Escherichia coli K-12 DH10B
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Working With: Genome: Escherichia coli K-12 DH10B Version: 10

AEC-0002572 (surE) - Escherichia coli K-12 DH10B - Feature Annotation

ASAP ID
AEC-0002572 showshow history
Names
surE ECDH10B_2912
Product
broad specificity 5'(3')-nucleotidase and polyphosphatase
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome complement 2960077 2960838 762 254
Sequence

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Context

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InterProScan
BLASTP
Protein Families to toptop
Author Approval Family Annotated
Automated Process Approved IPR002828 (IPR002828 Survival protein SurE-like phosphatase/nucleotidase) Jul 2009
Protein Domains to toptop
Internal error getting result
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Automated Process Approved GO molecular function GO:0016787 hydrolase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR002828
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Approved name surE Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0009008
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Person Approved locus tag ECDH10B_2912 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu
Reference: Escherichia coli K-12 DH10B 		Feb 2008
Product
Person Approved product broad specificity 5'(3')-nucleotidase and polyphosphatase Published Annotation - PubMed ID: 16397293
Reference: Escherichia coli K-12 		Mar 2007
Protein Family
Automated Process Approved protein family IPR002828 Survival protein SurE-like phosphatase/nucleotidase Protein Sequence Similarity - InterPro Domain: IPR002828
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Other
Person Approved comment 100% identical to E. coli K-12 MG1655 feature ABE-0009008 Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0009008
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Gene Ontology
Automated Process Approved GO molecular function GO:0016787 hydrolase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR002828
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0001650 surE CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0001706 surE CDS
Ortholog
Automated Process Uncurated Go view Erwinia tasmaniensis Et1/99 [T] AFI-0002793 surE CDS
Automated Process Uncurated Go view Escherichia albertii TW07627 AFX-0002800 surE CDS
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0008242 surE CDS
Automated Process Uncurated Go view Escherichia coli 536 (UPEC) AEF-0002755 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0008418 surE CDS
Automated Process Uncurated Go view Escherichia coli APEC O1 (APEC) AEG-0002746 surE CDS
Automated Process Uncurated Go view Escherichia coli ATCC 8739 AEM-0006473 CDS
Automated Process Uncurated Go view Escherichia coli B171 (EPEC) ADN-0007454 surE CDS
Automated Process Uncurated Go view Escherichia coli B7A (ETEC) ADK-0006985 SurE CDS
Automated Process Uncurated Go view Escherichia coli CFT073 (UPEC) ABR-0079467 umpG CDS
Automated Process Uncurated Go view Escherichia coli E110019 (EPEC) ADM-0008131 surE CDS
Automated Process Uncurated Go view Escherichia coli E22 (EPEC) ADL-0008854 surE CDS
Automated Process Uncurated Go view Escherichia coli E2348/69 (EPEC) BCI-0003207 surE CDS
Automated Process Uncurated Go view Escherichia coli E24377A (ETEC) ADO-0007481 surE CDS
Automated Process Uncurated Go view Escherichia coli EC4024 (EHEC) BBI-0000158 CDS
Automated Process Uncurated Go view Escherichia coli EC4042 (EHEC) BBA-0007334 surE CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0005855 surE CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0005330 surE CDS
Automated Process Uncurated Go view Escherichia coli EC4113 (EHEC) BAY-0008043 surE CDS
Automated Process Uncurated Go view Escherichia coli EC4115 (EHEC) BAS-0008831 surE CDS
Automated Process Uncurated Go view Escherichia coli EC4196 (EHEC) BAX-0007366 surE CDS
Automated Process Uncurated Go view Escherichia coli EC4206 (EHEC) BAW-0006626 surE CDS
Automated Process Uncurated Go view Escherichia coli EC4401 (EHEC) BAV-0007449 surE CDS
Automated Process Uncurated Go view Escherichia coli EC4486 (EHEC) BAU-0008267 surE CDS
Automated Process Uncurated Go view Escherichia coli EC4501 (EHEC) BAT-0008440 surE CDS
Automated Process Uncurated Go view Escherichia coli EC508 (EHEC) BBJ-0007890 surE CDS
Automated Process Uncurated Go view Escherichia coli EC869 (EHEC) BBC-0008302 surE CDS
Automated Process Uncurated Go view Escherichia coli EDL933 (EHEC) ABH-0027723 surE CDS
Automated Process Uncurated Go view Escherichia coli F11 (UPEC) ADQ-0006182 surE CDS
Automated Process Uncurated Go view Escherichia coli HS ADR-0007557 surE CDS
Person Uncurated Go view Escherichia coli K-12 MG1655 ABE-0009008 umpG CDS
Automated Process Uncurated Go view Escherichia coli K-12 W3110 ADY-0002813 surE CDS
Automated Process Uncurated Go view Escherichia coli SE11 AFS-0003053 CDS
Automated Process Uncurated Go view Escherichia coli SMS-3-5 AFT-0002867 surE CDS
Automated Process Uncurated Go view Escherichia coli Sakai (EHEC) ACA-0133634 surE CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0000890 CDS
Automated Process Uncurated Go view Escherichia coli UTI89 (UPEC) AEA-0003124 surE CDS
Automated Process Uncurated Go view Salmonella Agona SL483 BBX-0007219 surE CDS
Automated Process Uncurated Go view Salmonella Arizonae CDC 346-86 BCD-0000031 CDS
Automated Process Uncurated Go view Salmonella Choleraesuis SC-B67 ADB-0003345 surE CDS
Automated Process Uncurated Go view Salmonella Dublin CT_02021853 BCB-0007493 surE CDS
Automated Process Uncurated Go view Salmonella Enteritidis P125109 BCF-0009028 surE CDS
Automated Process Uncurated Go view Salmonella Gallinarum 287/91 BCG-0008568 surE CDS
Automated Process Uncurated Go view Salmonella Hadar RI_05P066 BBT-0006472 surE CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL476 BBV-0007476 surE CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL486 BBW-0006436 surE CDS
Automated Process Uncurated Go view Salmonella Javiana GA_MM04042433 BCA-0005471 surE CDS
Automated Process Uncurated Go view Salmonella Kentucky CDC 191 BBZ-0005493 surE CDS
Automated Process Uncurated Go view Salmonella Kentucky CVM29188 BBP-0006601 surE CDS
Automated Process Uncurated Go view Salmonella Newport SL254 BBQ-0007492 surE CDS
Automated Process Uncurated Go view Salmonella Newport SL317 BBR-0005567 surE CDS
Automated Process Uncurated Go view Salmonella Paratyphi A AKU_12601 BCH-0002811 CDS
Automated Process Uncurated Go view Salmonella Paratyphi A ATCC 9150 ADA-0002782 surE CDS
Automated Process Uncurated Go view Salmonella Paratyphi B SPB7 BCC-0003656 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA23 BBN-0007654 surE CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA29 BBM-0005567 surE CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund CVM19633 BBO-0007150 surE CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund SL480 BBY-0005359 surE CDS
Automated Process Uncurated Go view Salmonella Typhi CT18 ABX-0111575 surE CDS
Automated Process Uncurated Go view Salmonella Typhi Ty2 ABS-0084545 surE CDS
Automated Process Uncurated Go view Salmonella Typhimurium LT2 [T] ABU-0099142 surE CDS
Automated Process Uncurated Go view Salmonella Virchow SL491 BBS-0006366 surE CDS
Automated Process Uncurated Go view Salmonella Weltevreden SL484 BBU-0006712 surE CDS
Automated Process Uncurated Go view Salmonella enterica CVM23701 BBL-0007332 surE CDS
Automated Process Uncurated Go view Shigella boydii 227 ADV-0003056 surE CDS
Automated Process Uncurated Go view Shigella boydii BS512 ADJ-0008542 surE CDS
Automated Process Uncurated Go view Shigella dysenteriae 1012 BAA-0003834 surE CDS
Automated Process Uncurated Go view Shigella dysenteriae 197 ADU-0003364 surE CDS
Automated Process Uncurated Go view Shigella flexneri 2457T ABQ-0074129 surE CDS
Automated Process Uncurated Go view Shigella flexneri 301 ABT-0089018 surE CDS
Automated Process Uncurated Go view Shigella flexneri 8401 BAG-0002942 surE CDS
Automated Process Uncurated Go view Shigella sonnei 046 ADD-0003162 surE CDS
Automated Process Uncurated Go view Yersinia bercovieri ATCC 43970 [T] AEK-0003182 CDS
Automated Process Uncurated Go view Yersinia enterocolitica 8081 BAH-0002385 surE CDS
Automated Process Uncurated Go view Yersinia frederiksenii ATCC 33641 [T] AEI-0000102 surE CDS
Automated Process Uncurated Go view Yersinia intermedia ATCC 29909 [T] AEH-0000496 surE CDS
Automated Process Uncurated Go view Yersinia mollaretii ATCC 43969 [T] AEJ-0000921 CDS
Automated Process Uncurated Go view Yersinia pestis 91001 (biovar Microtus) ACQ-0234946 surE CDS
Automated Process Uncurated Go view Yersinia pestis Angola (biovar Pestoides) ADI-0005067 surE CDS
Automated Process Uncurated Go view Yersinia pestis Antiqua (biovar Antiqua) BAE-0003342 surE CDS
Automated Process Uncurated Go view Yersinia pestis B42003004 (biovar Antiqua) BAL-0007149 surE CDS
Automated Process Uncurated Go view Yersinia pestis CA88-4125 (biovar Orientalis) BAF-0003997 surE CDS
Automated Process Uncurated Go view Yersinia pestis CO92 (biovar Orientalis) ABY-0126638 surE CDS
Automated Process Uncurated Go view Yersinia pestis E1979001 (biovar Antiqua) BAM-0006448 surE CDS
Automated Process Uncurated Go view Yersinia pestis F1991016 (biovar Orientalis) BAQ-0005939 surE CDS
Automated Process Uncurated Go view Yersinia pestis FV-1 (biovar Orientalis) BAK-0002007 CDS
Automated Process Uncurated Go view Yersinia pestis IP275 (biovar Orientalis) BAC-0005921 surE CDS
Automated Process Uncurated Go view Yersinia pestis K1973002 (biovar Mediaevalis) BAO-0004274 surE CDS
Automated Process Uncurated Go view Yersinia pestis KIM (biovar Mediaevalis) ABI-0030468 surE CDS
Automated Process Uncurated Go view Yersinia pestis MG05-1020 (biovar Orientalis) BAP-0007383 surE CDS
Automated Process Uncurated Go view Yersinia pestis Nepal516 (biovar Antiqua) BAD-0000896 surE CDS
Automated Process Uncurated Go view Yersinia pestis Pestoides F (biovar Pestoides) BAI-0003593 CDS
Automated Process Uncurated Go view Yersinia pestis UG05-0454 (biovar Antiqua) BAN-0004773 surE CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP31758 ADS-0007311 surE CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP32953 ACZ-0000815 surE CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis PB1/+ AFV-0000950 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis YPIII AFW-0004070 CDS
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 2955077 to 2965838
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
AEC-0000001sourceforward14686137Contains
AEC-0002567ygbMCDSforward29548002955576Downstream
AEC-0002568ygbNCDSforward29556652957029Downstream
AEC-0002569rpoSCDScomplement29571232958115Downstream
AEC-0002570nlpDCDScomplement29581782959317Downstream
AEC-0002571pcmCDScomplement29594572960083Overlaps Downstream
AEC-0002572surECDScomplement29600772960838Matches
AEC-0002573truDCDScomplement29608192961868Overlaps Upstream
AEC-0002574ispFCDScomplement29618652962344Upstream
AEC-0002575ispDCDScomplement29623442963054Upstream
AEC-0002576ftsBCDScomplement29630732963384Upstream
AEC-0002577ygbECDScomplement29635782963901Upstream
AEC-0002578cysCCDScomplement29639512964556Upstream
AEC-0002579cysNCDScomplement29645562965983Upstream
Release Notes to toptop
submitted to GenBank; assigned accession number CP000948