Escherichia coli K-12 DH10B
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Working With: Genome: Escherichia coli K-12 DH10B Version: 10

AEC-0002537 (gutQ) - Escherichia coli K-12 DH10B - Feature Annotation

ASAP ID
AEC-0002537 showshow history
Names
gutQ ECDH10B_2876
Product
predicted phosphosugar-binding protein
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome forward 2920377 2921342 966 322
Sequence

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Context

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Pre-Run Search Results
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InterProScan
BLASTP
Protein Families to toptop
Author Approval Family Annotated
Automated Process Approved IPR001412 (IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site) Jul 2009
Automated Process Approved IPR001347 (IPR001347 Sugar isomerase (SIS)) Jul 2009
Automated Process Approved IPR000644 (IPR000644 CBS domain) Jul 2009
Automated Process Approved IPR004800 (IPR004800 Phosphosugar isomerase, KdsD/KpsF-type) Jul 2009
Protein Domains to toptop
Internal error getting result
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Automated Process Approved GO biological process GO:0006412 translation GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001412
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO biological process GO:0005975 carbohydrate metabolic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001347
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO biological process GO:0006418 tRNA aminoacylation for protein translation GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001412
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO cellular component GO:0005737 cytoplasm GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001412
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0016853 isomerase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR004800
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0005529 (DEPRECATED) sugar binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001347
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0000166 nucleotide binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001412
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0004812 aminoacyl-tRNA ligase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001412
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0005524 ATP binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001412
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Approved name gutQ Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0008902
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Person Approved locus tag ECDH10B_2876 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu
Reference: Escherichia coli K-12 DH10B 		Feb 2008
Product
Person Approved product predicted phosphosugar-binding protein Published Annotation - PubMed ID: 16397293
Reference: Escherichia coli K-12 		Mar 2007
Protein Family
Automated Process Approved protein family IPR001347 Sugar isomerase (SIS) Protein Sequence Similarity - InterPro Domain: IPR001347
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site Protein Sequence Similarity - InterPro Domain: IPR001412
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR000644 CBS domain Protein Sequence Similarity - InterPro Domain: IPR000644
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR004800 Phosphosugar isomerase, KdsD/KpsF-type Protein Sequence Similarity - InterPro Domain: IPR004800
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Other
Person Approved comment 100% identical to E. coli K-12 MG1655 feature ABE-0008902 Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0008902
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Gene Ontology
Automated Process Approved GO biological process GO:0006418 tRNA aminoacylation for protein translation GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001412
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO biological process GO:0006412 translation GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001412
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO biological process GO:0005975 carbohydrate metabolic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001347
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO cellular component GO:0005737 cytoplasm GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001412
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0016853 isomerase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR004800
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0000166 nucleotide binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001412
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0004812 aminoacyl-tRNA ligase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001412
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0005524 ATP binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001412
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0005529 (DEPRECATED) sugar binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001347
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0002568 gutQ CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0002713 gutQ CDS
Ortholog
Automated Process Uncurated Go view Escherichia albertii TW07627 AFX-0002843 gutQ CDS
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0008280 gutQ CDS
Automated Process Uncurated Go view Escherichia coli 536 (UPEC) AEF-0002697 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0008456 gutQ CDS
Automated Process Uncurated Go view Escherichia coli APEC O1 (APEC) AEG-0002704 gutQ CDS
Automated Process Uncurated Go view Escherichia coli ATCC 8739 AEM-0006513 CDS
Automated Process Uncurated Go view Escherichia coli B171 (EPEC) ADN-0007407 gutQ CDS
Automated Process Uncurated Go view Escherichia coli B7A (ETEC) ADK-0007357 CDS
Automated Process Uncurated Go view Escherichia coli CFT073 (UPEC) ABR-0079418 gutQ CDS
Automated Process Uncurated Go view Escherichia coli E110019 (EPEC) ADM-0008176 gutQ CDS
Automated Process Uncurated Go view Escherichia coli E22 (EPEC) ADL-0008809 gutQ CDS
Automated Process Uncurated Go view Escherichia coli E2348/69 (EPEC) BCI-0003151 gutQ CDS
Automated Process Uncurated Go view Escherichia coli E24377A (ETEC) ADO-0007429 gutQ CDS
Automated Process Uncurated Go view Escherichia coli EC4024 (EHEC) BBI-0001274 CDS
Automated Process Uncurated Go view Escherichia coli EC4042 (EHEC) BBA-0007297 gutQ CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0005817 gutQ CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0005293 gutQ CDS
Automated Process Uncurated Go view Escherichia coli EC4113 (EHEC) BAY-0008081 gutQ CDS
Automated Process Uncurated Go view Escherichia coli EC4115 (EHEC) BAS-0008794 gutQ CDS
Automated Process Uncurated Go view Escherichia coli EC4196 (EHEC) BAX-0007405 gutQ CDS
Automated Process Uncurated Go view Escherichia coli EC4206 (EHEC) BAW-0006588 gutQ CDS
Automated Process Uncurated Go view Escherichia coli EC4401 (EHEC) BAV-0007412 gutQ CDS
Automated Process Uncurated Go view Escherichia coli EC4486 (EHEC) BAU-0008230 gutQ CDS
Automated Process Uncurated Go view Escherichia coli EC4501 (EHEC) BAT-0008479 gutQ CDS
Automated Process Uncurated Go view Escherichia coli EC508 (EHEC) BBJ-0007929 gutQ CDS
Automated Process Uncurated Go view Escherichia coli EC869 (EHEC) BBC-0008265 gutQ CDS
Automated Process Uncurated Go view Escherichia coli EDL933 (EHEC) ABH-0027686 gutQ CDS
Automated Process Uncurated Go view Escherichia coli F11 (UPEC) ADQ-0006351 gutQ CDS
Automated Process Uncurated Go view Escherichia coli HS ADR-0007519 gutQ CDS
Person Uncurated Go view Escherichia coli K-12 MG1655 ABE-0008902 gutQ CDS
Automated Process Uncurated Go view Escherichia coli K-12 W3110 ADY-0002777 gutQ CDS
Automated Process Uncurated Go view Escherichia coli SE11 AFS-0003013 CDS
Automated Process Uncurated Go view Escherichia coli SMS-3-5 AFT-0002829 gutQ CDS
Automated Process Uncurated Go view Escherichia coli Sakai (EHEC) ACA-0133600 gutQ CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0000855 CDS
Automated Process Uncurated Go view Escherichia coli UTI89 (UPEC) AEA-0003079 gutQ CDS
Automated Process Uncurated Go view Salmonella Agona SL483 BBX-0007125 gutQ CDS
Automated Process Uncurated Go view Salmonella Arizonae CDC 346-86 BCD-0000136 CDS
Automated Process Uncurated Go view Salmonella Choleraesuis SC-B67 ADB-0003245 gutQ CDS
Automated Process Uncurated Go view Salmonella Dublin CT_02021853 BCB-0007403 gutQ CDS
Automated Process Uncurated Go view Salmonella Enteritidis P125109 BCF-0008754 gutQ CDS
Automated Process Uncurated Go view Salmonella Gallinarum 287/91 BCG-0008305 gutQ CDS
Automated Process Uncurated Go view Salmonella Hadar RI_05P066 BBT-0006565 gutQ CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL476 BBV-0007384 gutQ CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL486 BBW-0006342 gutQ CDS
Automated Process Uncurated Go view Salmonella Javiana GA_MM04042433 BCA-0005382 gutQ CDS
Automated Process Uncurated Go view Salmonella Kentucky CDC 191 BBZ-0005399 gutQ CDS
Automated Process Uncurated Go view Salmonella Kentucky CVM29188 BBP-0006507 gutQ CDS
Automated Process Uncurated Go view Salmonella Newport SL254 BBQ-0007399 gutQ CDS
Automated Process Uncurated Go view Salmonella Newport SL317 BBR-0005660 gutQ CDS
Automated Process Uncurated Go view Salmonella Paratyphi A AKU_12601 BCH-0002724 CDS
Automated Process Uncurated Go view Salmonella Paratyphi A ATCC 9150 ADA-0002695 gutQ CDS
Automated Process Uncurated Go view Salmonella Paratyphi B SPB7 BCC-0003544 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA23 BBN-0007563 gutQ CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA29 BBM-0005661 gutQ CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund CVM19633 BBO-0007061 gutQ CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund SL480 BBY-0005270 gutQ CDS
Automated Process Uncurated Go view Salmonella Typhi CT18 ABX-0111357 gutQ CDS
Automated Process Uncurated Go view Salmonella Typhi Ty2 ABS-0084457 gutQ CDS
Automated Process Uncurated Go view Salmonella Typhimurium LT2 [T] ABU-0098891 gutQ CDS
Automated Process Uncurated Go view Salmonella Virchow SL491 BBS-0006461 gutQ CDS
Automated Process Uncurated Go view Salmonella Weltevreden SL484 BBU-0006806 gutQ CDS
Automated Process Uncurated Go view Salmonella enterica CVM23701 BBL-0008215 gutQ CDS
Automated Process Uncurated Go view Shigella boydii 227 ADV-0003090 gutQ CDS
Automated Process Uncurated Go view Shigella dysenteriae 1012 BAA-0005553 gutQ CDS
Automated Process Uncurated Go view Shigella dysenteriae 197 ADU-0003324 gutQ CDS
Automated Process Uncurated Go view Shigella flexneri 2457T ABQ-0074086 gutQ CDS
Automated Process Uncurated Go view Shigella flexneri 301 ABT-0088984 gutQ CDS
Automated Process Uncurated Go view Shigella flexneri 8401 BAG-0002988 gutQ CDS
Automated Process Uncurated Go view Shigella sonnei 046 ADD-0003121 gutQ CDS
Automated Process Uncurated Go view Yersinia bercovieri ATCC 43970 [T] AEK-0000765 CDS
Automated Process Uncurated Go view Yersinia enterocolitica 8081 BAH-0003260 gutQ CDS
Automated Process Uncurated Go view Yersinia frederiksenii ATCC 33641 [T] AEI-0001521 gutQ CDS
Automated Process Uncurated Go view Yersinia intermedia ATCC 29909 [T] AEH-0002546 gutQ CDS
Automated Process Uncurated Go view Yersinia mollaretii ATCC 43969 [T] AEJ-0002774 CDS
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 2915377 to 2926342
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
AEC-0000001sourceforward14686137Contains
AEC-0002530mltBCDScomplement29150552916140Upstream
AEC-0002531srlACDSforward29163962916959Upstream
AEC-0002532srlECDSforward29169562917915Upstream
AEC-0002533srlBCDSforward29179262918297Upstream
AEC-0002534srlDCDSforward29183012919080Upstream
AEC-0002535gutMCDSforward29191852919544Upstream
AEC-0002536srlRCDSforward29196112920384Overlaps Upstream
AEC-0002537gutQCDSforward29203772921342Matches
AEC-0002538norRCDScomplement29213392922853Overlaps Downstream
AEC-0002539norVCDSforward29230402924479Downstream
AEC-0002540norWCDSforward29244762925609Downstream
AEC-0002541hypFCDScomplement29257372927989Downstream
Release Notes to toptop
submitted to GenBank; assigned accession number CP000948