Escherichia coli K-12 DH10B
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Working With: Genome: Escherichia coli K-12 DH10B Version: 10

AEC-0002271 (ptsH) - Escherichia coli K-12 DH10B - Feature Annotation

ASAP ID
AEC-0002271 showshow history
Names
ptsH ECDH10B_2580
Product
phosphohistidinoprotein-hexose phosphotransferase component of PTS system (Hpr)
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome forward 2623551 2623808 258 86
Sequence

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Context

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Pre-Run Search Results
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InterProScan
BLASTP
Protein Families to toptop
Author Approval Family Annotated
Automated Process Approved IPR001020 (IPR001020 Phosphotransferase system, HPr histidine phosphorylation site) Jul 2009
Automated Process Approved IPR002114 (IPR002114 Phosphotransferase system, HPr serine phosphorylation site) Jul 2009
Automated Process Approved IPR005698 (IPR005698 (DEPRECATED) Phosphotransferase system, phosphocarrier HPr protein) Jul 2009
Automated Process Approved IPR000032 (IPR000032 Phosphocarrier protein HPr-like) Jul 2009
Protein Domains to toptop
Internal error getting result
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Automated Process Approved GO biological process GO:0006810 transport GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001020
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO biological process GO:0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001020
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0005351 carbohydrate:proton symporter activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001020
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Approved name ptsH Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0007962
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Person Approved locus tag ECDH10B_2580 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu
Reference: Escherichia coli K-12 DH10B 		Feb 2008
Product
Person Approved product phosphohistidinoprotein-hexose phosphotransferase component of PTS system (Hpr) Published Annotation - PubMed ID: 16397293
Reference: Escherichia coli K-12 		Mar 2007
Protein Family
Automated Process Approved protein family IPR002114 Phosphotransferase system, HPr serine phosphorylation site Protein Sequence Similarity - InterPro Domain: IPR002114
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR001020 Phosphotransferase system, HPr histidine phosphorylation site Protein Sequence Similarity - InterPro Domain: IPR001020
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR005698 (DEPRECATED) Phosphotransferase system, phosphocarrier HPr protein Protein Sequence Similarity - InterPro Domain: IPR005698
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR000032 Phosphocarrier protein HPr-like Protein Sequence Similarity - InterPro Domain: IPR000032
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Other
Person Approved comment 100% identical to E. coli K-12 MG1655 feature ABE-0007962 Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0007962
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Gene Ontology
Automated Process Approved GO biological process GO:0006810 transport GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001020
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO biological process GO:0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001020
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0005351 carbohydrate:proton symporter activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001020
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0000797 ptsH CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0000632 ptsH CDS
Ortholog
Automated Process Uncurated Go view Dickeya dadantii 3937 ABF-0016785 ptsH CDS
Automated Process Uncurated Go view Erwinia tasmaniensis Et1/99 [T] AFI-0001144 ptsH CDS
Automated Process Uncurated Go view Escherichia albertii TW07627 AFX-0003112 ptsH CDS
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0006842 ptsH CDS
Automated Process Uncurated Go view Escherichia coli 536 (UPEC) AEF-0002459 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0008810 ptsH CDS
Automated Process Uncurated Go view Escherichia coli APEC O1 (APEC) AEG-0005333 CDS
Automated Process Uncurated Go view Escherichia coli ATCC 8739 AEM-0006821 CDS
Automated Process Uncurated Go view Escherichia coli B7A (ETEC) ADK-0009465 CDS
Automated Process Uncurated Go view Escherichia coli CFT073 (UPEC) ABR-0079094 ptsH CDS
Automated Process Uncurated Go view Escherichia coli E110019 (EPEC) ADM-0009925 ptsH CDS
Automated Process Uncurated Go view Escherichia coli E22 (EPEC) ADL-0008479 ptsH CDS
Automated Process Uncurated Go view Escherichia coli E2348/69 (EPEC) BCI-0002758 ptsH CDS
Automated Process Uncurated Go view Escherichia coli E24377A (ETEC) ADO-0007136 ptsH CDS
Automated Process Uncurated Go view Escherichia coli EC4042 (EHEC) BBA-0006989 ptsH CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0005510 ptsH CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0004984 ptsH CDS
Automated Process Uncurated Go view Escherichia coli EC4113 (EHEC) BAY-0006682 ptsH CDS
Automated Process Uncurated Go view Escherichia coli EC4115 (EHEC) BAS-0008486 ptsH CDS
Automated Process Uncurated Go view Escherichia coli EC4196 (EHEC) BAX-0006331 ptsH CDS
Automated Process Uncurated Go view Escherichia coli EC4206 (EHEC) BAW-0006278 ptsH CDS
Automated Process Uncurated Go view Escherichia coli EC4486 (EHEC) BAU-0007935 ptsH CDS
Automated Process Uncurated Go view Escherichia coli EC4501 (EHEC) BAT-0010765 ptsH CDS
Automated Process Uncurated Go view Escherichia coli EC869 (EHEC) BBC-0008061 ptsH CDS
Automated Process Uncurated Go view Escherichia coli EDL933 (EHEC) ABH-0027389 ptsH CDS
Automated Process Uncurated Go view Escherichia coli F11 (UPEC) ADQ-0008016 ptsH CDS
Automated Process Uncurated Go view Escherichia coli HS ADR-0007223 ptsH CDS
Person Uncurated Go view Escherichia coli K-12 MG1655 ABE-0007962 ptsH CDS
Automated Process Uncurated Go view Escherichia coli K-12 W3110 ADY-0002493 ptsH CDS
Automated Process Uncurated Go view Escherichia coli SE11 AFS-0002754 CDS
Automated Process Uncurated Go view Escherichia coli SMS-3-5 AFT-0002569 ptsH CDS
Automated Process Uncurated Go view Escherichia coli Sakai (EHEC) ACA-0133306 ptsH CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0003606 CDS
Automated Process Uncurated Go view Escherichia coli UTI89 (UPEC) AEA-0002757 ptsH CDS
Automated Process Uncurated Go view Pectobacterium atrosepticum SCRI1043 ABL-0061128 ptsH CDS
Automated Process Uncurated Go view Pectobacterium brasiliensis 1692 AED-0000497 ptsH CDS
Automated Process Uncurated Go view Pectobacterium parmentieri WPP163 AFJ-0001346 ptsH CDS
Automated Process Uncurated Go view Salmonella Agona SL483 BBX-0006744 ptsH CDS
Automated Process Uncurated Go view Salmonella Arizonae CDC 346-86 BCD-0000473 CDS
Automated Process Uncurated Go view Salmonella Choleraesuis SC-B67 ADB-0002842 ptsH CDS
Automated Process Uncurated Go view Salmonella Dublin CT_02021853 BCB-0007058 ptsH CDS
Automated Process Uncurated Go view Salmonella Enteritidis P125109 BCF-0007817 ptsH CDS
Automated Process Uncurated Go view Salmonella Gallinarum 287/91 BCG-0007423 ptsH CDS
Automated Process Uncurated Go view Salmonella Hadar RI_05P066 BBT-0006088 ptsH CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL476 BBV-0007053 ptsH CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL486 BBW-0006935 ptsH CDS
Automated Process Uncurated Go view Salmonella Javiana GA_MM04042433 BCA-0007128 ptsH CDS
Automated Process Uncurated Go view Salmonella Kentucky CDC 191 BBZ-0006402 ptsH CDS
Automated Process Uncurated Go view Salmonella Kentucky CVM29188 BBP-0006177 ptsH CDS
Automated Process Uncurated Go view Salmonella Newport SL254 BBQ-0006987 ptsH CDS
Automated Process Uncurated Go view Salmonella Newport SL317 BBR-0008150 ptsH CDS
Automated Process Uncurated Go view Salmonella Paratyphi A AKU_12601 BCH-0000434 CDS
Automated Process Uncurated Go view Salmonella Paratyphi A ATCC 9150 ADA-0000434 ptsH CDS
Automated Process Uncurated Go view Salmonella Paratyphi B SPB7 BCC-0000529 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA23 BBN-0007233 ptsH CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA29 BBM-0004949 ptsH CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund CVM19633 BBO-0006743 ptsH CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund SL480 BBY-0008102 ptsH CDS
Automated Process Uncurated Go view Salmonella Typhi CT18 ABX-0110588 ptsH CDS
Automated Process Uncurated Go view Salmonella Typhi Ty2 ABS-0082138 ptsH CDS
Automated Process Uncurated Go view Salmonella Typhimurium LT2 [T] ABU-0097747 ptsH CDS
Automated Process Uncurated Go view Salmonella Virchow SL491 BBS-0006842 ptsH CDS
Automated Process Uncurated Go view Salmonella Weltevreden SL484 BBU-0004344 ptsH CDS
Automated Process Uncurated Go view Salmonella enterica CVM23701 BBL-0006032 ptsH CDS
Automated Process Uncurated Go view Shigella boydii 227 ADV-0002694 ptsH CDS
Automated Process Uncurated Go view Shigella boydii BS512 ADJ-0008174 ptsH CDS
Automated Process Uncurated Go view Shigella dysenteriae 1012 BAA-0004344 ptsH CDS
Automated Process Uncurated Go view Shigella dysenteriae 197 ADU-0002996 ptsH CDS
Automated Process Uncurated Go view Shigella flexneri 2457T ABQ-0073762 ptsH CDS
Automated Process Uncurated Go view Shigella flexneri 301 ABT-0088731 ptsH CDS
Automated Process Uncurated Go view Shigella flexneri 8401 BAG-0002639 ptsH CDS
Automated Process Uncurated Go view Shigella sonnei 046 ADD-0002739 ptsH CDS
Automated Process Uncurated Go view Yersinia bercovieri ATCC 43970 [T] AEK-0002934 CDS
Automated Process Uncurated Go view Yersinia enterocolitica 8081 BAH-0003603 hpr CDS
Automated Process Uncurated Go view Yersinia frederiksenii ATCC 33641 [T] AEI-0001440 hpr CDS
Automated Process Uncurated Go view Yersinia intermedia ATCC 29909 [T] AEH-0001118 ptsH CDS
Automated Process Uncurated Go view Yersinia mollaretii ATCC 43969 [T] AEJ-0002810 CDS
Automated Process Uncurated Go view Yersinia pestis 91001 (biovar Microtus) ACQ-0240609 ptsH CDS
Automated Process Uncurated Go view Yersinia pestis Angola (biovar Pestoides) ADI-0006863 CDS
Automated Process Uncurated Go view Yersinia pestis Antiqua (biovar Antiqua) BAE-0002636 ptsH CDS
Automated Process Uncurated Go view Yersinia pestis B42003004 (biovar Antiqua) BAL-0006244 CDS
Automated Process Uncurated Go view Yersinia pestis CA88-4125 (biovar Orientalis) BAF-0000516 ptsH CDS
Automated Process Uncurated Go view Yersinia pestis CO92 (biovar Orientalis) ABY-0125329 ptsH CDS
Automated Process Uncurated Go view Yersinia pestis E1979001 (biovar Antiqua) BAM-0007657 CDS
Automated Process Uncurated Go view Yersinia pestis F1991016 (biovar Orientalis) BAQ-0007118 CDS
Automated Process Uncurated Go view Yersinia pestis IP275 (biovar Orientalis) BAC-0004954 CDS
Automated Process Uncurated Go view Yersinia pestis K1973002 (biovar Mediaevalis) BAO-0005646 CDS
Automated Process Uncurated Go view Yersinia pestis KIM (biovar Mediaevalis) ABI-0031166 ptsH CDS
Automated Process Uncurated Go view Yersinia pestis MG05-1020 (biovar Orientalis) BAP-0007021 CDS
Automated Process Uncurated Go view Yersinia pestis Nepal516 (biovar Antiqua) BAD-0001672 ptsH CDS
Automated Process Uncurated Go view Yersinia pestis Pestoides F (biovar Pestoides) BAI-0002522 CDS
Automated Process Uncurated Go view Yersinia pestis UG05-0454 (biovar Antiqua) BAN-0005617 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP31758 ADS-0005276 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP32953 ACZ-0002810 ptsH CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis PB1/+ AFV-0003366 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis YPIII AFW-0001669 CDS
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 2618551 to 2628808
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
AEC-0000001sourceforward14686137Contains
AEC-0002267ligACDScomplement26179482619963Upstream
AEC-0002268zipACDScomplement26200342621020Upstream
AEC-0002269cysZCDSforward26212502622011Upstream
AEC-0002270cysKCDSforward26221962623167Upstream
AEC-0002271ptsHCDSforward26235512623808Matches
AEC-0002272ptsICDSforward26238532625580Downstream
AEC-0002273crrCDSforward26256212626130Downstream
AEC-0002274pdxKCDScomplement26261732627024Downstream
AEC-0002275yfeKCDSforward26271292627503Downstream
AEC-0002276yfeSCDSforward26275362628270Downstream
AEC-0002277cysMCDScomplement26284592629370Downstream
Release Notes to toptop
submitted to GenBank; assigned accession number CP000948