Escherichia coli K-12 DH10B
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Working With: Genome: Escherichia coli K-12 DH10B Version: 10

AEC-0002525 (yqaB) - Escherichia coli K-12 DH10B - Feature Annotation

ASAP ID
AEC-0002525 showshow history
Names
yqaB ECDH10B_2858
Product
fructose-1-P and 6-phosphogluconate phosphatase
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome complement 2907501 2908067 567 189
Sequence

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Context

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Pre-Run Search Results
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InterProScan
BLASTP
Protein Families to toptop
Author Approval Family Annotated
Automated Process Approved IPR005834 (IPR005834 (DEPRECATED) Haloacid dehalogenase-like hydrolase) Jul 2009
Automated Process Approved IPR010976 (IPR010976 Beta-phosphoglucomutase hydrolase) Jul 2009
Automated Process Approved IPR006402 (IPR006402 (DEPRECATED) HAD-superfamily hydrolase, subfamily IA, variant 3) Jul 2009
Automated Process Approved IPR005833 (IPR005833 (DEPRECATED) Haloacid dehalogenase/epoxide hydrolase) Jul 2009
Protein Domains to toptop
Internal error getting result
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Automated Process Approved GO biological process GO:0008152 metabolic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR005834
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0016787 hydrolase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR005833
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0003824 catalytic activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR005834
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Approved name yqaB Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0008850
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Person Approved locus tag ECDH10B_2858 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu
Reference: Escherichia coli K-12 DH10B 		Feb 2008
Product
Person Approved product fructose-1-P and 6-phosphogluconate phosphatase Experimental - PubMed ID: 15808744
Reference: Escherichia coli DH5-alpha 		Mar 2007
Protein Family
Automated Process Approved protein family IPR010976 Beta-phosphoglucomutase hydrolase Protein Sequence Similarity - InterPro Domain: IPR010976
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR005834 (DEPRECATED) Haloacid dehalogenase-like hydrolase Protein Sequence Similarity - InterPro Domain: IPR005834
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR006402 (DEPRECATED) HAD-superfamily hydrolase, subfamily IA, variant 3 Protein Sequence Similarity - InterPro Domain: IPR006402
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR005833 (DEPRECATED) Haloacid dehalogenase/epoxide hydrolase Protein Sequence Similarity - InterPro Domain: IPR005833
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Other
Person Approved comment 100% identical to E. coli K-12 MG1655 feature ABE-0008850 Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0008850
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Gene Ontology
Automated Process Approved GO biological process GO:0008152 metabolic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR005834
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0003824 catalytic activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR005834
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0016787 hydrolase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR005833
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0001488 yqaB CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0001776 yqaB CDS
Ortholog
Automated Process Uncurated Go view Dickeya dadantii 3937 ABF-0019318 yqaB CDS
Automated Process Uncurated Go view Erwinia tasmaniensis Et1/99 [T] AFI-0002755 yqaB CDS
Automated Process Uncurated Go view Escherichia albertii TW07627 AFX-0002855 CDS
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0008740 CDS
Automated Process Uncurated Go view Escherichia coli 536 (UPEC) AEF-0002679 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0008476 CDS
Automated Process Uncurated Go view Escherichia coli APEC O1 (APEC) AEG-0002689 yqaB CDS
Automated Process Uncurated Go view Escherichia coli ATCC 8739 AEM-0006533 CDS
Automated Process Uncurated Go view Escherichia coli B171 (EPEC) ADN-0007387 CDS
Automated Process Uncurated Go view Escherichia coli B7A (ETEC) ADK-0007337 CDS
Automated Process Uncurated Go view Escherichia coli CFT073 (UPEC) ABR-0079397 yqaB CDS
Automated Process Uncurated Go view Escherichia coli E110019 (EPEC) ADM-0009677 CDS
Automated Process Uncurated Go view Escherichia coli E22 (EPEC) ADL-0009895 CDS
Automated Process Uncurated Go view Escherichia coli E2348/69 (EPEC) BCI-0003139 yqaB CDS
Automated Process Uncurated Go view Escherichia coli E24377A (ETEC) ADO-0007410 CDS
Automated Process Uncurated Go view Escherichia coli EC4024 (EHEC) BBI-0001257 CDS
Automated Process Uncurated Go view Escherichia coli EC4042 (EHEC) BBA-0007275 CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0005795 CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0005271 CDS
Automated Process Uncurated Go view Escherichia coli EC4113 (EHEC) BAY-0009033 CDS
Automated Process Uncurated Go view Escherichia coli EC4115 (EHEC) BAS-0008772 CDS
Automated Process Uncurated Go view Escherichia coli EC4196 (EHEC) BAX-0007425 CDS
Automated Process Uncurated Go view Escherichia coli EC4206 (EHEC) BAW-0006565 CDS
Automated Process Uncurated Go view Escherichia coli EC4486 (EHEC) BAU-0008207 CDS
Automated Process Uncurated Go view Escherichia coli EC4501 (EHEC) BAT-0008068 CDS
Automated Process Uncurated Go view Escherichia coli EC508 (EHEC) BBJ-0008291 CDS
Automated Process Uncurated Go view Escherichia coli EC869 (EHEC) BBC-0008242 CDS
Automated Process Uncurated Go view Escherichia coli EDL933 (EHEC) ABH-0027665 yqaB CDS
Automated Process Uncurated Go view Escherichia coli F11 (UPEC) ADQ-0006333 yqaB CDS
Automated Process Uncurated Go view Escherichia coli HS ADR-0007501 CDS
Person Uncurated Go view Escherichia coli K-12 MG1655 ABE-0008850 yqaB CDS
Automated Process Uncurated Go view Escherichia coli K-12 W3110 ADY-0002759 yqaB CDS
Automated Process Uncurated Go view Escherichia coli SE11 AFS-0002995 CDS
Automated Process Uncurated Go view Escherichia coli SMS-3-5 AFT-0002810 CDS
Automated Process Uncurated Go view Escherichia coli Sakai (EHEC) ACA-0133581 yqaB CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0000840 CDS
Automated Process Uncurated Go view Escherichia coli UTI89 (UPEC) AEA-0003061 yqaB CDS
Automated Process Uncurated Go view Pectobacterium atrosepticum SCRI1043 ABL-0063667 yqaB CDS
Automated Process Uncurated Go view Pectobacterium brasiliensis 1692 AED-0001947 CDS
Automated Process Uncurated Go view Pectobacterium carotovorum WPP14 ADT-0000873 CDS
Automated Process Uncurated Go view Pectobacterium parmentieri WPP163 AFJ-0004238 yqaB CDS
Automated Process Uncurated Go view Salmonella Agona SL483 BBX-0007106 CDS
Automated Process Uncurated Go view Salmonella Arizonae CDC 346-86 BCD-0000157 CDS
Automated Process Uncurated Go view Salmonella Choleraesuis SC-B67 ADB-0003222 yqaB CDS
Automated Process Uncurated Go view Salmonella Dublin CT_02021853 BCB-0007385 CDS
Automated Process Uncurated Go view Salmonella Enteritidis P125109 BCF-0008707 yqaB CDS
Automated Process Uncurated Go view Salmonella Gallinarum 287/91 BCG-0008259 yqaB CDS
Automated Process Uncurated Go view Salmonella Hadar RI_05P066 BBT-0006584 CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL476 BBV-0007365 CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL486 BBW-0008211 CDS
Automated Process Uncurated Go view Salmonella Javiana GA_MM04042433 BCA-0006773 CDS
Automated Process Uncurated Go view Salmonella Kentucky CDC 191 BBZ-0008070 CDS
Automated Process Uncurated Go view Salmonella Kentucky CVM29188 BBP-0006488 CDS
Automated Process Uncurated Go view Salmonella Newport SL254 BBQ-0007381 CDS
Automated Process Uncurated Go view Salmonella Newport SL317 BBR-0005677 CDS
Automated Process Uncurated Go view Salmonella Paratyphi A AKU_12601 BCH-0002707 CDS
Automated Process Uncurated Go view Salmonella Paratyphi A ATCC 9150 ADA-0002678 yqaB CDS
Automated Process Uncurated Go view Salmonella Paratyphi B SPB7 BCC-0003520 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA23 BBN-0007545 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA29 BBM-0007809 CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund CVM19633 BBO-0007042 CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund SL480 BBY-0007931 CDS
Automated Process Uncurated Go view Salmonella Typhi CT18 ABX-0111314 yqaB CDS
Automated Process Uncurated Go view Salmonella Typhi Ty2 ABS-0084434 yqaB CDS
Automated Process Uncurated Go view Salmonella Typhimurium LT2 [T] ABU-0098840 yqaB CDS
Automated Process Uncurated Go view Salmonella Virchow SL491 BBS-0006480 CDS
Automated Process Uncurated Go view Salmonella Weltevreden SL484 BBU-0008999 CDS
Automated Process Uncurated Go view Salmonella enterica CVM23701 BBL-0006750 CDS
Automated Process Uncurated Go view Shigella boydii 227 ADV-0003107 yqaB CDS
Automated Process Uncurated Go view Shigella boydii BS512 ADJ-0008598 CDS
Automated Process Uncurated Go view Shigella dysenteriae 1012 BAA-0005571 CDS
Automated Process Uncurated Go view Shigella dysenteriae 197 ADU-0003305 yqaB CDS
Automated Process Uncurated Go view Shigella flexneri 2457T ABQ-0074067 yqaB CDS
Automated Process Uncurated Go view Shigella flexneri 301 ABT-0088966 yqaB CDS
Automated Process Uncurated Go view Shigella flexneri 8401 BAG-0003005 yqaB CDS
Automated Process Uncurated Go view Shigella sonnei 046 ADD-0003103 yqaB CDS
Automated Process Uncurated Go view Yersinia bercovieri ATCC 43970 [T] AEK-0003048 CDS
Automated Process Uncurated Go view Yersinia enterocolitica 8081 BAH-0002577 yqaB CDS
Automated Process Uncurated Go view Yersinia frederiksenii ATCC 33641 [T] AEI-0003979 yqaB CDS
Automated Process Uncurated Go view Yersinia intermedia ATCC 29909 [T] AEH-0003716 yqaB CDS
Automated Process Uncurated Go view Yersinia mollaretii ATCC 43969 [T] AEJ-0003309 CDS
Automated Process Uncurated Go view Yersinia pestis 91001 (biovar Microtus) ACQ-0235084 yqaB CDS
Automated Process Uncurated Go view Yersinia pestis Angola (biovar Pestoides) ADI-0004999 CDS
Automated Process Uncurated Go view Yersinia pestis Antiqua (biovar Antiqua) BAE-0003408 yqaB CDS
Automated Process Uncurated Go view Yersinia pestis B42003004 (biovar Antiqua) BAL-0007083 CDS
Automated Process Uncurated Go view Yersinia pestis CA88-4125 (biovar Orientalis) BAF-0004048 CDS
Automated Process Uncurated Go view Yersinia pestis CO92 (biovar Orientalis) ABY-0126433 yqaB CDS
Automated Process Uncurated Go view Yersinia pestis E1979001 (biovar Antiqua) BAM-0006515 CDS
Automated Process Uncurated Go view Yersinia pestis F1991016 (biovar Orientalis) BAQ-0006005 CDS
Automated Process Uncurated Go view Yersinia pestis FV-1 (biovar Orientalis) BAK-0001468 CDS
Automated Process Uncurated Go view Yersinia pestis IP275 (biovar Orientalis) BAC-0005985 CDS
Automated Process Uncurated Go view Yersinia pestis K1973002 (biovar Mediaevalis) BAO-0004341 CDS
Automated Process Uncurated Go view Yersinia pestis KIM (biovar Mediaevalis) ABI-0030527 yqaB CDS
Automated Process Uncurated Go view Yersinia pestis MG05-1020 (biovar Orientalis) BAP-0007447 CDS
Automated Process Uncurated Go view Yersinia pestis Nepal516 (biovar Antiqua) BAD-0000966 yqaB CDS
Automated Process Uncurated Go view Yersinia pestis Pestoides F (biovar Pestoides) BAI-0003662 CDS
Automated Process Uncurated Go view Yersinia pestis UG05-0454 (biovar Antiqua) BAN-0004834 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP31758 ADS-0007246 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP32953 ACZ-0000874 yqaB CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis PB1/+ AFV-0001022 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis YPIII AFW-0003997 CDS
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 2902501 to 2913067
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
AEC-0000001sourceforward14686137Contains
AEC-0002520emrACDSforward29019912903163Downstream
AEC-0002521emrBCDSforward29031802904718Downstream
AEC-0002522luxSCDScomplement29047822905297Downstream
AEC-0004269sraDncRNAforward29053662905443Downstream
AEC-0002523gshACDScomplement29054472907003Downstream
AEC-0002524yqaACDScomplement29070762907504Overlaps Downstream
AEC-0002525yqaBCDScomplement29075012908067Matches
AEC-0004155argQtRNAcomplement29083482908424Upstream
AEC-0004156argZtRNAcomplement29086232908699Upstream
AEC-0004157argYtRNAcomplement29087622908838Upstream
AEC-0004158argVtRNAcomplement29090372909113Upstream
AEC-0004159serVtRNAcomplement29091172909209Upstream
AEC-0002526csrACDScomplement29095252909710Upstream
AEC-0002527alaSCDScomplement29099452912575Upstream
AEC-0002528recXCDScomplement29127032913203Upstream
Release Notes to toptop
submitted to GenBank; assigned accession number CP000948