Escherichia coli K-12 DH10B
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Working With: Genome: Escherichia coli K-12 DH10B Version: 10

AEC-0002450 (tyrA) - Escherichia coli K-12 DH10B - Feature Annotation

ASAP ID
AEC-0002450 showshow history
Names
tyrA ECDH10B_2767
Product
bifunctional chorismate mutase T and prephenate dehydrogenase
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome complement 2828735 2829856 1122 374
Sequence

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Context

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Pre-Run Search Results
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InterProScan
BLASTP
Protein Families to toptop
Author Approval Family Annotated
Automated Process Approved IPR002701 (IPR002701 Chorismate mutase II, prokaryotic-type) Jul 2009
Automated Process Approved IPR016040 (IPR016040 NAD(P)-binding domain) Jul 2009
Automated Process Approved IPR003099 (IPR003099 Prephenate dehydrogenase) Jul 2009
Automated Process Approved IPR011277 (IPR011277 Chorismate mutase, T-protein) Jul 2009
Automated Process Approved IPR008244 (IPR008244 Bifunctional chorismate mutase/prephenate dehydrogenase T-protein) Jul 2009
Protein Domains to toptop
Internal error getting result
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Automated Process Approved GO biological process GO:0006571 tyrosine biosynthetic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR011277
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO biological process GO:0008152 metabolic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR016040
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO biological process GO:0009073 aromatic amino acid family biosynthetic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR002701
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO cellular component GO:0005737 cytoplasm GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR011277
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0008977 prephenate dehydrogenase (NAD+) activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR008244
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0005488 binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR016040
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0003824 catalytic activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR016040
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0004106 chorismate mutase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR002701
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Approved name tyrA Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0008547
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Person Approved locus tag ECDH10B_2767 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu
Reference: Escherichia coli K-12 DH10B 		Feb 2008
Product
Person Approved product bifunctional chorismate mutase T and prephenate dehydrogenase Published Annotation - PubMed ID: 16397293
Reference: Escherichia coli K-12 		Mar 2007
Protein Family
Automated Process Approved protein family IPR016040 NAD(P)-binding domain Protein Sequence Similarity - InterPro Domain: IPR016040
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR002701 Chorismate mutase II, prokaryotic-type Protein Sequence Similarity - InterPro Domain: IPR002701
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR003099 Prephenate dehydrogenase Protein Sequence Similarity - InterPro Domain: IPR003099
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR011277 Chorismate mutase, T-protein Protein Sequence Similarity - InterPro Domain: IPR011277
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR008244 Bifunctional chorismate mutase/prephenate dehydrogenase T-protein Protein Sequence Similarity - InterPro Domain: IPR008244
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Other
Person Approved comment 100% identical to E. coli K-12 MG1655 feature ABE-0008547 Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0008547
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Gene Ontology
Automated Process Approved GO biological process GO:0009073 aromatic amino acid family biosynthetic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR002701
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO biological process GO:0008152 metabolic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR016040
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO biological process GO:0006571 tyrosine biosynthetic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR011277
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO cellular component GO:0005737 cytoplasm GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR011277
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0004106 chorismate mutase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR002701
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0003824 catalytic activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR016040
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0008977 prephenate dehydrogenase (NAD+) activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR008244
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0005488 binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR016040
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0000738 tyrA CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0000812 tyrA CDS
Ortholog
Automated Process Uncurated Go view Dickeya dadantii 3937 ABF-0016992 tyrA CDS
Automated Process Uncurated Go view Erwinia tasmaniensis Et1/99 [T] AFI-0002739 tyrA CDS
Automated Process Uncurated Go view Escherichia albertii TW07627 AFX-0002927 tyrA CDS
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0008637 tyrA CDS
Automated Process Uncurated Go view Escherichia coli 536 (UPEC) AEF-0002625 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0008539 tyrA CDS
Automated Process Uncurated Go view Escherichia coli APEC O1 (APEC) AEG-0002579 pheA CDS
Automated Process Uncurated Go view Escherichia coli ATCC 8739 AEM-0006609 CDS
Automated Process Uncurated Go view Escherichia coli B171 (EPEC) ADN-0010029 tyrA CDS
Automated Process Uncurated Go view Escherichia coli B7A (ETEC) ADK-0009576 CDS
Automated Process Uncurated Go view Escherichia coli CFT073 (UPEC) ABR-0079269 tyrA CDS
Automated Process Uncurated Go view Escherichia coli E110019 (EPEC) ADM-0010527 tyrA CDS
Automated Process Uncurated Go view Escherichia coli E22 (EPEC) ADL-0007820 tyrA CDS
Automated Process Uncurated Go view Escherichia coli E2348/69 (EPEC) BCI-0003048 tyrA CDS
Automated Process Uncurated Go view Escherichia coli E24377A (ETEC) ADO-0007320 tyrA CDS
Automated Process Uncurated Go view Escherichia coli EC4024 (EHEC) BBI-0004408 CDS
Automated Process Uncurated Go view Escherichia coli EC4042 (EHEC) BBA-0007180 tyrA CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0005699 tyrA CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0005174 tyrA CDS
Automated Process Uncurated Go view Escherichia coli EC4113 (EHEC) BAY-0010177 tyrA CDS
Automated Process Uncurated Go view Escherichia coli EC4115 (EHEC) BAS-0008676 tyrA CDS
Automated Process Uncurated Go view Escherichia coli EC4196 (EHEC) BAX-0006142 tyrA CDS
Automated Process Uncurated Go view Escherichia coli EC4206 (EHEC) BAW-0006468 tyrA CDS
Automated Process Uncurated Go view Escherichia coli EC4401 (EHEC) BAV-0010585 tyrA CDS
Automated Process Uncurated Go view Escherichia coli EC4486 (EHEC) BAU-0011066 tyrA CDS
Automated Process Uncurated Go view Escherichia coli EC4501 (EHEC) BAT-0007975 tyrA CDS
Automated Process Uncurated Go view Escherichia coli EC508 (EHEC) BBJ-0009427 tyrA CDS
Automated Process Uncurated Go view Escherichia coli EC869 (EHEC) BBC-0009765 tyrA CDS
Automated Process Uncurated Go view Escherichia coli EDL933 (EHEC) ABH-0027573 tyrA CDS
Automated Process Uncurated Go view Escherichia coli F11 (UPEC) ADQ-0009922 tyrA CDS
Automated Process Uncurated Go view Escherichia coli HS ADR-0007431 tyrA CDS
Person Uncurated Go view Escherichia coli K-12 MG1655 ABE-0008547 tyrA CDS
Automated Process Uncurated Go view Escherichia coli K-12 W3110 ADY-0002671 tyrA CDS
Automated Process Uncurated Go view Escherichia coli SE11 AFS-0002936 CDS
Automated Process Uncurated Go view Escherichia coli SMS-3-5 AFT-0002750 tyrA CDS
Automated Process Uncurated Go view Escherichia coli Sakai (EHEC) ACA-0133486 tyrA CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0005786 CDS
Automated Process Uncurated Go view Escherichia coli UTI89 (UPEC) AEA-0002941 tyrA CDS
Automated Process Uncurated Go view Pectobacterium atrosepticum SCRI1043 ABL-0063652 tyrA CDS
Automated Process Uncurated Go view Pectobacterium brasiliensis 1692 AED-0001959 tyrA CDS
Automated Process Uncurated Go view Pectobacterium carotovorum WPP14 ADT-0000865 tyrA CDS
Automated Process Uncurated Go view Pectobacterium parmentieri WPP163 AFJ-0004224 tyrA CDS
Automated Process Uncurated Go view Salmonella Agona SL483 BBX-0006980 tyrA CDS
Automated Process Uncurated Go view Salmonella Arizonae CDC 346-86 BCD-0000265 CDS
Automated Process Uncurated Go view Salmonella Choleraesuis SC-B67 ADB-0003130 tyrA CDS
Automated Process Uncurated Go view Salmonella Dublin CT_02021853 BCB-0007256 tyrA CDS
Automated Process Uncurated Go view Salmonella Enteritidis P125109 BCF-0008457 tyrA CDS
Automated Process Uncurated Go view Salmonella Gallinarum 287/91 BCG-0008023 tyrA CDS
Automated Process Uncurated Go view Salmonella Hadar RI_05P066 BBT-0006670 tyrA CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL476 BBV-0007245 tyrA CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL486 BBW-0008277 tyrA CDS
Automated Process Uncurated Go view Salmonella Javiana GA_MM04042433 BCA-0006909 tyrA CDS
Automated Process Uncurated Go view Salmonella Kentucky CDC 191 BBZ-0008433 tyrA CDS
Automated Process Uncurated Go view Salmonella Kentucky CVM29188 BBP-0006386 tyrA CDS
Automated Process Uncurated Go view Salmonella Newport SL254 BBQ-0007242 tyrA CDS
Automated Process Uncurated Go view Salmonella Newport SL317 BBR-0005778 tyrA CDS
Automated Process Uncurated Go view Salmonella Paratyphi A AKU_12601 BCH-0002556 CDS
Automated Process Uncurated Go view Salmonella Paratyphi A ATCC 9150 ADA-0002528 tyrA CDS
Automated Process Uncurated Go view Salmonella Paratyphi B SPB7 BCC-0003395 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA23 BBN-0007425 tyrA CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA29 BBM-0008906 tyrA CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund CVM19633 BBO-0006937 CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund SL480 BBY-0008582 CDS
Automated Process Uncurated Go view Salmonella Typhi CT18 ABX-0111108 tyrA CDS
Automated Process Uncurated Go view Salmonella Typhi Ty2 ABS-0084340 tyrA CDS
Automated Process Uncurated Go view Salmonella Typhimurium LT2 [T] ABU-0098420 tyrA CDS
Automated Process Uncurated Go view Salmonella Virchow SL491 BBS-0006649 tyrA CDS
Automated Process Uncurated Go view Salmonella Weltevreden SL484 BBU-0008593 tyrA CDS
Automated Process Uncurated Go view Salmonella enterica CVM23701 BBL-0006658 tyrA CDS
Automated Process Uncurated Go view Shigella boydii 227 ADV-0002909 tyrA CDS
Automated Process Uncurated Go view Shigella boydii BS512 ADJ-0008397 tyrA CDS
Automated Process Uncurated Go view Shigella dysenteriae 1012 BAA-0008088 tyrA CDS
Automated Process Uncurated Go view Shigella dysenteriae 197 ADU-0003166 tyrA CDS
Automated Process Uncurated Go view Shigella flexneri 2457T ABQ-0073995 tyrA CDS
Automated Process Uncurated Go view Shigella flexneri 301 ABT-0088911 tyrA CDS
Automated Process Uncurated Go view Shigella flexneri 8401 BAG-0003064 tyrA CDS
Automated Process Uncurated Go view Shigella sonnei 046 ADD-0003009 tyrA CDS
Automated Process Uncurated Go view Yersinia bercovieri ATCC 43970 [T] AEK-0003063 CDS
Automated Process Uncurated Go view Yersinia enterocolitica 8081 BAH-0002625 tyrA CDS
Automated Process Uncurated Go view Yersinia frederiksenii ATCC 33641 [T] AEI-0003994 tyrA CDS
Automated Process Uncurated Go view Yersinia intermedia ATCC 29909 [T] AEH-0003731 tyrA CDS
Automated Process Uncurated Go view Yersinia mollaretii ATCC 43969 [T] AEJ-0003294 CDS
Automated Process Uncurated Go view Yersinia pestis 91001 (biovar Microtus) ACQ-0235122 tyrA CDS
Automated Process Uncurated Go view Yersinia pestis Angola (biovar Pestoides) ADI-0007604 tyrA CDS
Automated Process Uncurated Go view Yersinia pestis Antiqua (biovar Antiqua) BAE-0003431 tyrA CDS
Automated Process Uncurated Go view Yersinia pestis B42003004 (biovar Antiqua) BAL-0007066 tyrA CDS
Automated Process Uncurated Go view Yersinia pestis CA88-4125 (biovar Orientalis) BAF-0004063 tyrA CDS
Automated Process Uncurated Go view Yersinia pestis CO92 (biovar Orientalis) ABY-0126372 tyrA CDS
Automated Process Uncurated Go view Yersinia pestis E1979001 (biovar Antiqua) BAM-0006534 tyrA CDS
Automated Process Uncurated Go view Yersinia pestis F1991016 (biovar Orientalis) BAQ-0006023 tyrA CDS
Automated Process Uncurated Go view Yersinia pestis FV-1 (biovar Orientalis) BAK-0003610 CDS
Automated Process Uncurated Go view Yersinia pestis IP275 (biovar Orientalis) BAC-0006005 tyrA CDS
Automated Process Uncurated Go view Yersinia pestis K1973002 (biovar Mediaevalis) BAO-0004360 tyrA CDS
Automated Process Uncurated Go view Yersinia pestis KIM (biovar Mediaevalis) ABI-0030548 tyrA CDS
Automated Process Uncurated Go view Yersinia pestis MG05-1020 (biovar Orientalis) BAP-0007467 tyrA CDS
Automated Process Uncurated Go view Yersinia pestis Nepal516 (biovar Antiqua) BAD-0000993 tyrA CDS
Automated Process Uncurated Go view Yersinia pestis Pestoides F (biovar Pestoides) BAI-0003500 CDS
Automated Process Uncurated Go view Yersinia pestis UG05-0454 (biovar Antiqua) BAN-0004851 tyrA CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP31758 ADS-0007228 tyrA CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP32953 ACZ-0000889 tyrA CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis PB1/+ AFV-0001040 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis YPIII AFW-0003979 CDS
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 2823735 to 2834856
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
AEC-0000001sourceforward14686137Contains
AEC-0002443clpBCDScomplement28213872823960Downstream
AEC-0004552ryfDncRNAcomplement28239402824082Downstream
AEC-0002444yfiHCDScomplement28240902824821Downstream
AEC-0002445rluDCDScomplement28248182825798Downstream
AEC-0002446yfiOCDSforward28259332826670Downstream
AEC-0002447yfiACDSforward28269412827282Downstream
AEC-0002448pheLCDSforward28273862827433Downstream
AEC-0002449pheACDSforward28275322828692Downstream
AEC-0002450tyrACDScomplement28287352829856Matches
AEC-0002451aroFCDScomplement28298672830937Upstream
AEC-0002452yfiLCDSforward28311472831512Upstream
AEC-0002453yfiRCDSforward28316622832180Upstream
AEC-0002454yfiNCDSforward28321702833396Upstream
AEC-0002455yfiBCDSforward28334122833894Upstream
AEC-0002456rplSCDScomplement28339702834317Upstream
AEC-0002457trmDCDScomplement28343592835126Upstream
Release Notes to toptop
submitted to GenBank; assigned accession number CP000948