydii 227 ADV-0002585 folX CDS
Automated Process Uncurated Go view Shigella boydii BS512 ADJ-0008088 folX CDS
Automated Process Uncurated Go view Shigella dysenteriae 1012 BAA-0005471 folX CDS
Automated Process Uncurated Go view Shigella dysenteriae 197 ADU-0002872 folX CDS
Automated Process Uncurated Go view Shigella flexneri 2457T ABQ-0073656 folX CDS
Automated Process Uncurated Go view Shigella flexneri 301 ABT-0088640 folX CDS
Automated Process Uncurated Go view Shigella flexneri 8401 BAG-0002539 folX CDS
Automated Process Uncurated Go view Shigella sonnei 046 ADD-0002581 folX CDS
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 2506112 to 2516474
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
AEC-0000001sourceforward14686137Contains
AEC-0002162ptaCDSforward25045342506678Upstream
AEC-0002163yfcCCDSforward25068682508388Upstream
AEC-0002164yfcDCDScomplement25084212508963Upstream
AEC-0002165yfcECDScomplement25090212509575Upstream
AEC-0002166yfcFCDScomplement25096282510272Upstream
AEC-0002167yfcGCDSforward25104082511055Upstream
AEC-0002168folXCDSforward25111122511474Matches
AEC-0002169yfcHCDSforward25114952512388Downstream
AEC-0002170yfcICDScomplement25124362513326Downstream
AEC-0002171hisPCDScomplement25135232514296Downstream
AEC-0002172hisMCDScomplement25143042515020Downstream
AEC-0002173hisQCDScomplement25150172515703Downstream
AEC-0002174hisJCDScomplement25157932516575Downstream
Release Notes to toptop
submitted to GenBank; assigned accession number CP000948