Escherichia coli K-12 DH10B
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Working With: Genome: Escherichia coli K-12 DH10B Version: 10

AEC-0002254 (mntH) - Escherichia coli K-12 DH10B - Feature Annotation

ASAP ID
AEC-0002254 showshow history
Names
mntH ECDH10B_2556
Product
manganese/divalent cation transporter
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome complement 2601255 2602493 1239 413
Sequence

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Context

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Pre-Run Search Results
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InterProScan
BLASTP
Protein Families to toptop
Author Approval Family Annotated
Automated Process Approved IPR001046 (IPR001046 NRAMP family) Jul 2009
Protein Domains to toptop
Internal error getting result
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Automated Process Approved GO biological process GO:0006810 transport GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001046
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO cellular component GO:0016020 membrane GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001046
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0005215 transporter activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001046
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Approved name mntH Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0007889
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Person Approved locus tag ECDH10B_2556 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu
Reference: Escherichia coli K-12 DH10B 		Feb 2008
Product
Person Approved product manganese/divalent cation transporter Published Annotation - PubMed ID: 16397293
Reference: Escherichia coli K-12 		Mar 2007
Protein Family
Automated Process Approved protein family IPR001046 NRAMP family Protein Sequence Similarity - InterPro Domain: IPR001046
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Other
Person Approved comment 100% identical to E. coli K-12 MG1655 feature ABE-0007889 Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0007889
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Gene Ontology
Automated Process Approved GO biological process GO:0006810 transport GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001046
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO cellular component GO:0016020 membrane GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001046
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0005215 transporter activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001046
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0001480 mntH CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0001639 mntH CDS
Ortholog
Automated Process Uncurated Go view Dickeya dadantii 3937 ABF-0046935 mntH CDS
Automated Process Uncurated Go view Erwinia tasmaniensis Et1/99 [T] AFI-0001162 mntH CDS
Automated Process Uncurated Go view Escherichia albertii TW07627 AFX-0003144 mntH CDS
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0009537 mntH CDS
Automated Process Uncurated Go view Escherichia coli 536 (UPEC) AEF-0002435 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0008840 mntH CDS
Automated Process Uncurated Go view Escherichia coli APEC O1 (APEC) AEG-0002365 mntH CDS
Automated Process Uncurated Go view Escherichia coli ATCC 8739 AEM-0006844 CDS
Automated Process Uncurated Go view Escherichia coli B171 (EPEC) ADN-0008263 mntH CDS
Automated Process Uncurated Go view Escherichia coli B7A (ETEC) ADK-0005518 MntH CDS
Automated Process Uncurated Go view Escherichia coli CFT073 (UPEC) ABR-0079069 mntH CDS
Automated Process Uncurated Go view Escherichia coli E110019 (EPEC) ADM-0008266 mntH CDS
Automated Process Uncurated Go view Escherichia coli E22 (EPEC) ADL-0006003 mntH CDS
Automated Process Uncurated Go view Escherichia coli E2348/69 (EPEC) BCI-0002735 mntH CDS
Automated Process Uncurated Go view Escherichia coli E24377A (ETEC) ADO-0007116 mntH CDS
Automated Process Uncurated Go view Escherichia coli EC4024 (EHEC) BBI-0005495 CDS
Automated Process Uncurated Go view Escherichia coli EC4042 (EHEC) BBA-0006965 mntH CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0005487 mntH CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0006928 mntH CDS
Automated Process Uncurated Go view Escherichia coli EC4113 (EHEC) BAY-0009546 mntH CDS
Automated Process Uncurated Go view Escherichia coli EC4115 (EHEC) BAS-0008463 mntH CDS
Automated Process Uncurated Go view Escherichia coli EC4196 (EHEC) BAX-0005473 mntH CDS
Automated Process Uncurated Go view Escherichia coli EC4206 (EHEC) BAW-0006250 mntH CDS
Automated Process Uncurated Go view Escherichia coli EC4401 (EHEC) BAV-0009343 mntH CDS
Automated Process Uncurated Go view Escherichia coli EC4486 (EHEC) BAU-0010373 mntH CDS
Automated Process Uncurated Go view Escherichia coli EC4501 (EHEC) BAT-0009136 mntH CDS
Automated Process Uncurated Go view Escherichia coli EC508 (EHEC) BBJ-0008453 mntH CDS
Automated Process Uncurated Go view Escherichia coli EC869 (EHEC) BBC-0007612 mntH CDS
Automated Process Uncurated Go view Escherichia coli EDL933 (EHEC) ABH-0027366 mntH CDS
Automated Process Uncurated Go view Escherichia coli F11 (UPEC) ADQ-0009011 mntH CDS
Automated Process Uncurated Go view Escherichia coli HS ADR-0007202 mntH CDS
Person Uncurated Go view Escherichia coli K-12 MG1655 ABE-0007889 mntH CDS
Automated Process Uncurated Go view Escherichia coli K-12 W3110 ADY-0002469 mntH CDS
Automated Process Uncurated Go view Escherichia coli SE11 AFS-0002730 CDS
Automated Process Uncurated Go view Escherichia coli SMS-3-5 AFT-0002542 mntH CDS
Automated Process Uncurated Go view Escherichia coli Sakai (EHEC) ACA-0133283 mntH CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0003587 CDS
Automated Process Uncurated Go view Escherichia coli UTI89 (UPEC) AEA-0002732 mntH CDS
Automated Process Uncurated Go view Pectobacterium atrosepticum SCRI1043 ABL-0061079 mntH CDS
Automated Process Uncurated Go view Pectobacterium brasiliensis 1692 AED-0003307 mntH CDS
Automated Process Uncurated Go view Pectobacterium carotovorum WPP14 ADT-0003546 mntH CDS
Automated Process Uncurated Go view Pectobacterium parmentieri WPP163 AFJ-0001295 mntH CDS
Automated Process Uncurated Go view Salmonella Agona SL483 BBX-0006719 CDS
Automated Process Uncurated Go view Salmonella Arizonae CDC 346-86 BCD-0000502 CDS
Automated Process Uncurated Go view Salmonella Choleraesuis SC-B67 ADB-0002816 mntH CDS
Automated Process Uncurated Go view Salmonella Dublin CT_02021853 BCB-0007033 CDS
Automated Process Uncurated Go view Salmonella Enteritidis P125109 BCF-0007748 mntH CDS
Automated Process Uncurated Go view Salmonella Gallinarum 287/91 BCG-0007360 mntH CDS
Automated Process Uncurated Go view Salmonella Hadar RI_05P066 BBT-0006114 CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL476 BBV-0007028 CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL486 BBW-0006329 CDS
Automated Process Uncurated Go view Salmonella Javiana GA_MM04042433 BCA-0006756 CDS
Automated Process Uncurated Go view Salmonella Kentucky CDC 191 BBZ-0004399 CDS
Automated Process Uncurated Go view Salmonella Kentucky CVM29188 BBP-0006153 CDS
Automated Process Uncurated Go view Salmonella Newport SL254 BBQ-0006962 CDS
Automated Process Uncurated Go view Salmonella Newport SL317 BBR-0007298 CDS
Automated Process Uncurated Go view Salmonella Paratyphi A AKU_12601 BCH-0000452 CDS
Automated Process Uncurated Go view Salmonella Paratyphi A ATCC 9150 ADA-0000452 mntH CDS
Automated Process Uncurated Go view Salmonella Paratyphi B SPB7 BCC-0000557 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA23 BBN-0007208 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA29 BBM-0004974 CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund CVM19633 BBO-0006718 CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund SL480 BBY-0006693 CDS
Automated Process Uncurated Go view Salmonella Typhi CT18 ABX-0110538 mntH CDS
Automated Process Uncurated Go view Salmonella Typhi Ty2 ABS-0082161 mntH CDS
Automated Process Uncurated Go view Salmonella Typhimurium LT2 [T] ABU-0097682 mntH CDS
Automated Process Uncurated Go view Salmonella Virchow SL491 BBS-0006867 CDS
Automated Process Uncurated Go view Salmonella Weltevreden SL484 BBU-0004371 CDS
Automated Process Uncurated Go view Salmonella enterica CVM23701 BBL-0007271 CDS
Automated Process Uncurated Go view Shigella boydii 227 ADV-0002671 CDS
Automated Process Uncurated Go view Shigella boydii BS512 ADJ-0008169 mntH CDS
Automated Process Uncurated Go view Shigella dysenteriae 1012 BAA-0005313 CDS
Automated Process Uncurated Go view Shigella dysenteriae 197 ADU-0002969 CDS
Automated Process Uncurated Go view Shigella flexneri 2457T ABQ-0073743 mntH CDS
Automated Process Uncurated Go view Shigella flexneri 301 ABT-0088714 mntH CDS
Automated Process Uncurated Go view Shigella flexneri 8401 BAG-0002621 CDS
Automated Process Uncurated Go view Shigella sonnei 046 ADD-0002719 mntH CDS
Automated Process Uncurated Go view Yersinia bercovieri ATCC 43970 [T] AEK-0003563 CDS
Automated Process Uncurated Go view Yersinia enterocolitica 8081 BAH-0003640 mntH CDS
Automated Process Uncurated Go view Yersinia frederiksenii ATCC 33641 [T] AEI-0000759 mntH CDS
Automated Process Uncurated Go view Yersinia intermedia ATCC 29909 [T] AEH-0001108 mntH CDS
Automated Process Uncurated Go view Yersinia mollaretii ATCC 43969 [T] AEJ-0002488 CDS
Automated Process Uncurated Go view Yersinia pestis 91001 (biovar Microtus) ACQ-0240564 mntH CDS
Automated Process Uncurated Go view Yersinia pestis Antiqua (biovar Antiqua) BAE-0002619 mntH CDS
Automated Process Uncurated Go view Yersinia pestis B42003004 (biovar Antiqua) BAL-0006227 mtnH CDS
Automated Process Uncurated Go view Yersinia pestis CA88-4125 (biovar Orientalis) BAF-0000527 mntH CDS
Automated Process Uncurated Go view Yersinia pestis CO92 (biovar Orientalis) ABY-0125272 mntH CDS
Automated Process Uncurated Go view Yersinia pestis E1979001 (biovar Antiqua) BAM-0007674 mtnH CDS
Automated Process Uncurated Go view Yersinia pestis F1991016 (biovar Orientalis) BAQ-0007134 mtnH CDS
Automated Process Uncurated Go view Yersinia pestis FV-1 (biovar Orientalis) BAK-0003196 CDS
Automated Process Uncurated Go view Yersinia pestis IP275 (biovar Orientalis) BAC-0008641 mtnH CDS
Automated Process Uncurated Go view Yersinia pestis K1973002 (biovar Mediaevalis) BAO-0005629 mtnH CDS
Automated Process Uncurated Go view Yersinia pestis KIM (biovar Mediaevalis) ABI-0031185 mntH CDS
Automated Process Uncurated Go view Yersinia pestis MG05-1020 (biovar Orientalis) BAP-0007038 mtnH CDS
Automated Process Uncurated Go view Yersinia pestis Nepal516 (biovar Antiqua) BAD-0001690 mntH CDS
Automated Process Uncurated Go view Yersinia pestis Pestoides F (biovar Pestoides) BAI-0002504 CDS
Automated Process Uncurated Go view Yersinia pestis UG05-0454 (biovar Antiqua) BAN-0005632 mtnH CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP31758 ADS-0005292 mtnH CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP32953 ACZ-0002794 mntH CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis PB1/+ AFV-0003349 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis YPIII AFW-0001686 CDS
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 2596255 to 2607493
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
AEC-0000001sourceforward14686137Contains
AEC-0002248ypdFCDScomplement25953342596419Downstream
AEC-0002249ypdGCDScomplement25964342597681Downstream
AEC-0002250ypdHCDScomplement25977032598029Downstream
AEC-0002251glkCDScomplement25982482599213Downstream
AEC-0002252yfeOCDSforward25994172600673Downstream
AEC-0002253ypeCCDSforward26007882601114Downstream
AEC-0002254mntHCDScomplement26012552602493Matches
AEC-0002255nupCCDSforward26028292604031Upstream
AEC-0000039IS186B.3repeat_regionforward26040632605401Upstream
AEC-0002256insL-3CDSforward26041182605230Upstream
AEC-0002257yfeACDScomplement26054302607619Upstream
Release Notes to toptop
submitted to GenBank; assigned accession number CP000948