Escherichia coli K-12 DH10B
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Working With: Genome: Escherichia coli K-12 DH10B Version: 10

AEC-0002711 (fldB) - Escherichia coli K-12 DH10B - Feature Annotation

ASAP ID
AEC-0002711 showshow history
Names
fldB ECDH10B_3069
Product
flavodoxin 2
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome forward 3131747 3132268 522 174
Sequence

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Context

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Pre-Run Search Results
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InterProScan
BLASTP
Protein Families to toptop
Author Approval Family Annotated
Automated Process Approved IPR001226 (IPR001226 Flavodoxin, conserved site) Jul 2009
Automated Process Approved IPR010086 (IPR010086 Flavodoxin, long chain) Jul 2009
Automated Process Approved IPR008254 (IPR008254 Flavodoxin/nitric oxide synthase) Jul 2009
Protein Domains to toptop
Internal error getting result
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Automated Process Approved GO molecular function GO:0016491 oxidoreductase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR008254
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0010181 FMN binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001226
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0009055 electron transfer activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001226
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Approved name fldB Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0009503
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Person Approved locus tag ECDH10B_3069 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu
Reference: Escherichia coli K-12 DH10B 		Feb 2008
Product
Person Approved product flavodoxin 2 Published Annotation - PubMed ID: 16397293
Reference: Escherichia coli K-12 		Mar 2007
Protein Family
Automated Process Approved protein family IPR001226 Flavodoxin, conserved site Protein Sequence Similarity - InterPro Domain: IPR001226
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR008254 Flavodoxin/nitric oxide synthase Protein Sequence Similarity - InterPro Domain: IPR008254
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR010086 Flavodoxin, long chain Protein Sequence Similarity - InterPro Domain: IPR010086
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Other
Person Approved comment 100% identical to E. coli K-12 MG1655 feature ABE-0009503 Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0009503
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Gene Ontology
Automated Process Approved GO molecular function GO:0010181 FMN binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001226
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0009055 electron transfer activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001226
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0016491 oxidoreductase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR008254
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0000887 fldB CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0001106 fldB CDS
Ortholog
Automated Process Uncurated Go view Dickeya dadantii 3937 ABF-0018057 fldB CDS
Automated Process Uncurated Go view Erwinia tasmaniensis Et1/99 [T] AFI-0002888 fldB CDS
Automated Process Uncurated Go view Escherichia albertii TW07627 AFX-0002676 fldB CDS
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0005950 fldB CDS
Automated Process Uncurated Go view Escherichia coli 536 (UPEC) AEF-0002918 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0008249 CDS
Automated Process Uncurated Go view Escherichia coli APEC O1 (APEC) AEG-0002895 fldB CDS
Automated Process Uncurated Go view Escherichia coli ATCC 8739 AEM-0006294 CDS
Automated Process Uncurated Go view Escherichia coli B171 (EPEC) ADN-0005755 fldB CDS
Automated Process Uncurated Go view Escherichia coli B7A (ETEC) ADK-0006166 FldB CDS
Automated Process Uncurated Go view Escherichia coli CFT073 (UPEC) ABR-0079636 fldB CDS
Automated Process Uncurated Go view Escherichia coli E110019 (EPEC) ADM-0009181 fldB CDS
Automated Process Uncurated Go view Escherichia coli E22 (EPEC) ADL-0007191 fldB CDS
Automated Process Uncurated Go view Escherichia coli E2348/69 (EPEC) BCI-0003351 fldB CDS
Automated Process Uncurated Go view Escherichia coli E24377A (ETEC) ADO-0007657 fldB CDS
Automated Process Uncurated Go view Escherichia coli EC4024 (EHEC) BBI-0004266 CDS
Automated Process Uncurated Go view Escherichia coli EC4042 (EHEC) BBA-0007523 fldB CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0006043 fldB CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0005520 fldB CDS
Automated Process Uncurated Go view Escherichia coli EC4113 (EHEC) BAY-0005797 fldB CDS
Automated Process Uncurated Go view Escherichia coli EC4115 (EHEC) BAS-0009022 fldB CDS
Automated Process Uncurated Go view Escherichia coli EC4196 (EHEC) BAX-0008385 fldB CDS
Automated Process Uncurated Go view Escherichia coli EC4206 (EHEC) BAW-0006824 fldB CDS
Automated Process Uncurated Go view Escherichia coli EC4401 (EHEC) BAV-0005807 fldB CDS
Automated Process Uncurated Go view Escherichia coli EC4486 (EHEC) BAU-0006319 fldB CDS
Automated Process Uncurated Go view Escherichia coli EC4501 (EHEC) BAT-0005630 fldB CDS
Automated Process Uncurated Go view Escherichia coli EC508 (EHEC) BBJ-0007740 fldB CDS
Automated Process Uncurated Go view Escherichia coli EC869 (EHEC) BBC-0006059 fldB CDS
Automated Process Uncurated Go view Escherichia coli EDL933 (EHEC) ABH-0027905 fldB CDS
Automated Process Uncurated Go view Escherichia coli F11 (UPEC) ADQ-0008403 fldB CDS
Automated Process Uncurated Go view Escherichia coli HS ADR-0007733 fldB CDS
Person Uncurated Go view Escherichia coli K-12 MG1655 ABE-0009503 fldB CDS
Automated Process Uncurated Go view Escherichia coli K-12 W3110 ADY-0002966 fldB CDS
Automated Process Uncurated Go view Escherichia coli SE11 AFS-0003219 CDS
Automated Process Uncurated Go view Escherichia coli SMS-3-5 AFT-0003026 fldB CDS
Automated Process Uncurated Go view Escherichia coli Sakai (EHEC) ACA-0133809 fldB CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0001063 CDS
Automated Process Uncurated Go view Escherichia coli UTI89 (UPEC) AEA-0003289 fldB CDS
Automated Process Uncurated Go view Pectobacterium atrosepticum SCRI1043 ABL-0060998 fldB CDS
Automated Process Uncurated Go view Pectobacterium brasiliensis 1692 AED-0000412 fldB CDS
Automated Process Uncurated Go view Pectobacterium carotovorum WPP14 ADT-0000199 fldB CDS
Automated Process Uncurated Go view Pectobacterium parmentieri WPP163 AFJ-0001181 fldB CDS
Automated Process Uncurated Go view Salmonella Agona SL483 BBX-0007368 CDS
Automated Process Uncurated Go view Salmonella Arizonae CDC 346-86 BCD-0004834 CDS
Automated Process Uncurated Go view Salmonella Choleraesuis SC-B67 ADB-0003490 fldB CDS
Automated Process Uncurated Go view Salmonella Dublin CT_02021853 BCB-0007635 CDS
Automated Process Uncurated Go view Salmonella Enteritidis P125109 BCF-0009421 fldB CDS
Automated Process Uncurated Go view Salmonella Gallinarum 287/91 BCG-0008910 fldB CDS
Automated Process Uncurated Go view Salmonella Hadar RI_05P066 BBT-0006327 CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL476 BBV-0007635 CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL486 BBW-0006596 CDS
Automated Process Uncurated Go view Salmonella Javiana GA_MM04042433 BCA-0005596 CDS
Automated Process Uncurated Go view Salmonella Kentucky CDC 191 BBZ-0005639 CDS
Automated Process Uncurated Go view Salmonella Newport SL254 BBQ-0007637 fldB CDS
Automated Process Uncurated Go view Salmonella Newport SL317 BBR-0005428 CDS
Automated Process Uncurated Go view Salmonella Paratyphi A AKU_12601 BCH-0002942 CDS
Automated Process Uncurated Go view Salmonella Paratyphi A ATCC 9150 ADA-0002913 fldB CDS
Automated Process Uncurated Go view Salmonella Paratyphi B SPB7 BCC-0003807 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA23 BBN-0007797 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA29 BBM-0005422 CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund CVM19633 BBO-0007285 CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund SL480 BBY-0005493 CDS
Automated Process Uncurated Go view Salmonella Typhi CT18 ABX-0111847 fldB CDS
Automated Process Uncurated Go view Salmonella Typhi Ty2 ABS-0084681 fldB CDS
Automated Process Uncurated Go view Salmonella Typhimurium LT2 [T] ABU-0099487 fldB CDS
Automated Process Uncurated Go view Salmonella Virchow SL491 BBS-0006218 CDS
Automated Process Uncurated Go view Salmonella Weltevreden SL484 BBU-0009193 CDS
Automated Process Uncurated Go view Salmonella enterica CVM23701 BBL-0008187 CDS
Automated Process Uncurated Go view Shigella boydii 227 ADV-0003391 fldB CDS
Automated Process Uncurated Go view Shigella boydii BS512 ADJ-0008727 fldB CDS
Automated Process Uncurated Go view Shigella dysenteriae 1012 BAA-0003942 fldB CDS
Automated Process Uncurated Go view Shigella dysenteriae 197 ADU-0003631 fldB CDS
Automated Process Uncurated Go view Shigella flexneri 2457T ABQ-0074256 fldB CDS
Automated Process Uncurated Go view Shigella flexneri 301 ABT-0089133 fldB CDS
Automated Process Uncurated Go view Shigella flexneri 8401 BAG-0003140 fldB CDS
Automated Process Uncurated Go view Shigella sonnei 046 ADD-0003331 fldB CDS
Automated Process Uncurated Go view Yersinia bercovieri ATCC 43970 [T] AEK-0000885 CDS
Automated Process Uncurated Go view Yersinia enterocolitica 8081 BAH-0009789 fldB CDS
Automated Process Uncurated Go view Yersinia frederiksenii ATCC 33641 [T] AEI-0001730 isiB CDS
Automated Process Uncurated Go view Yersinia intermedia ATCC 29909 [T] AEH-0001240 fldB CDS
Automated Process Uncurated Go view Yersinia mollaretii ATCC 43969 [T] AEJ-0000580 CDS
Automated Process Uncurated Go view Yersinia pestis 91001 (biovar Microtus) ACQ-0242952 fldB CDS
Automated Process Uncurated Go view Yersinia pestis Angola (biovar Pestoides) ADI-0007970 fldB CDS
Automated Process Uncurated Go view Yersinia pestis Antiqua (biovar Antiqua) BAE-0000466 fldB CDS
Automated Process Uncurated Go view Yersinia pestis B42003004 (biovar Antiqua) BAL-0006755 fldB CDS
Automated Process Uncurated Go view Yersinia pestis CA88-4125 (biovar Orientalis) BAF-0002454 fldB CDS
Automated Process Uncurated Go view Yersinia pestis CO92 (biovar Orientalis) ABY-0118233 fldB CDS
Automated Process Uncurated Go view Yersinia pestis E1979001 (biovar Antiqua) BAM-0006677 fldB CDS
Automated Process Uncurated Go view Yersinia pestis F1991016 (biovar Orientalis) BAQ-0004950 fldB CDS
Automated Process Uncurated Go view Yersinia pestis FV-1 (biovar Orientalis) BAK-0003481 CDS
Automated Process Uncurated Go view Yersinia pestis IP275 (biovar Orientalis) BAC-0006538 fldB CDS
Automated Process Uncurated Go view Yersinia pestis K1973002 (biovar Mediaevalis) BAO-0006563 fldB CDS
Automated Process Uncurated Go view Yersinia pestis KIM (biovar Mediaevalis) ABI-0033044 fldB CDS
Automated Process Uncurated Go view Yersinia pestis MG05-1020 (biovar Orientalis) BAP-0004611 fldB CDS
Automated Process Uncurated Go view Yersinia pestis Nepal516 (biovar Antiqua) BAD-0003721 fldB CDS
Automated Process Uncurated Go view Yersinia pestis Pestoides F (biovar Pestoides) BAI-0000737 CDS
Automated Process Uncurated Go view Yersinia pestis UG05-0454 (biovar Antiqua) BAN-0006212 fldB CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP31758 ADS-0004823 fldB CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP32953 ACZ-0003275 fldB CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis PB1/+ AFV-0003939 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis YPIII AFW-0001034 CDS
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 3126747 to 3137268
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
AEC-0000001sourceforward14686137Contains
AEC-0002706lysSCDScomplement31255493127066Upstream
AEC-0002707prfBCDScomplement31270763128098(Interval #2) Upstream
AEC-0002707prfBCDScomplement31281003128174(Interval #1) Upstream
AEC-0002708recJCDScomplement31282653129998Upstream
AEC-0002709dsbCCDScomplement31300043130714Upstream
AEC-0002710xerDCDScomplement31307393131635Upstream
AEC-0002711fldBCDSforward31317473132268Matches
AEC-0002712ygfXCDScomplement31323083132715Downstream
AEC-0002713ygfYCDScomplement31326963132962Downstream
AEC-0002714ygfZCDSforward31332053134185Downstream
AEC-0002715yqfACDScomplement31343813135040Downstream
AEC-0002716yqfBCDScomplement31352043135515Downstream
AEC-0002717bglACDSforward31355543136993Downstream
AEC-0002718ygfFCDScomplement31370503137793Downstream
Release Notes to toptop
submitted to GenBank; assigned accession number CP000948