Escherichia coli K-12 DH10B
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Working With: Genome: Escherichia coli K-12 DH10B Version: 10

AEC-0002332 (purC) - Escherichia coli K-12 DH10B - Feature Annotation

ASAP ID
AEC-0002332 showshow history
Names
purC ECDH10B_2642
Product
phosphoribosylaminoimidazole-succinocarboxamide synthetase
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome complement 2686692 2687405 714 238
Sequence

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Context

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Pre-Run Search Results
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InterProScan
BLASTP
Protein Families to toptop
Author Approval Family Annotated
Automated Process Approved IPR001636 (IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase) Jul 2009
Automated Process Approved IPR013816 (IPR013816 (DEPRECATED) ATP-grasp fold, subdomain 2) Jul 2009
Protein Domains to toptop
Internal error getting result
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Automated Process Approved GO molecular function GO:0005524 ATP binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR013816
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0003824 catalytic activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR013816
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Approved name purC Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0008156
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Person Approved locus tag ECDH10B_2642 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu
Reference: Escherichia coli K-12 DH10B 		Feb 2008
Product
Person Approved product phosphoribosylaminoimidazole-succinocarboxamide synthetase Published Annotation - PubMed ID: 16397293
Reference: Escherichia coli K-12 		Mar 2007
Protein Family
Automated Process Approved protein family IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase Protein Sequence Similarity - InterPro Domain: IPR001636
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR013816 (DEPRECATED) ATP-grasp fold, subdomain 2 Protein Sequence Similarity - InterPro Domain: IPR013816
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Other
Person Approved comment 100% identical to E. coli K-12 MG1655 feature ABE-0008156 Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0008156
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Gene Ontology
Automated Process Approved GO molecular function GO:0003824 catalytic activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR013816
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0005524 ATP binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR013816
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0000795 purC CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0000825 purC CDS
Ortholog
Automated Process Uncurated Go view Dickeya dadantii 3937 ABF-0018360 purC CDS
Automated Process Uncurated Go view Erwinia tasmaniensis Et1/99 [T] AFI-0001113 purC CDS
Automated Process Uncurated Go view Escherichia albertii TW07627 AFX-0003071 purC CDS
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0006788 purC CDS
Automated Process Uncurated Go view Escherichia coli 536 (UPEC) AEF-0002510 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0008753 purC CDS
Automated Process Uncurated Go view Escherichia coli APEC O1 (APEC) AEG-0002430 purC CDS
Automated Process Uncurated Go view Escherichia coli ATCC 8739 AEM-0006749 CDS
Automated Process Uncurated Go view Escherichia coli B171 (EPEC) ADN-0006781 purC CDS
Automated Process Uncurated Go view Escherichia coli B7A (ETEC) ADK-0007919 purC pseudogene
Automated Process Uncurated Go view Escherichia coli CFT073 (UPEC) ABR-0079148 purC CDS
Automated Process Uncurated Go view Escherichia coli E110019 (EPEC) ADM-0006761 purC CDS
Automated Process Uncurated Go view Escherichia coli E22 (EPEC) ADL-0008534 purC CDS
Automated Process Uncurated Go view Escherichia coli E2348/69 (EPEC) BCI-0002873 purC CDS
Automated Process Uncurated Go view Escherichia coli E24377A (ETEC) ADO-0007191 purC CDS
Automated Process Uncurated Go view Escherichia coli EC4024 (EHEC) BBI-0000815 CDS
Automated Process Uncurated Go view Escherichia coli EC4042 (EHEC) BBA-0007041 purC CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0005562 purC CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0005036 purC CDS
Automated Process Uncurated Go view Escherichia coli EC4113 (EHEC) BAY-0006630 purC CDS
Automated Process Uncurated Go view Escherichia coli EC4115 (EHEC) BAS-0008538 purC CDS
Automated Process Uncurated Go view Escherichia coli EC4196 (EHEC) BAX-0006279 purC CDS
Automated Process Uncurated Go view Escherichia coli EC4206 (EHEC) BAW-0006330 purC CDS
Automated Process Uncurated Go view Escherichia coli EC4401 (EHEC) BAV-0008189 purC CDS
Automated Process Uncurated Go view Escherichia coli EC4486 (EHEC) BAU-0007987 purC CDS
Automated Process Uncurated Go view Escherichia coli EC4501 (EHEC) BAT-0006669 purC CDS
Automated Process Uncurated Go view Escherichia coli EC508 (EHEC) BBJ-0006586 purC CDS
Automated Process Uncurated Go view Escherichia coli EC869 (EHEC) BBC-0008114 purC CDS
Automated Process Uncurated Go view Escherichia coli EDL933 (EHEC) ABH-0027442 purC CDS
Automated Process Uncurated Go view Escherichia coli F11 (UPEC) ADQ-0008066 purC CDS
Automated Process Uncurated Go view Escherichia coli HS ADR-0007280 purC CDS
Person Uncurated Go view Escherichia coli K-12 MG1655 ABE-0008156 purC CDS
Automated Process Uncurated Go view Escherichia coli K-12 W3110 ADY-0002546 purC CDS
Automated Process Uncurated Go view Escherichia coli SE11 AFS-0002808 CDS
Automated Process Uncurated Go view Escherichia coli SMS-3-5 AFT-0002622 purC CDS
Automated Process Uncurated Go view Escherichia coli Sakai (EHEC) ACA-0133357 purC CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0003662 CDS
Automated Process Uncurated Go view Escherichia coli UTI89 (UPEC) AEA-0002811 purC CDS
Automated Process Uncurated Go view Pectobacterium atrosepticum SCRI1043 ABL-0061510 purC CDS
Automated Process Uncurated Go view Pectobacterium brasiliensis 1692 AED-0000684 purC CDS
Automated Process Uncurated Go view Pectobacterium carotovorum WPP14 ADT-0000317 purC CDS
Automated Process Uncurated Go view Pectobacterium parmentieri WPP163 AFJ-0001135 purC CDS
Automated Process Uncurated Go view Salmonella Agona SL483 BBX-0006799 purC CDS
Automated Process Uncurated Go view Salmonella Arizonae CDC 346-86 BCD-0000409 CDS
Automated Process Uncurated Go view Salmonella Choleraesuis SC-B67 ADB-0002914 purC CDS
Automated Process Uncurated Go view Salmonella Dublin CT_02021853 BCB-0007114 purC CDS
Automated Process Uncurated Go view Salmonella Enteritidis P125109 BCF-0007998 purC CDS
Automated Process Uncurated Go view Salmonella Gallinarum 287/91 BCG-0007593 purC CDS
Automated Process Uncurated Go view Salmonella Hadar RI_05P066 BBT-0006034 purC CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL476 BBV-0007108 purC CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL486 BBW-0006992 purC CDS
Automated Process Uncurated Go view Salmonella Javiana GA_MM04042433 BCA-0007075 purC CDS
Automated Process Uncurated Go view Salmonella Kentucky CDC 191 BBZ-0006457 purC CDS
Automated Process Uncurated Go view Salmonella Kentucky CVM29188 BBP-0006232 purC CDS
Automated Process Uncurated Go view Salmonella Newport SL254 BBQ-0007042 purC CDS
Automated Process Uncurated Go view Salmonella Newport SL317 BBR-0008094 purC CDS
Automated Process Uncurated Go view Salmonella Paratyphi A AKU_12601 BCH-0000383 CDS
Automated Process Uncurated Go view Salmonella Paratyphi A ATCC 9150 ADA-0000382 purC CDS
Automated Process Uncurated Go view Salmonella Paratyphi B SPB7 BCC-0000468 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA23 BBN-0007288 purC CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA29 BBM-0004894 purC CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund CVM19633 BBO-0006796 purC CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund SL480 BBY-0007428 purC CDS
Automated Process Uncurated Go view Salmonella Typhi CT18 ABX-0110739 purC CDS
Automated Process Uncurated Go view Salmonella Typhi Ty2 ABS-0082084 purC CDS
Automated Process Uncurated Go view Salmonella Typhimurium LT2 [T] ABU-0097908 purC CDS
Automated Process Uncurated Go view Salmonella Virchow SL491 BBS-0006787 purC CDS
Automated Process Uncurated Go view Salmonella Weltevreden SL484 BBU-0004289 purC CDS
Automated Process Uncurated Go view Salmonella enterica CVM23701 BBL-0006089 purC CDS
Automated Process Uncurated Go view Shigella boydii 227 ADV-0002750 purC CDS
Automated Process Uncurated Go view Shigella boydii BS512 ADJ-0008256 purC CDS
Automated Process Uncurated Go view Shigella dysenteriae 1012 BAA-0004400 purC CDS
Automated Process Uncurated Go view Shigella dysenteriae 197 ADU-0003054 purC CDS
Automated Process Uncurated Go view Shigella flexneri 2457T ABQ-0073819 purC CDS
Automated Process Uncurated Go view Shigella flexneri 301 ABT-0088776 purC CDS
Automated Process Uncurated Go view Shigella flexneri 8401 BAG-0002696 purC CDS
Automated Process Uncurated Go view Shigella sonnei 046 ADD-0002793 purC CDS
Automated Process Uncurated Go view Yersinia bercovieri ATCC 43970 [T] AEK-0000803 CDS
Automated Process Uncurated Go view Yersinia enterocolitica 8081 BAH-0003409 purC CDS
Automated Process Uncurated Go view Yersinia frederiksenii ATCC 33641 [T] AEI-0001484 purC CDS
Automated Process Uncurated Go view Yersinia intermedia ATCC 29909 [T] AEH-0003189 purC CDS
Automated Process Uncurated Go view Yersinia mollaretii ATCC 43969 [T] AEJ-0002859 CDS
Automated Process Uncurated Go view Yersinia pestis 91001 (biovar Microtus) ACQ-0240790 purC CDS
Automated Process Uncurated Go view Yersinia pestis Angola (biovar Pestoides) ADI-0007254 purC CDS
Automated Process Uncurated Go view Yersinia pestis Antiqua (biovar Antiqua) BAE-0002717 purC CDS
Automated Process Uncurated Go view Yersinia pestis B42003004 (biovar Antiqua) BAL-0006313 purC CDS
Automated Process Uncurated Go view Yersinia pestis CA88-4125 (biovar Orientalis) BAF-0000455 purC CDS
Automated Process Uncurated Go view Yersinia pestis CO92 (biovar Orientalis) ABY-0125574 purC CDS
Automated Process Uncurated Go view Yersinia pestis E1979001 (biovar Antiqua) BAM-0007589 purC CDS
Automated Process Uncurated Go view Yersinia pestis F1991016 (biovar Orientalis) BAQ-0007054 purC CDS
Automated Process Uncurated Go view Yersinia pestis FV-1 (biovar Orientalis) BAK-0003108 CDS
Automated Process Uncurated Go view Yersinia pestis IP275 (biovar Orientalis) BAC-0005019 purC CDS
Automated Process Uncurated Go view Yersinia pestis K1973002 (biovar Mediaevalis) BAO-0005715 purC CDS
Automated Process Uncurated Go view Yersinia pestis KIM (biovar Mediaevalis) ABI-0031098 purC CDS
Automated Process Uncurated Go view Yersinia pestis MG05-1020 (biovar Orientalis) BAP-0008706 purC CDS
Automated Process Uncurated Go view Yersinia pestis Nepal516 (biovar Antiqua) BAD-0001595 purC CDS
Automated Process Uncurated Go view Yersinia pestis Pestoides F (biovar Pestoides) BAI-0002598 CDS
Automated Process Uncurated Go view Yersinia pestis UG05-0454 (biovar Antiqua) BAN-0005551 purC CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP31758 ADS-0005208 purC CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP32953 ACZ-0002876 purC CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis PB1/+ AFV-0003454 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis YPIII AFW-0001589 CDS
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 2681692 to 2692405
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
AEC-0000001sourceforward14686137Contains
AEC-0002328dapECDSforward26813942682521Downstream
AEC-0004088ypfNCDSforward26825492682749Downstream
AEC-0002329ypfHCDScomplement26828592683557Downstream
AEC-0002330ypfICDScomplement26836312685646Downstream
AEC-0002331ypfJCDScomplement26856612686524Downstream
AEC-0002332purCCDScomplement26866922687405Matches
AEC-0002333nlpBCDScomplement26876182688652Upstream
AEC-0002334dapACDScomplement26886692689547Upstream
AEC-0002335gcvRCDSforward26896932690265Upstream
AEC-0002336bcpCDSforward26902652690735Upstream
AEC-0002337hyfACDSforward26909882691605Upstream
AEC-0002338hyfBCDSforward26916052693623Upstream
Release Notes to toptop
submitted to GenBank; assigned accession number CP000948