Escherichia coli K-12 DH10B
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Working With: Genome: Escherichia coli K-12 DH10B Version: 10

AEC-0002180 (folC) - Escherichia coli K-12 DH10B - Feature Annotation

ASAP ID
AEC-0002180 showshow history
Names
folC ECDH10B_2477
Product
bifunctional folylpolyglutamate synthase and dihydrofolate synthase
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome complement 2521461 2522729 1269 423
Sequence

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Context

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Pre-Run Search Results
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InterProScan
BLASTP
Protein Families to toptop
Author Approval Family Annotated
Automated Process Approved IPR013221 (IPR013221 Mur ligase, central) Jul 2009
Automated Process Approved IPR004101 (IPR004101 Mur ligase, C-terminal) Jul 2009
Automated Process Approved IPR001645 (IPR001645 Folylpolyglutamate synthetase) Jul 2009
Protein Domains to toptop
Internal error getting result
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Automated Process Approved GO biological process GO:0009058 biosynthetic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR013221
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0016874 ligase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR004101
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Approved name folC Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0007645
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Person Approved locus tag ECDH10B_2477 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu
Reference: Escherichia coli K-12 DH10B 		Feb 2008
Product
Person Approved product bifunctional folylpolyglutamate synthase and dihydrofolate synthase Published Annotation - PubMed ID: 16397293
Reference: Escherichia coli K-12 		Mar 2007
Protein Family
Automated Process Approved protein family IPR004101 Mur ligase, C-terminal Protein Sequence Similarity - InterPro Domain: IPR004101
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR001645 Folylpolyglutamate synthetase Protein Sequence Similarity - InterPro Domain: IPR001645
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR013221 Mur ligase, central Protein Sequence Similarity - InterPro Domain: IPR013221
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Other
Person Approved comment 100% identical to E. coli K-12 MG1655 feature ABE-0007645 Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0007645
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Gene Ontology
Automated Process Approved GO biological process GO:0009058 biosynthetic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR013221
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0016874 ligase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR004101
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0000159 folC CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0000142 folC CDS
Ortholog
Automated Process Uncurated Go view Dickeya dadantii 3937 ABF-0017782 folC CDS
Automated Process Uncurated Go view Erwinia tasmaniensis Et1/99 [T] AFI-0001226 folC CDS
Automated Process Uncurated Go view Escherichia albertii TW07627 AFX-0003213 folC CDS
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0005280 folC CDS
Automated Process Uncurated Go view Escherichia coli 536 (UPEC) AEF-0002372 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0008904 folC CDS
Automated Process Uncurated Go view Escherichia coli APEC O1 (APEC) AEG-0002262 folC CDS
Automated Process Uncurated Go view Escherichia coli ATCC 8739 AEM-0006924 CDS
Automated Process Uncurated Go view Escherichia coli B171 (EPEC) ADN-0009166 folC CDS
Automated Process Uncurated Go view Escherichia coli B7A (ETEC) ADK-0010395 CDS
Automated Process Uncurated Go view Escherichia coli CFT073 (UPEC) ABR-0078997 folC CDS
Automated Process Uncurated Go view Escherichia coli E110019 (EPEC) ADM-0006594 folC CDS
Automated Process Uncurated Go view Escherichia coli E22 (EPEC) ADL-0005934 folC CDS
Automated Process Uncurated Go view Escherichia coli E2348/69 (EPEC) BCI-0002602 folC CDS
Automated Process Uncurated Go view Escherichia coli E24377A (ETEC) ADO-0007043 folC CDS
Automated Process Uncurated Go view Escherichia coli EC4042 (EHEC) BBA-0006796 folC CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0005318 folC CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0006761 folC CDS
Automated Process Uncurated Go view Escherichia coli EC4113 (EHEC) BAY-0006346 folC CDS
Automated Process Uncurated Go view Escherichia coli EC4115 (EHEC) BAS-0008295 folC CDS
Automated Process Uncurated Go view Escherichia coli EC4196 (EHEC) BAX-0005636 folC CDS
Automated Process Uncurated Go view Escherichia coli EC4206 (EHEC) BAW-0006081 folC CDS
Automated Process Uncurated Go view Escherichia coli EC4401 (EHEC) BAV-0007013 folC CDS
Automated Process Uncurated Go view Escherichia coli EC4486 (EHEC) BAU-0007363 folC CDS
Automated Process Uncurated Go view Escherichia coli EC4501 (EHEC) BAT-0006833 folC CDS
Automated Process Uncurated Go view Escherichia coli EC508 (EHEC) BBJ-0006243 folC CDS
Automated Process Uncurated Go view Escherichia coli EC869 (EHEC) BBC-0007535 folC CDS
Automated Process Uncurated Go view Escherichia coli EDL933 (EHEC) ABH-0027289 folC CDS
Automated Process Uncurated Go view Escherichia coli F11 (UPEC) ADQ-0005152 folC CDS
Automated Process Uncurated Go view Escherichia coli HS ADR-0007139 folC CDS
Person Uncurated Go view Escherichia coli K-12 MG1655 ABE-0007645 folC CDS
Automated Process Uncurated Go view Escherichia coli K-12 W3110 ADY-0002391 folC CDS
Automated Process Uncurated Go view Escherichia coli SE11 AFS-0002665 CDS
Automated Process Uncurated Go view Escherichia coli SMS-3-5 AFT-0002470 folC CDS
Automated Process Uncurated Go view Escherichia coli Sakai (EHEC) ACA-0133210 folC CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0000071 CDS
Automated Process Uncurated Go view Escherichia coli UTI89 (UPEC) AEA-0002607 folC CDS
Automated Process Uncurated Go view Pectobacterium atrosepticum SCRI1043 ABL-0063342 folC CDS
Automated Process Uncurated Go view Pectobacterium brasiliensis 1692 AED-0001758 folC CDS
Automated Process Uncurated Go view Pectobacterium carotovorum WPP14 ADT-0001953 folC CDS
Automated Process Uncurated Go view Pectobacterium parmentieri WPP163 AFJ-0000296 folC CDS
Automated Process Uncurated Go view Salmonella Agona SL483 BBX-0006676 folC CDS
Automated Process Uncurated Go view Salmonella Arizonae CDC 346-86 BCD-0000561 CDS
Automated Process Uncurated Go view Salmonella Choleraesuis SC-B67 ADB-0002765 folC CDS
Automated Process Uncurated Go view Salmonella Dublin CT_02021853 BCB-0006980 folC CDS
Automated Process Uncurated Go view Salmonella Enteritidis P125109 BCF-0007581 folC CDS
Automated Process Uncurated Go view Salmonella Gallinarum 287/91 BCG-0007205 folC CDS
Automated Process Uncurated Go view Salmonella Hadar RI_05P066 BBT-0006161 folC CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL476 BBV-0006969 folC CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL486 BBW-0006271 folC CDS
Automated Process Uncurated Go view Salmonella Javiana GA_MM04042433 BCA-0006704 folC CDS
Automated Process Uncurated Go view Salmonella Kentucky CDC 191 BBZ-0004355 folC CDS
Automated Process Uncurated Go view Salmonella Kentucky CVM29188 BBP-0006110 folC CDS
Automated Process Uncurated Go view Salmonella Newport SL254 BBQ-0006915 folC CDS
Automated Process Uncurated Go view Salmonella Newport SL317 BBR-0007346 folC CDS
Automated Process Uncurated Go view Salmonella Paratyphi A AKU_12601 BCH-0000500 CDS
Automated Process Uncurated Go view Salmonella Paratyphi A ATCC 9150 ADA-0000499 folC CDS
Automated Process Uncurated Go view Salmonella Paratyphi B SPB7 BCC-0000611 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA23 BBN-0007159 folC CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA29 BBM-0005023 folC CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund CVM19633 BBO-0006672 CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund SL480 BBY-0006649 CDS
Automated Process Uncurated Go view Salmonella Typhi CT18 ABX-0110415 folC CDS
Automated Process Uncurated Go view Salmonella Typhi Ty2 ABS-0082211 folC CDS
Automated Process Uncurated Go view Salmonella Typhimurium LT2 [T] ABU-0097543 folC CDS
Automated Process Uncurated Go view Salmonella Virchow SL491 BBS-0006913 CDS
Automated Process Uncurated Go view Salmonella Weltevreden SL484 BBU-0004418 CDS
Automated Process Uncurated Go view Salmonella enterica CVM23701 BBL-0007223 folC CDS
Automated Process Uncurated Go view Shigella boydii 227 ADV-0002600 folC CDS
Automated Process Uncurated Go view Shigella boydii BS512 ADJ-0008102 folC CDS
Automated Process Uncurated Go view Shigella dysenteriae 1012 BAA-0005457 folC CDS
Automated Process Uncurated Go view Shigella dysenteriae 197 ADU-0002887 folC CDS
Automated Process Uncurated Go view Shigella flexneri 2457T ABQ-0073669 folC CDS
Automated Process Uncurated Go view Shigella flexneri 301 ABT-0088652 folC CDS
Automated Process Uncurated Go view Shigella flexneri 8401 BAG-0002554 folC CDS
Automated Process Uncurated Go view Shigella sonnei 046 ADD-0002595 folC CDS
Automated Process Uncurated Go view Yersinia bercovieri ATCC 43970 [T] AEK-0002419 CDS
Automated Process Uncurated Go view Yersinia enterocolitica 8081 BAH-0003926 dedC CDS
Automated Process Uncurated Go view Yersinia frederiksenii ATCC 33641 [T] AEI-0000657 dedC CDS
Automated Process Uncurated Go view Yersinia intermedia ATCC 29909 [T] AEH-0003196 folC CDS
Automated Process Uncurated Go view Yersinia mollaretii ATCC 43969 [T] AEJ-0002910 CDS
Automated Process Uncurated Go view Yersinia pestis 91001 (biovar Microtus) ACQ-0240061 folC CDS
Automated Process Uncurated Go view Yersinia pestis Angola (biovar Pestoides) ADI-0004463 folC CDS
Automated Process Uncurated Go view Yersinia pestis Antiqua (biovar Antiqua) BAE-0002500 folC CDS
Automated Process Uncurated Go view Yersinia pestis B42003004 (biovar Antiqua) BAL-0008318 folC CDS
Automated Process Uncurated Go view Yersinia pestis CA88-4125 (biovar Orientalis) BAF-0000617 folC CDS
Automated Process Uncurated Go view Yersinia pestis CO92 (biovar Orientalis) ABY-0124585 folC CDS
Automated Process Uncurated Go view Yersinia pestis E1979001 (biovar Antiqua) BAM-0004254 folC CDS
Automated Process Uncurated Go view Yersinia pestis F1991016 (biovar Orientalis) BAQ-0005472 folC CDS
Automated Process Uncurated Go view Yersinia pestis FV-1 (biovar Orientalis) BAK-0003764 CDS
Automated Process Uncurated Go view Yersinia pestis IP275 (biovar Orientalis) BAC-0006305 folC CDS
Automated Process Uncurated Go view Yersinia pestis K1973002 (biovar Mediaevalis) BAO-0005525 folC CDS
Automated Process Uncurated Go view Yersinia pestis KIM (biovar Mediaevalis) ABI-0031290 folC CDS
Automated Process Uncurated Go view Yersinia pestis MG05-1020 (biovar Orientalis) BAP-0007351 folC CDS
Automated Process Uncurated Go view Yersinia pestis Nepal516 (biovar Antiqua) BAD-0002618 folC CDS
Automated Process Uncurated Go view Yersinia pestis Pestoides F (biovar Pestoides) BAI-0002384 CDS
Automated Process Uncurated Go view Yersinia pestis UG05-0454 (biovar Antiqua) BAN-0005739 folC CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP31758 ADS-0005389 folC CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP32953 ACZ-0002703 folC CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis PB1/+ AFV-0003231 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis YPIII AFW-0001804 CDS
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 2516461 to 2527729
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
AEC-0000001sourceforward14686137Contains
AEC-0002174hisJCDScomplement25157932516575Downstream
AEC-0002175argTCDScomplement25167962517578Downstream
AEC-0002176ubiXCDScomplement25178442518413Downstream
AEC-0002177purFCDScomplement25185082520025Downstream
AEC-0002178cvpACDScomplement25200622520550Downstream
AEC-0002179dedDCDScomplement25208092521471Overlaps Downstream
AEC-0002180folCCDScomplement25214612522729Matches
AEC-0002181accDCDScomplement25227992523713Upstream
AEC-0002182dedACDScomplement25238692524528Upstream
AEC-0002183truACDScomplement25246112525423Upstream
AEC-0002184usgCDScomplement25254232526436Upstream
AEC-0002185pdxBCDScomplement25265022527638Upstream
Release Notes to toptop
submitted to GenBank; assigned accession number CP000948