Escherichia coli K-12 DH10B
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Working With: Genome: Escherichia coli K-12 DH10B Version: 10

AEC-0002278 (cysA) - Escherichia coli K-12 DH10B - Feature Annotation

ASAP ID
AEC-0002278 showshow history
Names
cysA ECDH10B_2587
Product
sulfate/thiosulfate transporter subunit; ATP-binding component of ABC superfamily
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome complement 2629504 2630601 1098 366
Sequence

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Context

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Pre-Run Search Results
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InterProScan
BLASTP
Protein Families to toptop
Author Approval Family Annotated
Automated Process Approved IPR003593 (IPR003593 AAA+ ATPase domain) Jul 2009
Automated Process Approved IPR005666 (IPR005666 Sulphate transport system permease protein 1) Jul 2009
Automated Process Approved IPR003439 (IPR003439 ABC transporter-like) Jul 2009
Automated Process Approved IPR008995 (IPR008995 Molybdate/tungstate binding, C-terminal) Jul 2009
Protein Domains to toptop
Internal error getting result
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Automated Process Approved GO biological process GO:0006810 transport GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR005666
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO cellular component GO:0016020 membrane GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR005666
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0005215 transporter activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR008995
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0016820 (DEPRECATED) hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR008995
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0017111 nucleoside-triphosphatase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR003593
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0000166 nucleotide binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR003593
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0042626 ATPase-coupled transmembrane transporter activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR005666
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Approved name cysA Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0007986
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Person Approved locus tag ECDH10B_2587 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu
Reference: Escherichia coli K-12 DH10B 		Feb 2008
Product
Person Approved product sulfate/thiosulfate transporter subunit; ATP-binding component of ABC superfamily Published Annotation - PubMed ID: 16397293
Reference: Escherichia coli K-12 		Mar 2007
Protein Family
Automated Process Approved protein family IPR003593 AAA+ ATPase domain Protein Sequence Similarity - InterPro Domain: IPR003593
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR005666 Sulphate transport system permease protein 1 Protein Sequence Similarity - InterPro Domain: IPR005666
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR003439 ABC transporter-like Protein Sequence Similarity - InterPro Domain: IPR003439
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR008995 Molybdate/tungstate binding, C-terminal Protein Sequence Similarity - InterPro Domain: IPR008995
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Other
Person Approved comment 100% identical to E. coli K-12 MG1655 feature ABE-0007986 Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0007986
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Gene Ontology
Automated Process Approved GO biological process GO:0006810 transport GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR005666
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO cellular component GO:0016020 membrane GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR005666
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0000166 nucleotide binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR003593
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0017111 nucleoside-triphosphatase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR003593
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0005215 transporter activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR008995
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0016820 (DEPRECATED) hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR008995
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0042626 ATPase-coupled transmembrane transporter activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR005666
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0001224 cysA CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0001155 cysA CDS
Ortholog
Automated Process Uncurated Go view Dickeya dadantii 3937 ABF-0019861 cysA CDS
Automated Process Uncurated Go view Erwinia tasmaniensis Et1/99 [T] AFI-0001138 cysA CDS
Automated Process Uncurated Go view Escherichia albertii TW07627 AFX-0003103 cysA CDS
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0006834 cysA CDS
Automated Process Uncurated Go view Escherichia coli 536 (UPEC) AEF-0002465 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0008802 cysA CDS
Automated Process Uncurated Go view Escherichia coli APEC O1 (APEC) AEG-0002386 cysA CDS
Automated Process Uncurated Go view Escherichia coli ATCC 8739 AEM-0006814 CDS
Automated Process Uncurated Go view Escherichia coli B171 (EPEC) ADN-0006732 cysA CDS
Automated Process Uncurated Go view Escherichia coli CFT073 (UPEC) ABR-0079100 cysA CDS
Automated Process Uncurated Go view Escherichia coli E110019 (EPEC) ADM-0009919 cysA CDS
Automated Process Uncurated Go view Escherichia coli E22 (EPEC) ADL-0008485 cysA CDS
Automated Process Uncurated Go view Escherichia coli E2348/69 (EPEC) BCI-0002764 cysA CDS
Automated Process Uncurated Go view Escherichia coli E24377A (ETEC) ADO-0007142 cysA CDS
Automated Process Uncurated Go view Escherichia coli EC4024 (EHEC) BBI-0000765 CDS
Automated Process Uncurated Go view Escherichia coli EC4042 (EHEC) BBA-0006995 cysA CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0005516 cysA CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0004990 cysA CDS
Automated Process Uncurated Go view Escherichia coli EC4113 (EHEC) BAY-0006676 cysA CDS
Automated Process Uncurated Go view Escherichia coli EC4115 (EHEC) BAS-0008492 cysA CDS
Automated Process Uncurated Go view Escherichia coli EC4196 (EHEC) BAX-0006325 cysA CDS
Automated Process Uncurated Go view Escherichia coli EC4206 (EHEC) BAW-0006284 cysA CDS
Automated Process Uncurated Go view Escherichia coli EC4401 (EHEC) BAV-0008143 cysA CDS
Automated Process Uncurated Go view Escherichia coli EC4486 (EHEC) BAU-0007941 cysA CDS
Automated Process Uncurated Go view Escherichia coli EC4501 (EHEC) BAT-0010771 cysA CDS
Automated Process Uncurated Go view Escherichia coli EC508 (EHEC) BBJ-0006540 cysA CDS
Automated Process Uncurated Go view Escherichia coli EC869 (EHEC) BBC-0008067 cysA CDS
Automated Process Uncurated Go view Escherichia coli EDL933 (EHEC) ABH-0027395 cysA CDS
Automated Process Uncurated Go view Escherichia coli F11 (UPEC) ADQ-0008022 cysA_1 CDS
Automated Process Uncurated Go view Escherichia coli HS ADR-0007231 cysA CDS
Person Uncurated Go view Escherichia coli K-12 MG1655 ABE-0007986 cysA CDS
Automated Process Uncurated Go view Escherichia coli K-12 W3110 ADY-0002500 cysA CDS
Automated Process Uncurated Go view Escherichia coli SE11 AFS-0002760 CDS
Automated Process Uncurated Go view Escherichia coli SMS-3-5 AFT-0002576 cysA CDS
Automated Process Uncurated Go view Escherichia coli Sakai (EHEC) ACA-0133312 cysA CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0003612 CDS
Automated Process Uncurated Go view Escherichia coli UTI89 (UPEC) AEA-0002763 cysA CDS
Automated Process Uncurated Go view Pectobacterium atrosepticum SCRI1043 ABL-0063591 cysA CDS
Automated Process Uncurated Go view Pectobacterium brasiliensis 1692 AED-0001880 cysA CDS
Automated Process Uncurated Go view Pectobacterium carotovorum WPP14 ADT-0004128 cysA CDS
Automated Process Uncurated Go view Pectobacterium parmentieri WPP163 AFJ-0004057 cysA CDS
Automated Process Uncurated Go view Salmonella Agona SL483 BBX-0006754 cysA CDS
Automated Process Uncurated Go view Salmonella Arizonae CDC 346-86 BCD-0000462 CDS
Automated Process Uncurated Go view Salmonella Choleraesuis SC-B67 ADB-0002854 cysA CDS
Automated Process Uncurated Go view Salmonella Dublin CT_02021853 BCB-0007068 cysA CDS
Automated Process Uncurated Go view Salmonella Enteritidis P125109 BCF-0007850 cysA CDS
Automated Process Uncurated Go view Salmonella Gallinarum 287/91 BCG-0007456 cysA CDS
Automated Process Uncurated Go view Salmonella Hadar RI_05P066 BBT-0006079 cysA CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL476 BBV-0007063 cysA CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL486 BBW-0006945 cysA CDS
Automated Process Uncurated Go view Salmonella Javiana GA_MM04042433 BCA-0007118 cysA CDS
Automated Process Uncurated Go view Salmonella Kentucky CDC 191 BBZ-0006411 cysA CDS
Automated Process Uncurated Go view Salmonella Kentucky CVM29188 BBP-0006186 cysA CDS
Automated Process Uncurated Go view Salmonella Newport SL254 BBQ-0006997 cysA CDS
Automated Process Uncurated Go view Salmonella Newport SL317 BBR-0008140 cysA CDS
Automated Process Uncurated Go view Salmonella Paratyphi A AKU_12601 BCH-0000426 CDS
Automated Process Uncurated Go view Salmonella Paratyphi A ATCC 9150 ADA-0000425 cysA CDS
Automated Process Uncurated Go view Salmonella Paratyphi B SPB7 BCC-0000519 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA23 BBN-0007242 cysA CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA29 BBM-0004939 cysA CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund CVM19633 BBO-0006753 cysA CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund SL480 BBY-0007471 CDS
Automated Process Uncurated Go view Salmonella Typhi CT18 ABX-0110615 cysA CDS
Automated Process Uncurated Go view Salmonella Typhi Ty2 ABS-0082129 cysA CDS
Automated Process Uncurated Go view Salmonella Typhimurium LT2 [T] ABU-0097776 cysA CDS
Automated Process Uncurated Go view Salmonella Virchow SL491 BBS-0006831 cysA CDS
Automated Process Uncurated Go view Salmonella Weltevreden SL484 BBU-0004334 cysA CDS
Automated Process Uncurated Go view Salmonella enterica CVM23701 BBL-0006042 cysA CDS
Automated Process Uncurated Go view Shigella boydii 227 ADV-0002703 cysA CDS
Automated Process Uncurated Go view Shigella boydii BS512 ADJ-0008203 cysA CDS
Automated Process Uncurated Go view Shigella dysenteriae 1012 BAA-0004351 cysA CDS
Automated Process Uncurated Go view Shigella dysenteriae 197 ADU-0003002 cysA CDS
Automated Process Uncurated Go view Shigella flexneri 2457T ABQ-0073771 cysA CDS
Automated Process Uncurated Go view Shigella flexneri 301 ABT-0286425 cysA CDS
Automated Process Uncurated Go view Shigella flexneri 8401 BAG-0002647 cysA CDS
Automated Process Uncurated Go view Shigella sonnei 046 ADD-0002747 cysA CDS
Automated Process Uncurated Go view Yersinia bercovieri ATCC 43970 [T] AEK-0003573 CDS
Automated Process Uncurated Go view Yersinia enterocolitica 8081 BAH-0003565 cysA CDS
Automated Process Uncurated Go view Yersinia frederiksenii ATCC 33641 [T] AEI-0001448 cysA CDS
Automated Process Uncurated Go view Yersinia intermedia ATCC 29909 [T] AEH-0003157 cysA CDS
Automated Process Uncurated Go view Yersinia mollaretii ATCC 43969 [T] AEJ-0002795 CDS
Automated Process Uncurated Go view Yersinia pestis 91001 (biovar Microtus) ACQ-0240654 cysA CDS
Automated Process Uncurated Go view Yersinia pestis Angola (biovar Pestoides) ADI-0006881 cysA CDS
Automated Process Uncurated Go view Yersinia pestis Antiqua (biovar Antiqua) BAE-0002657 cysA CDS
Automated Process Uncurated Go view Yersinia pestis B42003004 (biovar Antiqua) BAL-0006263 cysA CDS
Automated Process Uncurated Go view Yersinia pestis CA88-4125 (biovar Orientalis) BAF-0000499 cysA CDS
Automated Process Uncurated Go view Yersinia pestis CO92 (biovar Orientalis) ABY-0125400 cysA CDS
Automated Process Uncurated Go view Yersinia pestis E1979001 (biovar Antiqua) BAM-0007639 cysA CDS
Automated Process Uncurated Go view Yersinia pestis F1991016 (biovar Orientalis) BAQ-0007101 cysA CDS
Automated Process Uncurated Go view Yersinia pestis FV-1 (biovar Orientalis) BAK-0001097 CDS
Automated Process Uncurated Go view Yersinia pestis IP275 (biovar Orientalis) BAC-0004972 cysA CDS
Automated Process Uncurated Go view Yersinia pestis K1973002 (biovar Mediaevalis) BAO-0005665 cysA CDS
Automated Process Uncurated Go view Yersinia pestis KIM (biovar Mediaevalis) ABI-0031146 cysA CDS
Automated Process Uncurated Go view Yersinia pestis MG05-1020 (biovar Orientalis) BAP-0008754 cysA CDS
Automated Process Uncurated Go view Yersinia pestis Nepal516 (biovar Antiqua) BAD-0001651 cysA CDS
Automated Process Uncurated Go view Yersinia pestis Pestoides F (biovar Pestoides) BAI-0002543 CDS
Automated Process Uncurated Go view Yersinia pestis UG05-0454 (biovar Antiqua) BAN-0005599 cysA CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP31758 ADS-0005261 cysA CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP32953 ACZ-0002827 cysA CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis PB1/+ AFV-0003387 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis YPIII AFW-0001648 CDS
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 2624504 to 2635601
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
AEC-0000001sourceforward14686137Contains
AEC-0002272ptsICDSforward26238532625580Downstream
AEC-0002273crrCDSforward26256212626130Downstream
AEC-0002274pdxKCDScomplement26261732627024Downstream
AEC-0002275yfeKCDSforward26271292627503Downstream
AEC-0002276yfeSCDSforward26275362628270Downstream
AEC-0002277cysMCDScomplement26284592629370Downstream
AEC-0002278cysACDScomplement26295042630601Matches
AEC-0002279cysWCDScomplement26305912631466Overlaps Upstream
AEC-0002280cysUCDScomplement26314662632299Upstream
AEC-0002281cysPCDScomplement26322992633315Upstream
AEC-0002282ucpACDScomplement26336192634410Upstream
AEC-0002283yfeTCDScomplement26345392635396Upstream
AEC-0002284yfeUCDSforward26355602636456Upstream
Release Notes to toptop
submitted to GenBank; assigned accession number CP000948