Escherichia coli K-12 DH10B
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Working With: Genome: Escherichia coli K-12 DH10B Version: 10

AEC-0002636 (mltA) - Escherichia coli K-12 DH10B - Feature Annotation

ASAP ID
AEC-0002636 showshow history
Names
mltA ECDH10B_2983
Product
membrane-bound lytic murein transglycosylase A
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome complement 3037973 3039070 1098 366
Sequence

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Context

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InterProScan
BLASTP
Protein Families to toptop
Author Approval Family Annotated
Automated Process Approved IPR005300 (IPR005300 Lytic transglycosylase MltA, domain B) Jul 2009
Automated Process Approved IPR010611 (IPR010611 3D domain) Jul 2009
Protein Domains to toptop
Internal error getting result
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Automated Process Approved GO biological process GO:0009254 peptidoglycan turnover GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR010611
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO cellular component GO:0019867 outer membrane GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR010611
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR005300
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Approved name mltA Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0009228
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Person Approved locus tag ECDH10B_2983 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu
Reference: Escherichia coli K-12 DH10B 		Feb 2008
Product
Person Approved product membrane-bound lytic murein transglycosylase A Published Annotation - PubMed ID: 16397293
Reference: Escherichia coli K-12 		Mar 2007
Protein Family
Automated Process Approved protein family IPR005300 Lytic transglycosylase MltA, domain B Protein Sequence Similarity - InterPro Domain: IPR005300
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR010611 3D domain Protein Sequence Similarity - InterPro Domain: IPR010611
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Other
Person Approved comment 100% identical to E. coli K-12 MG1655 feature ABE-0009228 Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0009228
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Gene Ontology
Automated Process Approved GO biological process GO:0009254 peptidoglycan turnover GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR010611
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO cellular component GO:0019867 outer membrane GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR010611
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR005300
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0001948 mltA CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0001691 mltA CDS
Ortholog
Automated Process Uncurated Go view Dickeya dadantii 3937 ABF-0015922 mltA CDS
Automated Process Uncurated Go view Erwinia tasmaniensis Et1/99 [T] AFI-0002836 mltA CDS
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0009231 mltA CDS
Automated Process Uncurated Go view Escherichia coli 536 (UPEC) AEF-0002825 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0008337 mltA CDS
Automated Process Uncurated Go view Escherichia coli APEC O1 (APEC) AEG-0002809 mltA CDS
Automated Process Uncurated Go view Escherichia coli ATCC 8739 AEM-0006393 CDS
Automated Process Uncurated Go view Escherichia coli B171 (EPEC) ADN-0005874 mltA CDS
Automated Process Uncurated Go view Escherichia coli B7A (ETEC) ADK-0010006 CDS
Automated Process Uncurated Go view Escherichia coli CFT073 (UPEC) ABR-0079539 mltA CDS
Automated Process Uncurated Go view Escherichia coli E110019 (EPEC) ADM-0010173 mltA CDS
Automated Process Uncurated Go view Escherichia coli E22 (EPEC) ADL-0008939 mltA CDS
Automated Process Uncurated Go view Escherichia coli E2348/69 (EPEC) BCI-0003275 mltA CDS
Automated Process Uncurated Go view Escherichia coli E24377A (ETEC) ADO-0007555 mltA CDS
Automated Process Uncurated Go view Escherichia coli EC4024 (EHEC) BBI-0004175 CDS
Automated Process Uncurated Go view Escherichia coli EC4042 (EHEC) BBA-0007416 mltA CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0005936 mltA CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0005413 mltA CDS
Automated Process Uncurated Go view Escherichia coli EC4113 (EHEC) BAY-0009133 mltA CDS
Automated Process Uncurated Go view Escherichia coli EC4115 (EHEC) BAS-0008914 mltA CDS
Automated Process Uncurated Go view Escherichia coli EC4196 (EHEC) BAX-0010230 mltA CDS
Automated Process Uncurated Go view Escherichia coli EC4206 (EHEC) BAW-0006714 mltA CDS
Automated Process Uncurated Go view Escherichia coli EC4401 (EHEC) BAV-0010090 mltA CDS
Automated Process Uncurated Go view Escherichia coli EC4486 (EHEC) BAU-0006210 mltA CDS
Automated Process Uncurated Go view Escherichia coli EC4501 (EHEC) BAT-0010187 mltA CDS
Automated Process Uncurated Go view Escherichia coli EC508 (EHEC) BBJ-0009377 mltA CDS
Automated Process Uncurated Go view Escherichia coli EC869 (EHEC) BBC-0008386 mltA CDS
Automated Process Uncurated Go view Escherichia coli EDL933 (EHEC) ABH-0027802 mltA CDS
Automated Process Uncurated Go view Escherichia coli F11 (UPEC) ADQ-0006104 mltA CDS
Automated Process Uncurated Go view Escherichia coli HS ADR-0007635 mltA CDS
Person Uncurated Go view Escherichia coli K-12 MG1655 ABE-0009228 mltA CDS
Automated Process Uncurated Go view Escherichia coli K-12 W3110 ADY-0002883 mltA CDS
Automated Process Uncurated Go view Escherichia coli SE11 AFS-0003130 CDS
Automated Process Uncurated Go view Escherichia coli SMS-3-5 AFT-0002952 mltA CDS
Automated Process Uncurated Go view Escherichia coli Sakai (EHEC) ACA-0133711 mltA CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0000970 CDS
Automated Process Uncurated Go view Escherichia coli UTI89 (UPEC) AEA-0003195 mltA CDS
Automated Process Uncurated Go view Pectobacterium atrosepticum SCRI1043 ABL-0061241 mltA CDS
Automated Process Uncurated Go view Pectobacterium brasiliensis 1692 AED-0002825 mltA CDS
Automated Process Uncurated Go view Pectobacterium carotovorum WPP14 ADT-0000245 mltA CDS
Automated Process Uncurated Go view Pectobacterium parmentieri WPP163 AFJ-0001642 mltA CDS
Automated Process Uncurated Go view Salmonella Arizonae CDC 346-86 BCD-0004904 CDS
Automated Process Uncurated Go view Salmonella Choleraesuis SC-B67 ADB-0003425 mltA CDS
Automated Process Uncurated Go view Salmonella Enteritidis P125109 BCF-0009225 mltA CDS
Automated Process Uncurated Go view Salmonella Gallinarum 287/91 BCG-0008758 mltA CDS
Automated Process Uncurated Go view Salmonella Paratyphi A AKU_12601 BCH-0002881 CDS
Automated Process Uncurated Go view Salmonella Paratyphi A ATCC 9150 ADA-0002852 mltA CDS
Automated Process Uncurated Go view Salmonella Paratyphi B SPB7 BCC-0003734 CDS
Automated Process Uncurated Go view Salmonella Typhi CT18 ABX-0111703 mltA CDS
Automated Process Uncurated Go view Salmonella Typhi Ty2 ABS-0084614 mltA CDS
Automated Process Uncurated Go view Salmonella Typhimurium LT2 [T] ABU-0099326 mltA CDS
Automated Process Uncurated Go view Shigella boydii 227 ADV-0002972 mltA CDS
Automated Process Uncurated Go view Shigella boydii BS512 ADJ-0008468 mltA CDS
Automated Process Uncurated Go view Shigella dysenteriae 1012 BAA-0007769 mltA CDS
Automated Process Uncurated Go view Shigella dysenteriae 197 ADU-0003464 mltA CDS
Automated Process Uncurated Go view Shigella flexneri 2457T ABQ-0074199 mltA CDS
Automated Process Uncurated Go view Shigella flexneri 301 ABT-0089078 mltA CDS
Automated Process Uncurated Go view Shigella flexneri 8401 BAG-0003086 mltA CDS
Automated Process Uncurated Go view Shigella sonnei 046 ADD-0003246 mltA CDS
Automated Process Uncurated Go view Yersinia bercovieri ATCC 43970 [T] AEK-0003556 CDS
Automated Process Uncurated Go view Yersinia enterocolitica 8081 BAH-0009574 CDS
Automated Process Uncurated Go view Yersinia frederiksenii ATCC 33641 [T] AEI-0003432 mltA CDS
Automated Process Uncurated Go view Yersinia intermedia ATCC 29909 [T] AEH-0002463 mltA CDS
Automated Process Uncurated Go view Yersinia mollaretii ATCC 43969 [T] AEJ-0000537 CDS
Automated Process Uncurated Go view Yersinia pestis 91001 (biovar Microtus) ACQ-0241113 mltA CDS
Automated Process Uncurated Go view Yersinia pestis Angola (biovar Pestoides) ADI-0007346 mltA CDS
Automated Process Uncurated Go view Yersinia pestis Antiqua (biovar Antiqua) BAE-0000611 mltA CDS
Automated Process Uncurated Go view Yersinia pestis CA88-4125 (biovar Orientalis) BAF-0002335 mltA CDS
Automated Process Uncurated Go view Yersinia pestis CO92 (biovar Orientalis) ABY-0118636 mltA CDS
Automated Process Uncurated Go view Yersinia pestis F1991016 (biovar Orientalis) BAQ-0007368 mltA CDS
Automated Process Uncurated Go view Yersinia pestis FV-1 (biovar Orientalis) BAK-0000847 CDS
Automated Process Uncurated Go view Yersinia pestis IP275 (biovar Orientalis) BAC-0009234 mltA CDS
Automated Process Uncurated Go view Yersinia pestis K1973002 (biovar Mediaevalis) BAO-0006434 mltA CDS
Automated Process Uncurated Go view Yersinia pestis KIM (biovar Mediaevalis) ABI-0032920 mltA CDS
Automated Process Uncurated Go view Yersinia pestis MG05-1020 (biovar Orientalis) BAP-0005629 mltA CDS
Automated Process Uncurated Go view Yersinia pestis Nepal516 (biovar Antiqua) BAD-0003581 mltA CDS
Automated Process Uncurated Go view Yersinia pestis Pestoides F (biovar Pestoides) BAI-0002020 CDS
Automated Process Uncurated Go view Yersinia pestis UG05-0454 (biovar Antiqua) BAN-0006086 mltA CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP31758 ADS-0004945 mltA CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP32953 ACZ-0003124 mltA CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis PB1/+ AFV-0003754 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis YPIII AFW-0001226 CDS
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 3032973 to 3044070
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
AEC-0000001sourceforward14686137Contains
AEC-0002629ygdECDScomplement30320433033143Downstream
AEC-0002630ygdDCDScomplement30331363033531Downstream
AEC-0002631gcvACDScomplement30335503034467Downstream
AEC-0004271gcvBncRNAforward30345963034793Downstream
AEC-0002632ygdICDScomplement30348103035037Downstream
AEC-0002633csdACDSforward30352293036434Downstream
AEC-0002634ygdKCDSforward30364343036877Downstream
AEC-0002635ygdLCDScomplement30369283037734Downstream
AEC-0002636mltACDScomplement30379733039070Matches
AEC-0004160metZtRNAforward30392793039355Upstream
AEC-0004161metWtRNAforward30393893039465Upstream
AEC-0004162metVtRNAforward30394993039575Upstream
AEC-0002637amiCCDScomplement30396493040902Upstream
AEC-0002638argACDSforward30411343042465Upstream
AEC-0002639recDCDScomplement30425273044353Upstream
Release Notes to toptop
submitted to GenBank; assigned accession number CP000948