Escherichia coli K-12 DH10B
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Working With: Genome: Escherichia coli K-12 DH10B Version: 10

AEC-0002769 (mltC) - Escherichia coli K-12 DH10B - Feature Annotation

ASAP ID
AEC-0002769 showshow history
Names
mltC ECDH10B_3138
Product
membrane-bound lytic murein transglycosylase C
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome forward 3197524 3198603 1080 360
Sequence

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Context

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InterProScan
BLASTP
Protein Families to toptop
Author Approval Family Annotated
Automated Process Approved IPR000189 (IPR000189 Prokaryotic transglycosylase, active site) Jul 2009
Automated Process Approved IPR008258 (IPR008258 Transglycosylase SLT domain 1) Jul 2009
Protein Domains to toptop
Internal error getting result
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Approved name mltC Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0009725
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Person Approved locus tag ECDH10B_3138 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu
Reference: Escherichia coli K-12 DH10B 		Feb 2008
Product
Person Approved product membrane-bound lytic murein transglycosylase C Published Annotation - PubMed ID: 16397293
Reference: Escherichia coli K-12 		Mar 2007
Protein Family
Automated Process Approved protein family IPR000189 Prokaryotic transglycosylase, active site Protein Sequence Similarity - InterPro Domain: IPR000189
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR008258 Transglycosylase SLT domain 1 Protein Sequence Similarity - InterPro Domain: IPR008258
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Other
Person Approved comment 100% identical to E. coli K-12 MG1655 feature ABE-0009725 Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0009725
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0000716 mltC CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0000800 mltC CDS
Ortholog
Automated Process Uncurated Go view Dickeya dadantii 3937 ABF-0019693 mltC CDS
Automated Process Uncurated Go view Erwinia tasmaniensis Et1/99 [T] AFI-0002948 mltC CDS
Automated Process Uncurated Go view Escherichia albertii TW07627 AFX-0002584 mltC CDS
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0005871 mltC CDS
Automated Process Uncurated Go view Escherichia coli 536 (UPEC) AEF-0002987 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0008177 CDS
Automated Process Uncurated Go view Escherichia coli APEC O1 (APEC) AEG-0002959 mltC CDS
Automated Process Uncurated Go view Escherichia coli ATCC 8739 AEM-0006220 CDS
Automated Process Uncurated Go view Escherichia coli B171 (EPEC) ADN-0005665 mltC CDS
Automated Process Uncurated Go view Escherichia coli B7A (ETEC) ADK-0008277 CDS
Automated Process Uncurated Go view Escherichia coli CFT073 (UPEC) ABR-0079712 mltC CDS
Automated Process Uncurated Go view Escherichia coli E110019 (EPEC) ADM-0005706 mltC CDS
Automated Process Uncurated Go view Escherichia coli E22 (EPEC) ADL-0007283 mltC CDS
Automated Process Uncurated Go view Escherichia coli E2348/69 (EPEC) BCI-0003421 mltC CDS
Automated Process Uncurated Go view Escherichia coli E24377A (ETEC) ADO-0007745 mltC CDS
Automated Process Uncurated Go view Escherichia coli EC4024 (EHEC) BBI-0000224 CDS
Automated Process Uncurated Go view Escherichia coli EC4042 (EHEC) BBA-0007605 mltC CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0006123 mltC CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0008380 mltC CDS
Automated Process Uncurated Go view Escherichia coli EC4113 (EHEC) BAY-0005717 mltC CDS
Automated Process Uncurated Go view Escherichia coli EC4115 (EHEC) BAS-0009103 mltC CDS
Automated Process Uncurated Go view Escherichia coli EC4196 (EHEC) BAX-0006063 mltC CDS
Automated Process Uncurated Go view Escherichia coli EC4206 (EHEC) BAW-0006906 mltC CDS
Automated Process Uncurated Go view Escherichia coli EC4401 (EHEC) BAV-0005887 mltC CDS
Automated Process Uncurated Go view Escherichia coli EC4486 (EHEC) BAU-0006399 mltC CDS
Automated Process Uncurated Go view Escherichia coli EC4501 (EHEC) BAT-0005712 mltC CDS
Automated Process Uncurated Go view Escherichia coli EC508 (EHEC) BBJ-0005294 mltC CDS
Automated Process Uncurated Go view Escherichia coli EC869 (EHEC) BBC-0006139 mltC CDS
Automated Process Uncurated Go view Escherichia coli EDL933 (EHEC) ABH-0027982 mltC CDS
Automated Process Uncurated Go view Escherichia coli F11 (UPEC) ADQ-0006887 mltC CDS
Automated Process Uncurated Go view Escherichia coli HS ADR-0007805 mltC CDS
Person Uncurated Go view Escherichia coli K-12 MG1655 ABE-0009725 mltC CDS
Automated Process Uncurated Go view Escherichia coli K-12 W3110 ADY-0003034 mltC CDS
Automated Process Uncurated Go view Escherichia coli SE11 AFS-0003293 CDS
Automated Process Uncurated Go view Escherichia coli SMS-3-5 AFT-0003104 mltC CDS
Automated Process Uncurated Go view Escherichia coli Sakai (EHEC) ACA-0133882 mltC CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0001140 CDS
Automated Process Uncurated Go view Escherichia coli UTI89 (UPEC) AEA-0003363 mltC CDS
Automated Process Uncurated Go view Pectobacterium atrosepticum SCRI1043 ABL-0061211 mltC CDS
Automated Process Uncurated Go view Pectobacterium brasiliensis 1692 AED-0000523 mltC CDS
Automated Process Uncurated Go view Pectobacterium carotovorum WPP14 ADT-0001455 mltC CDS
Automated Process Uncurated Go view Pectobacterium parmentieri WPP163 AFJ-0000625 mltC CDS
Automated Process Uncurated Go view Salmonella Agona SL483 BBX-0007443 CDS
Automated Process Uncurated Go view Salmonella Arizonae CDC 346-86 BCD-0004758 CDS
Automated Process Uncurated Go view Salmonella Choleraesuis SC-B67 ADB-0003573 mltC CDS
Automated Process Uncurated Go view Salmonella Dublin CT_02021853 BCB-0007707 CDS
Automated Process Uncurated Go view Salmonella Enteritidis P125109 BCF-0009640 mltC CDS
Automated Process Uncurated Go view Salmonella Gallinarum 287/91 BCG-0009124 mltC CDS
Automated Process Uncurated Go view Salmonella Hadar RI_05P066 BBT-0008764 CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL476 BBV-0007711 CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL486 BBW-0006672 CDS
Automated Process Uncurated Go view Salmonella Javiana GA_MM04042433 BCA-0005669 CDS
Automated Process Uncurated Go view Salmonella Kentucky CDC 191 BBZ-0008577 CDS
Automated Process Uncurated Go view Salmonella Kentucky CVM29188 BBP-0006826 CDS
Automated Process Uncurated Go view Salmonella Newport SL254 BBQ-0007718 CDS
Automated Process Uncurated Go view Salmonella Newport SL317 BBR-0005353 CDS
Automated Process Uncurated Go view Salmonella Paratyphi A AKU_12601 BCH-0003003 CDS
Automated Process Uncurated Go view Salmonella Paratyphi A ATCC 9150 ADA-0002974 mltC CDS
Automated Process Uncurated Go view Salmonella Paratyphi B SPB7 BCC-0003894 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA23 BBN-0007872 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA29 BBM-0007197 CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund CVM19633 BBO-0007357 CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund SL480 BBY-0005566 CDS
Automated Process Uncurated Go view Salmonella Typhi CT18 ABX-0111982 mltC CDS
Automated Process Uncurated Go view Salmonella Typhi Ty2 ABS-0084744 mltC CDS
Automated Process Uncurated Go view Salmonella Typhimurium LT2 [T] ABU-0099691 mltC CDS
Automated Process Uncurated Go view Salmonella Virchow SL491 BBS-0006142 CDS
Automated Process Uncurated Go view Salmonella Weltevreden SL484 BBU-0006225 CDS
Automated Process Uncurated Go view Salmonella enterica CVM23701 BBL-0004765 CDS
Automated Process Uncurated Go view Shigella boydii 227 ADV-0003320 mltC CDS
Automated Process Uncurated Go view Shigella boydii BS512 ADJ-0008810 mltC CDS
Automated Process Uncurated Go view Shigella dysenteriae 1012 BAA-0003856 mltC CDS
Automated Process Uncurated Go view Shigella dysenteriae 197 ADU-0003548 mltC CDS
Automated Process Uncurated Go view Shigella flexneri 2457T ABQ-0074349 mltC CDS
Automated Process Uncurated Go view Shigella flexneri 301 ABT-0089209 mltC CDS
Automated Process Uncurated Go view Shigella flexneri 8401 BAG-0003221 mltC CDS
Automated Process Uncurated Go view Shigella sonnei 046 ADD-0003533 mltC CDS
Automated Process Uncurated Go view Yersinia bercovieri ATCC 43970 [T] AEK-0003382 CDS
Automated Process Uncurated Go view Yersinia enterocolitica 8081 BAH-0009966 mltC CDS
Automated Process Uncurated Go view Yersinia frederiksenii ATCC 33641 [T] AEI-0001669 mltC CDS
Automated Process Uncurated Go view Yersinia intermedia ATCC 29909 [T] AEH-0003681 mltC CDS
Automated Process Uncurated Go view Yersinia mollaretii ATCC 43969 [T] AEJ-0003792 CDS
Automated Process Uncurated Go view Yersinia pestis 91001 (biovar Microtus) ACQ-0242764 mltC CDS
Automated Process Uncurated Go view Yersinia pestis Angola (biovar Pestoides) ADI-0004257 CDS
Automated Process Uncurated Go view Yersinia pestis Antiqua (biovar Antiqua) BAE-0000388 CDS
Automated Process Uncurated Go view Yersinia pestis B42003004 (biovar Antiqua) BAL-0006691 CDS
Automated Process Uncurated Go view Yersinia pestis CA88-4125 (biovar Orientalis) BAF-0002398 mltC CDS
Automated Process Uncurated Go view Yersinia pestis CO92 (biovar Orientalis) ABY-0118404 mltC CDS
Automated Process Uncurated Go view Yersinia pestis E1979001 (biovar Antiqua) BAM-0006739 CDS
Automated Process Uncurated Go view Yersinia pestis F1991016 (biovar Orientalis) BAQ-0004887 CDS
Automated Process Uncurated Go view Yersinia pestis FV-1 (biovar Orientalis) BAK-0002065 CDS
Automated Process Uncurated Go view Yersinia pestis IP275 (biovar Orientalis) BAC-0006604 CDS
Automated Process Uncurated Go view Yersinia pestis K1973002 (biovar Mediaevalis) BAO-0008022 CDS
Automated Process Uncurated Go view Yersinia pestis KIM (biovar Mediaevalis) ABI-0033110 mltC CDS
Automated Process Uncurated Go view Yersinia pestis MG05-1020 (biovar Orientalis) BAP-0007848 CDS
Automated Process Uncurated Go view Yersinia pestis Nepal516 (biovar Antiqua) BAD-0003791 mltC CDS
Automated Process Uncurated Go view Yersinia pestis Pestoides F (biovar Pestoides) BAI-0000663 CDS
Automated Process Uncurated Go view Yersinia pestis UG05-0454 (biovar Antiqua) BAN-0006278 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP31758 ADS-0004761 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP32953 ACZ-0003334 mltC CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis PB1/+ AFV-0004009 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis YPIII AFW-0000961 CDS
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 3192524 to 3203603
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
AEC-0000001sourceforward14686137Contains
AEC-0002762yggMCDScomplement31916493192656Upstream
AEC-0002763ansBCDScomplement31927733193819Upstream
AEC-0002764yggNCDScomplement31939953194714Upstream
AEC-0002765yggLCDScomplement31948983195224Upstream
AEC-0002766trmICDScomplement31952243195943Upstream
AEC-0002767mutYCDSforward31961043197156Upstream
AEC-0002768yggXCDSforward31971843197459Upstream
AEC-0002769mltCCDSforward31975243198603Matches
AEC-0000044IS10R.1repeat_regionforward31994693200797Downstream
Release Notes to toptop
submitted to GenBank; assigned accession number CP000948