Escherichia coli K-12 DH10B
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Working With: Genome: Escherichia coli K-12 DH10B Version: 10

AEC-0002181 (accD) - Escherichia coli K-12 DH10B - Feature Annotation

ASAP ID
AEC-0002181 showshow history
Names
accD ECDH10B_2478
Product
acetyl-CoA carboxylase, beta (carboxyltranferase) subunit
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome complement 2522799 2523713 915 305
Sequence

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Context

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Pre-Run Search Results
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InterProScan
BLASTP
Protein Families to toptop
Author Approval Family Annotated
Automated Process Approved IPR000438 (IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit) Jul 2009
Automated Process Approved IPR000022 (IPR000022 (DEPRECATED) Carboxyl transferase) Jul 2009
Automated Process Approved IPR011762 (IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal) Jul 2009
Protein Domains to toptop
Internal error getting result
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Automated Process Approved GO biological process GO:0006633 fatty acid biosynthetic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR000438
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO cellular component GO:0009317 acetyl-CoA carboxylase complex GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR000438
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0016874 ligase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR000022
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0003989 acetyl-CoA carboxylase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR000438
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Approved name accD Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0007648
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Person Approved locus tag ECDH10B_2478 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu
Reference: Escherichia coli K-12 DH10B 		Feb 2008
Product
Person Approved product acetyl-CoA carboxylase, beta (carboxyltranferase) subunit Published Annotation - PubMed ID: 16397293
Reference: Escherichia coli K-12 		Mar 2007
Protein Family
Automated Process Approved protein family IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit Protein Sequence Similarity - InterPro Domain: IPR000438
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal Protein Sequence Similarity - InterPro Domain: IPR011762
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR000022 (DEPRECATED) Carboxyl transferase Protein Sequence Similarity - InterPro Domain: IPR000022
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Other
Person Approved comment 100% identical to E. coli K-12 MG1655 feature ABE-0007648 Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0007648
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Gene Ontology
Automated Process Approved GO biological process GO:0006633 fatty acid biosynthetic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR000438
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO cellular component GO:0009317 acetyl-CoA carboxylase complex GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR000438
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0016874 ligase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR000022
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0003989 acetyl-CoA carboxylase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR000438
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0000436 accD CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0000359 accD CDS
Ortholog
Automated Process Uncurated Go view Dickeya dadantii 3937 ABF-0017783 accD CDS
Automated Process Uncurated Go view Erwinia tasmaniensis Et1/99 [T] AFI-0001225 accD CDS
Automated Process Uncurated Go view Escherichia albertii TW07627 AFX-0003212 accD CDS
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0005281 accD CDS
Automated Process Uncurated Go view Escherichia coli 536 (UPEC) AEF-0002373 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0008903 accD CDS
Automated Process Uncurated Go view Escherichia coli APEC O1 (APEC) AEG-0002263 accD CDS
Automated Process Uncurated Go view Escherichia coli ATCC 8739 AEM-0006923 CDS
Automated Process Uncurated Go view Escherichia coli B171 (EPEC) ADN-0009167 accD CDS
Automated Process Uncurated Go view Escherichia coli B7A (ETEC) ADK-0010396 CDS
Automated Process Uncurated Go view Escherichia coli CFT073 (UPEC) ABR-0078998 accD CDS
Automated Process Uncurated Go view Escherichia coli E110019 (EPEC) ADM-0006595 accD CDS
Automated Process Uncurated Go view Escherichia coli E22 (EPEC) ADL-0005935 accD CDS
Automated Process Uncurated Go view Escherichia coli E2348/69 (EPEC) BCI-0002603 accD CDS
Automated Process Uncurated Go view Escherichia coli E24377A (ETEC) ADO-0007044 accD CDS
Automated Process Uncurated Go view Escherichia coli EC4024 (EHEC) BBI-0000685 CDS
Automated Process Uncurated Go view Escherichia coli EC4042 (EHEC) BBA-0006797 accD CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0005319 accD CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0006762 accD CDS
Automated Process Uncurated Go view Escherichia coli EC4113 (EHEC) BAY-0006347 accD CDS
Automated Process Uncurated Go view Escherichia coli EC4115 (EHEC) BAS-0008296 accD CDS
Automated Process Uncurated Go view Escherichia coli EC4196 (EHEC) BAX-0005635 accD CDS
Automated Process Uncurated Go view Escherichia coli EC4206 (EHEC) BAW-0006082 accD CDS
Automated Process Uncurated Go view Escherichia coli EC4401 (EHEC) BAV-0007014 accD CDS
Automated Process Uncurated Go view Escherichia coli EC4486 (EHEC) BAU-0007364 accD CDS
Automated Process Uncurated Go view Escherichia coli EC4501 (EHEC) BAT-0006832 accD CDS
Automated Process Uncurated Go view Escherichia coli EC508 (EHEC) BBJ-0006244 accD CDS
Automated Process Uncurated Go view Escherichia coli EC869 (EHEC) BBC-0007536 accD CDS
Automated Process Uncurated Go view Escherichia coli EDL933 (EHEC) ABH-0027290 accD CDS
Automated Process Uncurated Go view Escherichia coli F11 (UPEC) ADQ-0005153 accD CDS
Automated Process Uncurated Go view Escherichia coli HS ADR-0007140 accD CDS
Person Uncurated Go view Escherichia coli K-12 MG1655 ABE-0007648 accD CDS
Automated Process Uncurated Go view Escherichia coli K-12 W3110 ADY-0002392 accD CDS
Automated Process Uncurated Go view Escherichia coli SE11 AFS-0002666 CDS
Automated Process Uncurated Go view Escherichia coli SMS-3-5 AFT-0002471 accD CDS
Automated Process Uncurated Go view Escherichia coli Sakai (EHEC) ACA-0133211 accD CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0000070 CDS
Automated Process Uncurated Go view Escherichia coli UTI89 (UPEC) AEA-0002608 accD CDS
Automated Process Uncurated Go view Pectobacterium atrosepticum SCRI1043 ABL-0063343 accD CDS
Automated Process Uncurated Go view Pectobacterium brasiliensis 1692 AED-0001767 accD CDS
Automated Process Uncurated Go view Pectobacterium carotovorum WPP14 ADT-0004076 CDS
Automated Process Uncurated Go view Pectobacterium parmentieri WPP163 AFJ-0000297 accD CDS
Automated Process Uncurated Go view Salmonella Agona SL483 BBX-0006677 accD CDS
Automated Process Uncurated Go view Salmonella Arizonae CDC 346-86 BCD-0000559 CDS
Automated Process Uncurated Go view Salmonella Choleraesuis SC-B67 ADB-0002766 accD CDS
Automated Process Uncurated Go view Salmonella Dublin CT_02021853 BCB-0006981 accD CDS
Automated Process Uncurated Go view Salmonella Enteritidis P125109 BCF-0007586 accD CDS
Automated Process Uncurated Go view Salmonella Gallinarum 287/91 BCG-0007210 accD CDS
Automated Process Uncurated Go view Salmonella Hadar RI_05P066 BBT-0006160 accD CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL476 BBV-0006970 accD CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL486 BBW-0006272 accD CDS
Automated Process Uncurated Go view Salmonella Javiana GA_MM04042433 BCA-0006705 accD CDS
Automated Process Uncurated Go view Salmonella Kentucky CDC 191 BBZ-0004356 accD CDS
Automated Process Uncurated Go view Salmonella Kentucky CVM29188 BBP-0006111 accD CDS
Automated Process Uncurated Go view Salmonella Newport SL254 BBQ-0006916 accD CDS
Automated Process Uncurated Go view Salmonella Newport SL317 BBR-0007345 accD CDS
Automated Process Uncurated Go view Salmonella Paratyphi A AKU_12601 BCH-0000499 CDS
Automated Process Uncurated Go view Salmonella Paratyphi A ATCC 9150 ADA-0000498 accD CDS
Automated Process Uncurated Go view Salmonella Paratyphi B SPB7 BCC-0000610 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA23 BBN-0007160 accD CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA29 BBM-0005022 accD CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund CVM19633 BBO-0006673 accD CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund SL480 BBY-0006650 accD CDS
Automated Process Uncurated Go view Salmonella Typhi CT18 ABX-0110419 accD CDS
Automated Process Uncurated Go view Salmonella Typhi Ty2 ABS-0082210 accD CDS
Automated Process Uncurated Go view Salmonella Typhimurium LT2 [T] ABU-0097547 accD CDS
Automated Process Uncurated Go view Salmonella Virchow SL491 BBS-0006912 accD CDS
Automated Process Uncurated Go view Salmonella Weltevreden SL484 BBU-0004417 accD CDS
Automated Process Uncurated Go view Salmonella enterica CVM23701 BBL-0007224 accD CDS
Automated Process Uncurated Go view Shigella boydii 227 ADV-0002601 accD CDS
Automated Process Uncurated Go view Shigella boydii BS512 ADJ-0008103 accD CDS
Automated Process Uncurated Go view Shigella dysenteriae 1012 BAA-0005456 accD CDS
Automated Process Uncurated Go view Shigella dysenteriae 197 ADU-0002888 accD CDS
Automated Process Uncurated Go view Shigella flexneri 2457T ABQ-0073670 accD CDS
Automated Process Uncurated Go view Shigella flexneri 301 ABT-0088653 accD CDS
Automated Process Uncurated Go view Shigella flexneri 8401 BAG-0002555 accD CDS
Automated Process Uncurated Go view Shigella sonnei 046 ADD-0002596 accD CDS
Automated Process Uncurated Go view Yersinia bercovieri ATCC 43970 [T] AEK-0002420 CDS
Automated Process Uncurated Go view Yersinia enterocolitica 8081 BAH-0003924 accD CDS
Automated Process Uncurated Go view Yersinia frederiksenii ATCC 33641 [T] AEI-0000658 accD CDS
Automated Process Uncurated Go view Yersinia intermedia ATCC 29909 [T] AEH-0003195 accD CDS
Automated Process Uncurated Go view Yersinia mollaretii ATCC 43969 [T] AEJ-0002911 CDS
Automated Process Uncurated Go view Yersinia pestis 91001 (biovar Microtus) ACQ-0240063 accD CDS
Automated Process Uncurated Go view Yersinia pestis Angola (biovar Pestoides) ADI-0004464 accD CDS
Automated Process Uncurated Go view Yersinia pestis Antiqua (biovar Antiqua) BAE-0002501 accD CDS
Automated Process Uncurated Go view Yersinia pestis B42003004 (biovar Antiqua) BAL-0008319 accD CDS
Automated Process Uncurated Go view Yersinia pestis CA88-4125 (biovar Orientalis) BAF-0000616 accD CDS
Automated Process Uncurated Go view Yersinia pestis CO92 (biovar Orientalis) ABY-0124583 accD CDS
Automated Process Uncurated Go view Yersinia pestis E1979001 (biovar Antiqua) BAM-0004253 accD CDS
Automated Process Uncurated Go view Yersinia pestis F1991016 (biovar Orientalis) BAQ-0005471 accD CDS
Automated Process Uncurated Go view Yersinia pestis FV-1 (biovar Orientalis) BAK-0003765 CDS
Automated Process Uncurated Go view Yersinia pestis IP275 (biovar Orientalis) BAC-0006304 accD CDS
Automated Process Uncurated Go view Yersinia pestis K1973002 (biovar Mediaevalis) BAO-0005526 accD CDS
Automated Process Uncurated Go view Yersinia pestis KIM (biovar Mediaevalis) ABI-0031289 accD CDS
Automated Process Uncurated Go view Yersinia pestis MG05-1020 (biovar Orientalis) BAP-0007350 accD CDS
Automated Process Uncurated Go view Yersinia pestis Nepal516 (biovar Antiqua) BAD-0002619 accD CDS
Automated Process Uncurated Go view Yersinia pestis Pestoides F (biovar Pestoides) BAI-0002385 CDS
Automated Process Uncurated Go view Yersinia pestis UG05-0454 (biovar Antiqua) BAN-0005738 accD CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP31758 ADS-0005388 accD CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP32953 ACZ-0002704 accD CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis PB1/+ AFV-0003232 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis YPIII AFW-0001803 CDS
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 2517799 to 2528713
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
AEC-0000001sourceforward14686137Contains
AEC-0002176ubiXCDScomplement25178442518413Downstream
AEC-0002177purFCDScomplement25185082520025Downstream
AEC-0002178cvpACDScomplement25200622520550Downstream
AEC-0002179dedDCDScomplement25208092521471Downstream
AEC-0002180folCCDScomplement25214612522729Downstream
AEC-0002181accDCDScomplement25227992523713Matches
AEC-0002182dedACDScomplement25238692524528Upstream
AEC-0002183truACDScomplement25246112525423Upstream
AEC-0002184usgCDScomplement25254232526436Upstream
AEC-0002185pdxBCDScomplement25265022527638Upstream
AEC-0002186flkCDSforward25277372528732Upstream
Release Notes to toptop
submitted to GenBank; assigned accession number CP000948