Escherichia coli K-12 DH10B
Working With: Genome: Escherichia coli K-12 DH10B Version: 10

AEC-0002579 (cysN) - Escherichia coli K-12 DH10B - Feature Annotation

ASAP ID
AEC-0002579 showshow history
Names
cysN ECDH10B_2919
Product
sulfate adenylyltransferase, subunit 1
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome complement 2964556 2965983 1428 476
Sequence

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Context

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InterProScan
BLASTP
Protein Families to toptop
Author Approval Family Annotated
Automated Process Approved IPR000795 (IPR000795 Translational (tr)-type GTP-binding domain) Jul 2009
Automated Process Approved IPR009000 (IPR009000 Translation protein, beta-barrel domain superfamily) Jul 2009
Automated Process Approved IPR009001 (IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal) Jul 2009
Automated Process Approved IPR004161 (IPR004161 Translation elongation factor EFTu-like, domain 2) Jul 2009
Automated Process Approved IPR011779 (IPR011779 Sulphate adenylyltransferase, large subunit) Jul 2009
Protein Domains to toptop
Internal error getting result
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Automated Process Approved GO molecular function GO:0016772 transferase activity, transferring phosphorus-containing groups GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR011779
Reference: Escherichia coli K-12 DH10B
Jul 2009
Automated Process Approved GO molecular function GO:0005525 GTP binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR000795
Reference: Escherichia coli K-12 DH10B
Jul 2009
Automated Process Approved GO molecular function GO:0003924 GTPase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR000795
Reference: Escherichia coli K-12 DH10B
Jul 2009
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Approved name cysN Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0009026
Reference: Escherichia coli K-12 MG1655
Mar 2007
Person Approved locus tag ECDH10B_2919 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu
Reference: Escherichia coli K-12 DH10B
Feb 2008
Product
Person Approved product sulfate adenylyltransferase, subunit 1 Published Annotation - PubMed ID: 16397293
Reference: Escherichia coli K-12
Mar 2007
Protein Family
Automated Process Approved protein family IPR000795 Translational (tr)-type GTP-binding domain Protein Sequence Similarity - InterPro Domain: IPR000795
Reference: Escherichia coli K-12 DH10B
Jul 2009
Automated Process Approved protein family IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal Protein Sequence Similarity - InterPro Domain: IPR009001
Reference: Escherichia coli K-12 DH10B
Jul 2009
Automated Process Approved protein family IPR011779 Sulphate adenylyltransferase, large subunit Protein Sequence Similarity - InterPro Domain: IPR011779
Reference: Escherichia coli K-12 DH10B
Jul 2009
Automated Process Approved protein family IPR009000 Translation protein, beta-barrel domain superfamily Protein Sequence Similarity - InterPro Domain: IPR009000
Reference: Escherichia coli K-12 DH10B
Jul 2009
Automated Process Approved protein family IPR004161 Translation elongation factor EFTu-like, domain 2 Protein Sequence Similarity - InterPro Domain: IPR004161
Reference: Escherichia coli K-12 DH10B
Jul 2009
Other
Person Approved comment 100% identical to E. coli K-12 MG1655 feature ABE-0009026 Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0009026
Reference: Escherichia coli K-12 MG1655
Mar 2007
Gene Ontology
Automated Process Approved GO molecular function GO:0005525 GTP binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR000795
Reference: Escherichia coli K-12 DH10B
Jul 2009
Automated Process Approved GO molecular function GO:0016772 transferase activity, transferring phosphorus-containing groups GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR011779
Reference: Escherichia coli K-12 DH10B
Jul 2009
Automated Process Approved GO molecular function GO:0003924 GTPase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR000795
Reference: Escherichia coli K-12 DH10B
Jul 2009
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0000565 cysN CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0000923 cysN CDS
Ortholog
Automated Process Uncurated Go view Dickeya dadantii 3937 ABF-0020435 cysN CDS
Automated Process Uncurated Go view Erwinia tasmaniensis Et1/99 [T] AFI-0002800 cysN CDS
Automated Process Uncurated Go view Escherichia albertii TW07627 AFX-0002793 cysN CDS
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0008235 cysN CDS
Automated Process Uncurated Go view Escherichia coli 536 (UPEC) AEF-0002762 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0008411 CDS
Automated Process Uncurated Go view Escherichia coli APEC O1 (APEC) AEG-0002753 cysN CDS
Automated Process Uncurated Go view Escherichia coli ATCC 8739 AEM-0006466 CDS
Automated Process Uncurated Go view Escherichia coli B171 (EPEC) ADN-0007461 cysN CDS
Automated Process Uncurated Go view Escherichia coli B7A (ETEC) ADK-0006978 CDS
Automated Process Uncurated Go view Escherichia coli CFT073 (UPEC) ABR-0079474 cysN CDS
Automated Process Uncurated Go view Escherichia coli E110019 (EPEC) ADM-0008124 cysN CDS
Automated Process Uncurated Go view Escherichia coli E22 (EPEC) ADL-0008862 cysN CDS
Automated Process Uncurated Go view Escherichia coli E2348/69 (EPEC) BCI-0003214 cysN CDS
Automated Process Uncurated Go view Escherichia coli E24377A (ETEC) ADO-0007488 cysN CDS
Automated Process Uncurated Go view Escherichia coli EC4024 (EHEC) BBI-0000165 CDS
Automated Process Uncurated Go view Escherichia coli EC4042 (EHEC) BBA-0007342 cysN CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0005862 cysN CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0005338 cysN CDS
Automated Process Uncurated Go view Escherichia coli EC4113 (EHEC) BAY-0008036 cysN CDS
Automated Process Uncurated Go view Escherichia coli EC4115 (EHEC) BAS-0008839 cysN CDS
Automated Process Uncurated Go view Escherichia coli EC4196 (EHEC) BAX-0007359 cysN CDS
Automated Process Uncurated Go view Escherichia coli EC4206 (EHEC) BAW-0006633 cysN CDS
Automated Process Uncurated Go view Escherichia coli EC4401 (EHEC) BAV-0007456 cysN CDS
Automated Process Uncurated Go view Escherichia coli EC4486 (EHEC) BAU-0008275 cysN CDS
Automated Process Uncurated Go view Escherichia coli EC4501 (EHEC) BAT-0008433 cysN CDS
Automated Process Uncurated Go view Escherichia coli EC508 (EHEC) BBJ-0007883 cysN CDS
Automated Process Uncurated Go view Escherichia coli EC869 (EHEC) BBC-0008310 cysN CDS
Automated Process Uncurated Go view Escherichia coli EDL933 (EHEC) ABH-0027730 cysN CDS
Automated Process Uncurated Go view Escherichia coli F11 (UPEC) ADQ-0006174 cysN CDS
Automated Process Uncurated Go view Escherichia coli HS ADR-0007564 cysN CDS
Person Uncurated Go view Escherichia coli K-12 MG1655 ABE-0009026 cysN CDS
Automated Process Uncurated Go view Escherichia coli K-12 W3110 ADY-0002820 cysN CDS
Automated Process Uncurated Go view Escherichia coli SE11 AFS-0003060 CDS
Automated Process Uncurated Go view Escherichia coli SMS-3-5 AFT-0002875 cysN CDS
Automated Process Uncurated Go view Escherichia coli Sakai (EHEC) ACA-0133641 cysN CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0000897 CDS
Automated Process Uncurated Go view Escherichia coli UTI89 (UPEC) AEA-0003131 cysN CDS
Automated Process Uncurated Go view Pectobacterium atrosepticum SCRI1043 ABL-0063856 cysN CDS
Automated Process Uncurated Go view Pectobacterium brasiliensis 1692 AED-0002042 cysN CDS
Automated Process Uncurated Go view Pectobacterium carotovorum WPP14 ADT-0000911 cysN CDS
Automated Process Uncurated Go view Pectobacterium parmentieri WPP163 AFJ-0003975 cysN CDS
Automated Process Uncurated Go view Salmonella Agona SL483 BBX-0007226 CDS
Automated Process Uncurated Go view Salmonella Arizonae CDC 346-86 BCD-0000024 CDS
Automated Process Uncurated Go view Salmonella Choleraesuis SC-B67 ADB-0003352 cysN CDS
Automated Process Uncurated Go view Salmonella Dublin CT_02021853 BCB-0007500 CDS
Automated Process Uncurated Go view Salmonella Enteritidis P125109 BCF-0009046 cysN CDS
Automated Process Uncurated Go view Salmonella Gallinarum 287/91 BCG-0008586 cysN CDS
Automated Process Uncurated Go view Salmonella Hadar RI_05P066 BBT-0006465 CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL476 BBV-0007483 CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL486 BBW-0006443 CDS
Automated Process Uncurated Go view Salmonella Javiana GA_MM04042433 BCA-0005478 CDS
Automated Process Uncurated Go view Salmonella Kentucky CDC 191 BBZ-0005500 cysN CDS
Automated Process Uncurated Go view Salmonella Kentucky CVM29188 BBP-0006608 cysN CDS
Automated Process Uncurated Go view Salmonella Newport SL254 BBQ-0007499 CDS
Automated Process Uncurated Go view Salmonella Newport SL317 BBR-0005560 CDS
Automated Process Uncurated Go view Salmonella Paratyphi A AKU_12601 BCH-0002818 CDS
Automated Process Uncurated Go view Salmonella Paratyphi A ATCC 9150 ADA-0002789 cysN CDS
Automated Process Uncurated Go view Salmonella Paratyphi B SPB7 BCC-0003664 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA23 BBN-0007661 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA29 BBM-0005560 CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund CVM19633 BBO-0007157 CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund SL480 BBY-0005366 CDS
Automated Process Uncurated Go view Salmonella Typhi CT18 ABX-0111589 cysN CDS
Automated Process Uncurated Go view Salmonella Typhi Ty2 ABS-0084552 cysN CDS
Automated Process Uncurated Go view Salmonella Typhimurium LT2 [T] ABU-0099163 cysN CDS
Automated Process Uncurated Go view Salmonella Virchow SL491 BBS-0006359 CDS
Automated Process Uncurated Go view Salmonella Weltevreden SL484 BBU-0006705 CDS
Automated Process Uncurated Go view Salmonella enterica CVM23701 BBL-0007339 CDS
Automated Process Uncurated Go view Shigella boydii 227 ADV-0003049 cysN CDS
Automated Process Uncurated Go view Shigella boydii BS512 ADJ-0008535 cysN CDS
Automated Process Uncurated Go view Shigella dysenteriae 1012 BAA-0003827 cysN CDS
Automated Process Uncurated Go view Shigella dysenteriae 197 ADU-0003371 cysN CDS
Automated Process Uncurated Go view Shigella flexneri 2457T ABQ-0074136 cysN CDS
Automated Process Uncurated Go view Shigella flexneri 301 ABT-0089025 cysN CDS
Automated Process Uncurated Go view Shigella flexneri 8401 BAG-0002935 cysN CDS
Automated Process Uncurated Go view Shigella sonnei 046 ADD-0003169 cysN CDS
Automated Process Uncurated Go view Yersinia bercovieri ATCC 43970 [T] AEK-0003196 CDS
Automated Process Uncurated Go view Yersinia enterocolitica 8081 BAH-0002366 cysN CDS
Automated Process Uncurated Go view Yersinia frederiksenii ATCC 33641 [T] AEI-0000112 cysN CDS
Automated Process Uncurated Go view Yersinia intermedia ATCC 29909 [T] AEH-0000486 cysN CDS
Automated Process Uncurated Go view Yersinia mollaretii ATCC 43969 [T] AEJ-0000907 CDS
Automated Process Uncurated Go view Yersinia pestis 91001 (biovar Microtus) ACQ-0234936 cysN CDS
Automated Process Uncurated Go view Yersinia pestis Angola (biovar Pestoides) ADI-0005074 cysN CDS
Automated Process Uncurated Go view Yersinia pestis Antiqua (biovar Antiqua) BAE-0003335 cysN CDS
Automated Process Uncurated Go view Yersinia pestis B42003004 (biovar Antiqua) BAL-0008150 cysN CDS
Automated Process Uncurated Go view Yersinia pestis CA88-4125 (biovar Orientalis) BAF-0003990 cysN CDS
Automated Process Uncurated Go view Yersinia pestis CO92 (biovar Orientalis) ABY-0126655 cysN CDS
Automated Process Uncurated Go view Yersinia pestis E1979001 (biovar Antiqua) BAM-0006441 cysN CDS
Automated Process Uncurated Go view Yersinia pestis F1991016 (biovar Orientalis) BAQ-0005932 cysN CDS
Automated Process Uncurated Go view Yersinia pestis FV-1 (biovar Orientalis) BAK-0002000 CDS
Automated Process Uncurated Go view Yersinia pestis IP275 (biovar Orientalis) BAC-0005914 cysN CDS
Automated Process Uncurated Go view Yersinia pestis K1973002 (biovar Mediaevalis) BAO-0004267 cysN CDS
Automated Process Uncurated Go view Yersinia pestis KIM (biovar Mediaevalis) ABI-0030461 cysN CDS
Automated Process Uncurated Go view Yersinia pestis MG05-1020 (biovar Orientalis) BAP-0007376 cysN CDS
Automated Process Uncurated Go view Yersinia pestis Nepal516 (biovar Antiqua) BAD-0000889 cysN CDS
Automated Process Uncurated Go view Yersinia pestis Pestoides F (biovar Pestoides) BAI-0003586 CDS
Automated Process Uncurated Go view Yersinia pestis UG05-0454 (biovar Antiqua) BAN-0004766 cysN CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP31758 ADS-0007318 cysN CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP32953 ACZ-0000808 cysN CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis PB1/+ AFV-0000943 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis YPIII AFW-0004077 CDS
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 2959556 to 2970983
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
AEC-0000001sourceforward14686137Contains
AEC-0002571pcmCDScomplement29594572960083Downstream
AEC-0002572surECDScomplement29600772960838Downstream
AEC-0002573truDCDScomplement29608192961868Downstream
AEC-0002574ispFCDScomplement29618652962344Downstream
AEC-0002575ispDCDScomplement29623442963054Downstream
AEC-0002576ftsBCDScomplement29630732963384Downstream
AEC-0002577ygbECDScomplement29635782963901Downstream
AEC-0002578cysCCDScomplement29639512964556Overlaps Downstream
AEC-0002579cysNCDScomplement29645562965983Matches
AEC-0002580cysDCDScomplement29659852966893Upstream
AEC-0002581iapCDSforward29671452968182Upstream
AEC-0002582ygbFCDScomplement29691332969417Upstream
AEC-0002583ygbTCDScomplement29694192970336Upstream
AEC-0002584ygcHCDScomplement29703522970951Upstream
AEC-0002585ygcICDScomplement29709382971612Upstream
Release Notes to toptop
submitted to GenBank; assigned accession number CP000948