Escherichia coli K-12 DH10B
Working With: Genome: Escherichia coli K-12 DH10B Version: 10

AEC-0002580 (cysD) - Escherichia coli K-12 DH10B - Feature Annotation

ASAP ID
AEC-0002580 showshow history
Names
cysD ECDH10B_2920
Product
sulfate adenylyltransferase, subunit 2
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome complement 2965985 2966893 909 303
Sequence

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Context

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Pre-Run Search Results
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InterProScan
BLASTP
Protein Families to toptop
Author Approval Family Annotated
Automated Process Approved IPR014729 (IPR014729 Rossmann-like alpha/beta/alpha sandwich fold) Jul 2009
Automated Process Approved IPR011784 (IPR011784 Sulphate adenylyltransferase, small subunit) Jul 2009
Automated Process Approved IPR002500 (IPR002500 Phosphoadenosine phosphosulphate reductase) Jul 2009
Protein Domains to toptop
Internal error getting result
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Automated Process Approved GO biological process GO:0008152 metabolic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR002500
Reference: Escherichia coli K-12 DH10B
Jul 2009
Automated Process Approved GO molecular function GO:0016740 transferase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR002500
Reference: Escherichia coli K-12 DH10B
Jul 2009
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Approved name cysD Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0009029
Reference: Escherichia coli K-12 MG1655
Mar 2007
Person Approved locus tag ECDH10B_2920 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu
Reference: Escherichia coli K-12 DH10B
Feb 2008
Product
Person Approved product sulfate adenylyltransferase, subunit 2 Published Annotation - PubMed ID: 16397293
Reference: Escherichia coli K-12
Mar 2007
Protein Family
Automated Process Approved protein family IPR011784 Sulphate adenylyltransferase, small subunit Protein Sequence Similarity - InterPro Domain: IPR011784
Reference: Escherichia coli K-12 DH10B
Jul 2009
Automated Process Approved protein family IPR002500 Phosphoadenosine phosphosulphate reductase Protein Sequence Similarity - InterPro Domain: IPR002500
Reference: Escherichia coli K-12 DH10B
Jul 2009
Automated Process Approved protein family IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Protein Sequence Similarity - InterPro Domain: IPR014729
Reference: Escherichia coli K-12 DH10B
Jul 2009
Other
Person Approved comment 100% identical to E. coli K-12 MG1655 feature ABE-0009029 Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0009029
Reference: Escherichia coli K-12 MG1655
Mar 2007
Gene Ontology
Automated Process Approved GO biological process GO:0008152 metabolic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR002500
Reference: Escherichia coli K-12 DH10B
Jul 2009
Automated Process Approved GO molecular function GO:0016740 transferase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR002500
Reference: Escherichia coli K-12 DH10B
Jul 2009
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0000645 cysD CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0000946 cysD CDS
Ortholog
Automated Process Uncurated Go view Dickeya dadantii 3937 ABF-0014888 cysD CDS
Automated Process Uncurated Go view Erwinia tasmaniensis Et1/99 [T] AFI-0002801 cysD CDS
Automated Process Uncurated Go view Escherichia albertii TW07627 AFX-0002792 cysD CDS
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0008234 cysD CDS
Automated Process Uncurated Go view Escherichia coli 536 (UPEC) AEF-0002763 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0008410 CDS
Automated Process Uncurated Go view Escherichia coli APEC O1 (APEC) AEG-0002754 cysD CDS
Automated Process Uncurated Go view Escherichia coli ATCC 8739 AEM-0006465 CDS
Automated Process Uncurated Go view Escherichia coli B171 (EPEC) ADN-0007462 cysD CDS
Automated Process Uncurated Go view Escherichia coli B7A (ETEC) ADK-0006977 CDS
Automated Process Uncurated Go view Escherichia coli CFT073 (UPEC) ABR-0079475 cysD CDS
Automated Process Uncurated Go view Escherichia coli E110019 (EPEC) ADM-0008123 cysD CDS
Automated Process Uncurated Go view Escherichia coli E22 (EPEC) ADL-0008863 cysD CDS
Automated Process Uncurated Go view Escherichia coli E2348/69 (EPEC) BCI-0003215 cysD CDS
Automated Process Uncurated Go view Escherichia coli E24377A (ETEC) ADO-0007489 cysD CDS
Automated Process Uncurated Go view Escherichia coli EC4024 (EHEC) BBI-0000166 CDS
Automated Process Uncurated Go view Escherichia coli EC4042 (EHEC) BBA-0007343 cysD CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0005863 cysD CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0005339 cysD CDS
Automated Process Uncurated Go view Escherichia coli EC4113 (EHEC) BAY-0008035 cysD CDS
Automated Process Uncurated Go view Escherichia coli EC4115 (EHEC) BAS-0008840 cysD CDS
Automated Process Uncurated Go view Escherichia coli EC4196 (EHEC) BAX-0007358 cysD CDS
Automated Process Uncurated Go view Escherichia coli EC4206 (EHEC) BAW-0006634 cysD CDS
Automated Process Uncurated Go view Escherichia coli EC4401 (EHEC) BAV-0007457 cysD CDS
Automated Process Uncurated Go view Escherichia coli EC4486 (EHEC) BAU-0008276 cysD CDS
Automated Process Uncurated Go view Escherichia coli EC4501 (EHEC) BAT-0008432 cysD CDS
Automated Process Uncurated Go view Escherichia coli EC508 (EHEC) BBJ-0007882 cysD CDS
Automated Process Uncurated Go view Escherichia coli EC869 (EHEC) BBC-0008311 cysD CDS
Automated Process Uncurated Go view Escherichia coli EDL933 (EHEC) ABH-0027731 cysD CDS
Automated Process Uncurated Go view Escherichia coli F11 (UPEC) ADQ-0006173 cysD CDS
Automated Process Uncurated Go view Escherichia coli HS ADR-0007565 cysD CDS
Person Uncurated Go view Escherichia coli K-12 MG1655 ABE-0009029 cysD CDS
Automated Process Uncurated Go view Escherichia coli K-12 W3110 ADY-0002821 cysD CDS
Automated Process Uncurated Go view Escherichia coli SE11 AFS-0003061 CDS
Automated Process Uncurated Go view Escherichia coli SMS-3-5 AFT-0002876 cysD CDS
Automated Process Uncurated Go view Escherichia coli Sakai (EHEC) ACA-0133642 cysD CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0000898 CDS
Automated Process Uncurated Go view Escherichia coli UTI89 (UPEC) AEA-0003132 cysD CDS
Automated Process Uncurated Go view Pectobacterium atrosepticum SCRI1043 ABL-0063857 cysD CDS
Automated Process Uncurated Go view Pectobacterium brasiliensis 1692 AED-0002043 cysD CDS
Automated Process Uncurated Go view Pectobacterium carotovorum WPP14 ADT-0003115 cysD CDS
Automated Process Uncurated Go view Pectobacterium parmentieri WPP163 AFJ-0003976 cysD CDS
Automated Process Uncurated Go view Salmonella Agona SL483 BBX-0007227 cysD CDS
Automated Process Uncurated Go view Salmonella Arizonae CDC 346-86 BCD-0000023 CDS
Automated Process Uncurated Go view Salmonella Choleraesuis SC-B67 ADB-0003353 cysD CDS
Automated Process Uncurated Go view Salmonella Dublin CT_02021853 BCB-0007501 cysD CDS
Automated Process Uncurated Go view Salmonella Enteritidis P125109 BCF-0009051 cysD CDS
Automated Process Uncurated Go view Salmonella Gallinarum 287/91 BCG-0008591 cysD CDS
Automated Process Uncurated Go view Salmonella Hadar RI_05P066 BBT-0006464 cysD CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL476 BBV-0007484 cysD CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL486 BBW-0006444 cysD CDS
Automated Process Uncurated Go view Salmonella Javiana GA_MM04042433 BCA-0005479 cysD CDS
Automated Process Uncurated Go view Salmonella Kentucky CDC 191 BBZ-0005501 cysD CDS
Automated Process Uncurated Go view Salmonella Kentucky CVM29188 BBP-0006609 cysD CDS
Automated Process Uncurated Go view Salmonella Newport SL254 BBQ-0007500 cysD CDS
Automated Process Uncurated Go view Salmonella Newport SL317 BBR-0005559 cysD CDS
Automated Process Uncurated Go view Salmonella Paratyphi A AKU_12601 BCH-0002819 CDS
Automated Process Uncurated Go view Salmonella Paratyphi A ATCC 9150 ADA-0002790 cysD CDS
Automated Process Uncurated Go view Salmonella Paratyphi B SPB7 BCC-0003665 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA23 BBN-0007662 cysD CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA29 BBM-0005559 cysD CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund CVM19633 BBO-0007158 cysD CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund SL480 BBY-0005367 cysD CDS
Automated Process Uncurated Go view Salmonella Typhi CT18 ABX-0111593 cysD CDS
Automated Process Uncurated Go view Salmonella Typhi Ty2 ABS-0084553 cysD CDS
Automated Process Uncurated Go view Salmonella Typhimurium LT2 [T] ABU-0099167 cysD CDS
Automated Process Uncurated Go view Salmonella Virchow SL491 BBS-0006358 CDS
Automated Process Uncurated Go view Salmonella Weltevreden SL484 BBU-0006704 cysD CDS
Automated Process Uncurated Go view Salmonella enterica CVM23701 BBL-0007340 cysD CDS
Automated Process Uncurated Go view Shigella boydii 227 ADV-0003048 cysD CDS
Automated Process Uncurated Go view Shigella boydii BS512 ADJ-0008534 cysD CDS
Automated Process Uncurated Go view Shigella dysenteriae 1012 BAA-0003826 cysD CDS
Automated Process Uncurated Go view Shigella dysenteriae 197 ADU-0003372 cysD CDS
Automated Process Uncurated Go view Shigella flexneri 2457T ABQ-0074137 cysD CDS
Automated Process Uncurated Go view Shigella flexneri 301 ABT-0089026 cysD CDS
Automated Process Uncurated Go view Shigella flexneri 8401 BAG-0002934 cysD CDS
Automated Process Uncurated Go view Shigella sonnei 046 ADD-0003170 cysD CDS
Automated Process Uncurated Go view Yersinia bercovieri ATCC 43970 [T] AEK-0003197 CDS
Automated Process Uncurated Go view Yersinia enterocolitica 8081 BAH-0002364 cysD CDS
Automated Process Uncurated Go view Yersinia frederiksenii ATCC 33641 [T] AEI-0000113 cysD CDS
Automated Process Uncurated Go view Yersinia intermedia ATCC 29909 [T] AEH-0000485 cysD CDS
Automated Process Uncurated Go view Yersinia mollaretii ATCC 43969 [T] AEJ-0000906 CDS
Automated Process Uncurated Go view Yersinia pestis 91001 (biovar Microtus) ACQ-0234935 cysD CDS
Automated Process Uncurated Go view Yersinia pestis Angola (biovar Pestoides) ADI-0005075 cysD CDS
Automated Process Uncurated Go view Yersinia pestis Antiqua (biovar Antiqua) BAE-0003334 cysD CDS
Automated Process Uncurated Go view Yersinia pestis B42003004 (biovar Antiqua) BAL-0008151 cysD CDS
Automated Process Uncurated Go view Yersinia pestis CA88-4125 (biovar Orientalis) BAF-0003989 cysD CDS
Automated Process Uncurated Go view Yersinia pestis CO92 (biovar Orientalis) ABY-0126659 cysD CDS
Automated Process Uncurated Go view Yersinia pestis E1979001 (biovar Antiqua) BAM-0006440 cysD CDS
Automated Process Uncurated Go view Yersinia pestis F1991016 (biovar Orientalis) BAQ-0005931 cysD CDS
Automated Process Uncurated Go view Yersinia pestis IP275 (biovar Orientalis) BAC-0005913 cysD CDS
Automated Process Uncurated Go view Yersinia pestis K1973002 (biovar Mediaevalis) BAO-0004266 cysD CDS
Automated Process Uncurated Go view Yersinia pestis KIM (biovar Mediaevalis) ABI-0030460 cysD CDS
Automated Process Uncurated Go view Yersinia pestis MG05-1020 (biovar Orientalis) BAP-0007375 cysD CDS
Automated Process Uncurated Go view Yersinia pestis Nepal516 (biovar Antiqua) BAD-0000888 cysD CDS
Automated Process Uncurated Go view Yersinia pestis Pestoides F (biovar Pestoides) BAI-0003585 CDS
Automated Process Uncurated Go view Yersinia pestis UG05-0454 (biovar Antiqua) BAN-0004765 cysD CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP31758 ADS-0007319 cysD CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP32953 ACZ-0000807 cysD CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis PB1/+ AFV-0000942 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis YPIII AFW-0004078 CDS
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 2960985 to 2971893
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
AEC-0000001sourceforward14686137Contains
AEC-0002573truDCDScomplement29608192961868Downstream
AEC-0002574ispFCDScomplement29618652962344Downstream
AEC-0002575ispDCDScomplement29623442963054Downstream
AEC-0002576ftsBCDScomplement29630732963384Downstream
AEC-0002577ygbECDScomplement29635782963901Downstream
AEC-0002578cysCCDScomplement29639512964556Downstream
AEC-0002579cysNCDScomplement29645562965983Downstream
AEC-0002580cysDCDScomplement29659852966893Matches
AEC-0002581iapCDSforward29671452968182Upstream
AEC-0002582ygbFCDScomplement29691332969417Upstream
AEC-0002583ygbTCDScomplement29694192970336Upstream
AEC-0002584ygcHCDScomplement29703522970951Upstream
AEC-0002585ygcICDScomplement29709382971612Upstream
AEC-0002586ygcJCDScomplement29716152972706Upstream
Release Notes to toptop
submitted to GenBank; assigned accession number CP000948