Escherichia coli K-12 DH10B
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Working With: Genome: Escherichia coli K-12 DH10B Version: 10

AEC-0002693 (yqeA) - Escherichia coli K-12 DH10B - Feature Annotation

ASAP ID
AEC-0002693 showshow history
Names
yqeA ECDH10B_3049
Product
predicted amino acid kinase
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome forward 3103353 3104285 933 311
Sequence

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View sequence with flanking regions: bases upstream and bases downstream

Context

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InterProScan
BLASTP
Protein Families to toptop
Author Approval Family Annotated
Automated Process Approved IPR003964 (IPR003964 Carbamate kinase) Jul 2009
Automated Process Approved IPR001048 (IPR001048 Aspartate/glutamate/uridylate kinase) Jul 2009
Protein Domains to toptop
Internal error getting result
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Automated Process Approved GO biological process GO:0006525 arginine metabolic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR003964
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO biological process GO:0008652 cellular amino acid biosynthetic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001048
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0008804 carbamate kinase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR003964
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Approved name yqeA Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0009438
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Person Approved locus tag ECDH10B_3049 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu
Reference: Escherichia coli K-12 DH10B 		Feb 2008
Product
Person Approved product predicted amino acid kinase Published Annotation - PubMed ID: 16397293
Reference: Escherichia coli K-12 		Mar 2007
Protein Family
Automated Process Approved protein family IPR003964 Carbamate kinase Protein Sequence Similarity - InterPro Domain: IPR003964
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR001048 Aspartate/glutamate/uridylate kinase Protein Sequence Similarity - InterPro Domain: IPR001048
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Other
Person Approved comment 100% identical to E. coli K-12 MG1655 feature ABE-0009438 Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0009438
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Gene Ontology
Automated Process Approved GO biological process GO:0008652 cellular amino acid biosynthetic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001048
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO biological process GO:0006525 arginine metabolic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR003964
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0008804 carbamate kinase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR003964
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0003914 yqeA CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0004158 yqeA CDS
Ortholog
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0005973 CDS
Automated Process Uncurated Go view Escherichia coli 536 (UPEC) AEF-0002898 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0008270 CDS
Automated Process Uncurated Go view Escherichia coli APEC O1 (APEC) AEG-0002875 yqeA CDS
Automated Process Uncurated Go view Escherichia coli ATCC 8739 AEM-0006315 CDS
Automated Process Uncurated Go view Escherichia coli B171 (EPEC) ADN-0005777 CDS
Automated Process Uncurated Go view Escherichia coli B7A (ETEC) ADK-0006144 CDS
Automated Process Uncurated Go view Escherichia coli CFT073 (UPEC) ABR-0079612 yqeA CDS
Automated Process Uncurated Go view Escherichia coli E110019 (EPEC) ADM-0010821 CDS
Automated Process Uncurated Go view Escherichia coli E22 (EPEC) ADL-0007169 CDS
Automated Process Uncurated Go view Escherichia coli E2348/69 (EPEC) BCI-0003328 yqeA CDS
Automated Process Uncurated Go view Escherichia coli E24377A (ETEC) ADO-0007635 CDS
Automated Process Uncurated Go view Escherichia coli EC4024 (EHEC) BBI-0004245 CDS
Automated Process Uncurated Go view Escherichia coli EC4042 (EHEC) BBA-0007501 CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0006021 CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0005498 CDS
Automated Process Uncurated Go view Escherichia coli EC4113 (EHEC) BAY-0005819 CDS
Automated Process Uncurated Go view Escherichia coli EC4115 (EHEC) BAS-0009000 CDS
Automated Process Uncurated Go view Escherichia coli EC4196 (EHEC) BAX-0008363 CDS
Automated Process Uncurated Go view Escherichia coli EC4206 (EHEC) BAW-0006802 CDS
Automated Process Uncurated Go view Escherichia coli EC4401 (EHEC) BAV-0005786 CDS
Automated Process Uncurated Go view Escherichia coli EC4486 (EHEC) BAU-0006297 CDS
Automated Process Uncurated Go view Escherichia coli EC4501 (EHEC) BAT-0005608 CDS
Automated Process Uncurated Go view Escherichia coli EC508 (EHEC) BBJ-0007719 CDS
Automated Process Uncurated Go view Escherichia coli EC869 (EHEC) BBC-0006037 CDS
Automated Process Uncurated Go view Escherichia coli EDL933 (EHEC) ABH-0027885 yqeA CDS
Automated Process Uncurated Go view Escherichia coli F11 (UPEC) ADQ-0008382 arcC1_2 CDS
Automated Process Uncurated Go view Escherichia coli HS ADR-0007713 CDS
Person Uncurated Go view Escherichia coli K-12 MG1655 ABE-0009438 yqeA CDS
Automated Process Uncurated Go view Escherichia coli K-12 W3110 ADY-0002946 yqeA CDS
Automated Process Uncurated Go view Escherichia coli SE11 AFS-0003199 CDS
Automated Process Uncurated Go view Escherichia coli SMS-3-5 AFT-0003005 CDS
Automated Process Uncurated Go view Escherichia coli Sakai (EHEC) ACA-0133789 yqeA CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0001042 CDS
Automated Process Uncurated Go view Escherichia coli UTI89 (UPEC) AEA-0003268 yqeA CDS
Automated Process Uncurated Go view Shigella boydii 227 ADV-0003405 yqeA CDS
Automated Process Uncurated Go view Shigella dysenteriae 1012 BAA-0005507 CDS
Automated Process Uncurated Go view Shigella sonnei 046 ADD-0003305 yqeA CDS
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 3098353 to 3109285
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
AEC-0000001sourceforward14686137Contains
AEC-0002689ygeWCDSforward30981543099344Upstream
AEC-0002690ygeXCDSforward30994023100598Upstream
AEC-0002691ygeYCDSforward31006563101867Upstream
AEC-0002692hyuACDSforward31019203103305Upstream
AEC-0002693yqeACDSforward31033533104285Matches
AEC-0002694yqeBCDScomplement31045063106131Downstream
AEC-0002695yqeCCDScomplement31061793106949Downstream
AEC-0002696ygfJCDSforward31070523107630Downstream
AEC-0002697ygfKCDSforward31079523111050Downstream
Release Notes to toptop
submitted to GenBank; assigned accession number CP000948