Escherichia coli K-12 DH10B
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Working With: Genome: Escherichia coli K-12 DH10B Version: 10

AEC-0002523 (gshA) - Escherichia coli K-12 DH10B - Feature Annotation

ASAP ID
AEC-0002523 showshow history
Names
gshA ECDH10B_2856
Product
gamma-glutamate-cysteine ligase
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome complement 2905447 2907003 1557 519
Sequence

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Context

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InterProScan
BLASTP
Protein Families to toptop
Author Approval Family Annotated
Automated Process Approved IPR007370 (IPR007370 Glutamate--cysteine ligase) Jul 2009
Automated Process Approved IPR006334 (IPR006334 Glutamate--cysteine ligase, monofunctional) Jul 2009
Protein Domains to toptop
Internal error getting result
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Automated Process Approved GO biological process GO:0006750 glutathione biosynthetic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR007370
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0004357 glutamate-cysteine ligase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR007370
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Approved name gshA Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0008845
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Person Approved locus tag ECDH10B_2856 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu
Reference: Escherichia coli K-12 DH10B 		Feb 2008
Product
Person Approved product gamma-glutamate-cysteine ligase Published Annotation - PubMed ID: 16397293
Reference: Escherichia coli K-12 		Mar 2007
Protein Family
Automated Process Approved protein family IPR007370 Glutamate--cysteine ligase Protein Sequence Similarity - InterPro Domain: IPR007370
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR006334 Glutamate--cysteine ligase, monofunctional Protein Sequence Similarity - InterPro Domain: IPR006334
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Other
Person Approved comment 100% identical to E. coli K-12 MG1655 feature ABE-0008845 Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0008845
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Gene Ontology
Automated Process Approved GO biological process GO:0006750 glutathione biosynthetic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR007370
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0004357 glutamate-cysteine ligase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR007370
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0000400 gshA CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0000455 gshA CDS
Ortholog
Automated Process Uncurated Go view Dickeya dadantii 3937 ABF-0020485 gshA CDS
Automated Process Uncurated Go view Erwinia tasmaniensis Et1/99 [T] AFI-0002753 gshA CDS
Automated Process Uncurated Go view Escherichia albertii TW07627 AFX-0002857 gshA CDS
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0008742 gshA CDS
Automated Process Uncurated Go view Escherichia coli 536 (UPEC) AEF-0002677 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0008478 gshA CDS
Automated Process Uncurated Go view Escherichia coli APEC O1 (APEC) AEG-0002687 gshA CDS
Automated Process Uncurated Go view Escherichia coli ATCC 8739 AEM-0006536 CDS
Automated Process Uncurated Go view Escherichia coli B171 (EPEC) ADN-0007385 gshA CDS
Automated Process Uncurated Go view Escherichia coli B7A (ETEC) ADK-0007335 CDS
Automated Process Uncurated Go view Escherichia coli CFT073 (UPEC) ABR-0079395 gshA CDS
Automated Process Uncurated Go view Escherichia coli E110019 (EPEC) ADM-0009679 gshA CDS
Automated Process Uncurated Go view Escherichia coli E22 (EPEC) ADL-0009897 gshA CDS
Automated Process Uncurated Go view Escherichia coli E2348/69 (EPEC) BCI-0003137 gshA CDS
Automated Process Uncurated Go view Escherichia coli E24377A (ETEC) ADO-0007408 gshA CDS
Automated Process Uncurated Go view Escherichia coli EC4024 (EHEC) BBI-0001255 CDS
Automated Process Uncurated Go view Escherichia coli EC4042 (EHEC) BBA-0007273 gshA CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0005793 gshA CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0005269 gshA CDS
Automated Process Uncurated Go view Escherichia coli EC4113 (EHEC) BAY-0009031 gshA CDS
Automated Process Uncurated Go view Escherichia coli EC4115 (EHEC) BAS-0008770 gshA CDS
Automated Process Uncurated Go view Escherichia coli EC4196 (EHEC) BAX-0007427 gshA CDS
Automated Process Uncurated Go view Escherichia coli EC4206 (EHEC) BAW-0006563 gshA CDS
Automated Process Uncurated Go view Escherichia coli EC4401 (EHEC) BAV-0007387 gshA CDS
Automated Process Uncurated Go view Escherichia coli EC4486 (EHEC) BAU-0008205 gshA CDS
Automated Process Uncurated Go view Escherichia coli EC4501 (EHEC) BAT-0008066 gshA CDS
Automated Process Uncurated Go view Escherichia coli EC508 (EHEC) BBJ-0008289 gshA CDS
Automated Process Uncurated Go view Escherichia coli EC869 (EHEC) BBC-0008240 gshA CDS
Automated Process Uncurated Go view Escherichia coli EDL933 (EHEC) ABH-0027663 gshA CDS
Automated Process Uncurated Go view Escherichia coli HS ADR-0007499 gshA CDS
Person Uncurated Go view Escherichia coli K-12 MG1655 ABE-0008845 gshA CDS
Automated Process Uncurated Go view Escherichia coli K-12 W3110 ADY-0002757 gshA CDS
Automated Process Uncurated Go view Escherichia coli SE11 AFS-0002993 CDS
Automated Process Uncurated Go view Escherichia coli SMS-3-5 AFT-0002808 gshA CDS
Automated Process Uncurated Go view Escherichia coli Sakai (EHEC) ACA-0133579 gshA CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0000838 CDS
Automated Process Uncurated Go view Escherichia coli UTI89 (UPEC) AEA-0003059 gshA CDS
Automated Process Uncurated Go view Pectobacterium atrosepticum SCRI1043 ABL-0063665 gshA CDS
Automated Process Uncurated Go view Pectobacterium brasiliensis 1692 AED-0003575 CDS
Automated Process Uncurated Go view Pectobacterium carotovorum WPP14 ADT-0003086 gshA CDS
Automated Process Uncurated Go view Pectobacterium parmentieri WPP163 AFJ-0004236 gshA CDS
Automated Process Uncurated Go view Salmonella Agona SL483 BBX-0007104 gshA CDS
Automated Process Uncurated Go view Salmonella Arizonae CDC 346-86 BCD-0000159 CDS
Automated Process Uncurated Go view Salmonella Choleraesuis SC-B67 ADB-0003220 gshA CDS
Automated Process Uncurated Go view Salmonella Dublin CT_02021853 BCB-0007383 gshA CDS
Automated Process Uncurated Go view Salmonella Enteritidis P125109 BCF-0008702 gshA CDS
Automated Process Uncurated Go view Salmonella Gallinarum 287/91 BCG-0008254 gshA CDS
Automated Process Uncurated Go view Salmonella Hadar RI_05P066 BBT-0006586 gshA CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL476 BBV-0007363 gshA CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL486 BBW-0008209 gshA CDS
Automated Process Uncurated Go view Salmonella Javiana GA_MM04042433 BCA-0006775 gshA CDS
Automated Process Uncurated Go view Salmonella Kentucky CDC 191 BBZ-0008068 gshA CDS
Automated Process Uncurated Go view Salmonella Kentucky CVM29188 BBP-0006486 gshA CDS
Automated Process Uncurated Go view Salmonella Newport SL254 BBQ-0007379 gshA CDS
Automated Process Uncurated Go view Salmonella Newport SL317 BBR-0005679 gshA CDS
Automated Process Uncurated Go view Salmonella Paratyphi A AKU_12601 BCH-0002705 CDS
Automated Process Uncurated Go view Salmonella Paratyphi A ATCC 9150 ADA-0002676 gshA CDS
Automated Process Uncurated Go view Salmonella Paratyphi B SPB7 BCC-0003518 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA23 BBN-0007543 gshA CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA29 BBM-0007811 gshA CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund CVM19633 BBO-0007040 gshA CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund SL480 BBY-0007929 gshA CDS
Automated Process Uncurated Go view Salmonella Typhi CT18 ABX-0111311 gshA CDS
Automated Process Uncurated Go view Salmonella Typhi Ty2 ABS-0084432 gshA CDS
Automated Process Uncurated Go view Salmonella Typhimurium LT2 [T] ABU-0098835 gshA CDS
Automated Process Uncurated Go view Salmonella Virchow SL491 BBS-0006482 gshA CDS
Automated Process Uncurated Go view Salmonella Weltevreden SL484 BBU-0009001 gshA CDS
Automated Process Uncurated Go view Salmonella enterica CVM23701 BBL-0006748 gshA CDS
Automated Process Uncurated Go view Shigella boydii 227 ADV-0003109 gshA CDS
Automated Process Uncurated Go view Shigella boydii BS512 ADJ-0008600 gshA CDS
Automated Process Uncurated Go view Shigella dysenteriae 1012 BAA-0005573 gshA CDS
Automated Process Uncurated Go view Shigella dysenteriae 197 ADU-0003303 gshA CDS
Automated Process Uncurated Go view Shigella flexneri 2457T ABQ-0074065 gshA CDS
Automated Process Uncurated Go view Shigella flexneri 301 ABT-0088964 gshA CDS
Automated Process Uncurated Go view Shigella flexneri 8401 BAG-0003007 gshA CDS
Automated Process Uncurated Go view Shigella sonnei 046 ADD-0003101 gshA CDS
Automated Process Uncurated Go view Yersinia bercovieri ATCC 43970 [T] AEK-0003050 CDS
Automated Process Uncurated Go view Yersinia enterocolitica 8081 BAH-0002582 b2688 CDS
Automated Process Uncurated Go view Yersinia frederiksenii ATCC 33641 [T] AEI-0003981 gshA CDS
Automated Process Uncurated Go view Yersinia intermedia ATCC 29909 [T] AEH-0003718 gshA CDS
Automated Process Uncurated Go view Yersinia mollaretii ATCC 43969 [T] AEJ-0003307 CDS
Automated Process Uncurated Go view Yersinia pestis 91001 (biovar Microtus) ACQ-0235090 gshA CDS
Automated Process Uncurated Go view Yersinia pestis Angola (biovar Pestoides) ADI-0004997 gshA CDS
Automated Process Uncurated Go view Yersinia pestis Antiqua (biovar Antiqua) BAE-0003411 gshA CDS
Automated Process Uncurated Go view Yersinia pestis B42003004 (biovar Antiqua) BAL-0007081 gshA CDS
Automated Process Uncurated Go view Yersinia pestis CA88-4125 (biovar Orientalis) BAF-0004050 gshA CDS
Automated Process Uncurated Go view Yersinia pestis CO92 (biovar Orientalis) ABY-0126426 gshA CDS
Automated Process Uncurated Go view Yersinia pestis E1979001 (biovar Antiqua) BAM-0006517 gshA CDS
Automated Process Uncurated Go view Yersinia pestis F1991016 (biovar Orientalis) BAQ-0006007 gshA CDS
Automated Process Uncurated Go view Yersinia pestis FV-1 (biovar Orientalis) BAK-0001469 CDS
Automated Process Uncurated Go view Yersinia pestis IP275 (biovar Orientalis) BAC-0005987 gshA CDS
Automated Process Uncurated Go view Yersinia pestis K1973002 (biovar Mediaevalis) BAO-0004343 gshA CDS
Automated Process Uncurated Go view Yersinia pestis KIM (biovar Mediaevalis) ABI-0030529 gshA CDS
Automated Process Uncurated Go view Yersinia pestis MG05-1020 (biovar Orientalis) BAP-0007449 gshA CDS
Automated Process Uncurated Go view Yersinia pestis Nepal516 (biovar Antiqua) BAD-0000969 gshA CDS
Automated Process Uncurated Go view Yersinia pestis Pestoides F (biovar Pestoides) BAI-0003665 CDS
Automated Process Uncurated Go view Yersinia pestis UG05-0454 (biovar Antiqua) BAN-0004836 gshA CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP31758 ADS-0007244 gshA CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP32953 ACZ-0000876 gshA CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis PB1/+ AFV-0001025 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis YPIII AFW-0003994 CDS
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 2900447 to 2912003
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
AEC-0000001sourceforward14686137Contains
AEC-0002518ygaZCDSforward29001812900918Downstream
AEC-0002519ygaHCDSforward29009082901243Downstream
AEC-0002520emrACDSforward29019912903163Downstream
AEC-0002521emrBCDSforward29031802904718Downstream
AEC-0002522luxSCDScomplement29047822905297Downstream
AEC-0004269sraDncRNAforward29053662905443Downstream
AEC-0002523gshACDScomplement29054472907003Matches
AEC-0002524yqaACDScomplement29070762907504Upstream
AEC-0002525yqaBCDScomplement29075012908067Upstream
AEC-0004155argQtRNAcomplement29083482908424Upstream
AEC-0004156argZtRNAcomplement29086232908699Upstream
AEC-0004157argYtRNAcomplement29087622908838Upstream
AEC-0004158argVtRNAcomplement29090372909113Upstream
AEC-0004159serVtRNAcomplement29091172909209Upstream
AEC-0002526csrACDScomplement29095252909710Upstream
AEC-0002527alaSCDScomplement29099452912575Upstream
Release Notes to toptop
submitted to GenBank; assigned accession number CP000948