Escherichia coli K-12 DH10B
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Working With: Genome: Escherichia coli K-12 DH10B Version: 10

AEC-0002855 (folB) - Escherichia coli K-12 DH10B - Feature Annotation

ASAP ID
AEC-0002855 showshow history
Names
folB ECDH10B_3233
Product
bifunctional dihydroneopterin aldolase and dihydroneopterin triphosphate 2'-epimerase
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome complement 3299988 3300356 369 123
Sequence

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Context

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InterProScan
BLASTP
Protein Families to toptop
Author Approval Family Annotated
Automated Process Approved IPR006157 (IPR006157 Dihydroneopterin aldolase/epimerase domain) Jul 2009
Automated Process Approved IPR006156 (IPR006156 Dihydroneopterin aldolase) Jul 2009
Protein Domains to toptop
Internal error getting result
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Automated Process Approved GO biological process GO:0006760 folic acid-containing compound metabolic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR006157
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0004150 dihydroneopterin aldolase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR006157
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Approved name folB Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0010036
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Person Approved locus tag ECDH10B_3233 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu
Reference: Escherichia coli K-12 DH10B 		Feb 2008
Product
Person Approved product bifunctional dihydroneopterin aldolase and dihydroneopterin triphosphate 2'-epimerase Published Annotation - PubMed ID: 16397293
Reference: Escherichia coli K-12 		Mar 2007
Protein Family
Automated Process Approved protein family IPR006157 Dihydroneopterin aldolase/epimerase domain Protein Sequence Similarity - InterPro Domain: IPR006157
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR006156 Dihydroneopterin aldolase Protein Sequence Similarity - InterPro Domain: IPR006156
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Other
Person Approved comment 100% identical to E. coli K-12 MG1655 feature ABE-0010036 Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0010036
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Gene Ontology
Automated Process Approved GO biological process GO:0006760 folic acid-containing compound metabolic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR006157
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0004150 dihydroneopterin aldolase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR006157
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0000513 folB CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0000650 folB CDS
Ortholog
Automated Process Uncurated Go view Dickeya dadantii 3937 ABF-0014827 folB CDS
Automated Process Uncurated Go view Erwinia tasmaniensis Et1/99 [T] AFI-0000456 CDS
Automated Process Uncurated Go view Escherichia albertii TW07627 AFX-0002440 folB CDS
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0005699 folB CDS
Automated Process Uncurated Go view Escherichia coli 536 (UPEC) AEF-0003178 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0008058 folB CDS
Automated Process Uncurated Go view Escherichia coli APEC O1 (APEC) AEG-0003142 folB CDS
Automated Process Uncurated Go view Escherichia coli ATCC 8739 AEM-0006084 CDS
Automated Process Uncurated Go view Escherichia coli B171 (EPEC) ADN-0005511 folB CDS
Automated Process Uncurated Go view Escherichia coli B7A (ETEC) ADK-0009264 CDS
Automated Process Uncurated Go view Escherichia coli CFT073 (UPEC) ABR-0079979 folB CDS
Automated Process Uncurated Go view Escherichia coli E110019 (EPEC) ADM-0005598 folB CDS
Automated Process Uncurated Go view Escherichia coli E22 (EPEC) ADL-0005596 folB CDS
Automated Process Uncurated Go view Escherichia coli E2348/69 (EPEC) BCI-0003571 folB CDS
Automated Process Uncurated Go view Escherichia coli E24377A (ETEC) ADO-0007955 folB CDS
Automated Process Uncurated Go view Escherichia coli EC4024 (EHEC) BBI-0000329 CDS
Automated Process Uncurated Go view Escherichia coli EC4042 (EHEC) BBA-0007710 folB CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0006227 folB CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0008485 folB CDS
Automated Process Uncurated Go view Escherichia coli EC4113 (EHEC) BAY-0010782 folB CDS
Automated Process Uncurated Go view Escherichia coli EC4115 (EHEC) BAS-0009206 folB CDS
Automated Process Uncurated Go view Escherichia coli EC4196 (EHEC) BAX-0005959 folB CDS
Automated Process Uncurated Go view Escherichia coli EC4206 (EHEC) BAW-0007011 folB CDS
Automated Process Uncurated Go view Escherichia coli EC4401 (EHEC) BAV-0005991 folB CDS
Automated Process Uncurated Go view Escherichia coli EC4486 (EHEC) BAU-0006506 folB CDS
Automated Process Uncurated Go view Escherichia coli EC4501 (EHEC) BAT-0005813 folB CDS
Automated Process Uncurated Go view Escherichia coli EC508 (EHEC) BBJ-0005397 folB CDS
Automated Process Uncurated Go view Escherichia coli EC869 (EHEC) BBC-0006242 folB CDS
Automated Process Uncurated Go view Escherichia coli EDL933 (EHEC) ABH-0028085 folB CDS
Automated Process Uncurated Go view Escherichia coli F11 (UPEC) ADQ-0007564 folB CDS
Automated Process Uncurated Go view Escherichia coli HS ADR-0007919 folB CDS
Person Uncurated Go view Escherichia coli K-12 MG1655 ABE-0010036 folB CDS
Automated Process Uncurated Go view Escherichia coli K-12 W3110 ADY-0003127 folB CDS
Automated Process Uncurated Go view Escherichia coli SE11 AFS-0003400 CDS
Automated Process Uncurated Go view Escherichia coli SMS-3-5 AFT-0003349 folB CDS
Automated Process Uncurated Go view Escherichia coli Sakai (EHEC) ACA-0133998 folB CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0005899 CDS
Automated Process Uncurated Go view Escherichia coli UTI89 (UPEC) AEA-0003503 ygiG CDS
Automated Process Uncurated Go view Pectobacterium atrosepticum SCRI1043 ABL-0063904 folB CDS
Automated Process Uncurated Go view Pectobacterium brasiliensis 1692 AED-0002058 folB CDS
Automated Process Uncurated Go view Pectobacterium carotovorum WPP14 ADT-0002103 folB CDS
Automated Process Uncurated Go view Pectobacterium parmentieri WPP163 AFJ-0004028 folB CDS
Automated Process Uncurated Go view Salmonella Agona SL483 BBX-0007559 folB CDS
Automated Process Uncurated Go view Salmonella Arizonae CDC 346-86 BCD-0004642 CDS
Automated Process Uncurated Go view Salmonella Choleraesuis SC-B67 ADB-0003683 folB CDS
Automated Process Uncurated Go view Salmonella Dublin CT_02021853 BCB-0007813 folB CDS
Automated Process Uncurated Go view Salmonella Enteritidis P125109 BCF-0009940 folB CDS
Automated Process Uncurated Go view Salmonella Gallinarum 287/91 BCG-0009405 folB CDS
Automated Process Uncurated Go view Salmonella Hadar RI_05P066 BBT-0007294 folB CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL476 BBV-0007819 folB CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL486 BBW-0006778 folB CDS
Automated Process Uncurated Go view Salmonella Javiana GA_MM04042433 BCA-0005778 folB CDS
Automated Process Uncurated Go view Salmonella Kentucky CDC 191 BBZ-0006241 folB CDS
Automated Process Uncurated Go view Salmonella Kentucky CVM29188 BBP-0006949 folB CDS
Automated Process Uncurated Go view Salmonella Newport SL254 BBQ-0007824 folB CDS
Automated Process Uncurated Go view Salmonella Newport SL317 BBR-0005248 folB CDS
Automated Process Uncurated Go view Salmonella Paratyphi A AKU_12601 BCH-0003106 CDS
Automated Process Uncurated Go view Salmonella Paratyphi A ATCC 9150 ADA-0003073 folB CDS
Automated Process Uncurated Go view Salmonella Paratyphi B SPB7 BCC-0004017 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA23 BBN-0007978 folB CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA29 BBM-0007093 folB CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund CVM19633 BBO-0007467 folB CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund SL480 BBY-0007388 folB CDS
Automated Process Uncurated Go view Salmonella Typhi CT18 ABX-0112161 folB CDS
Automated Process Uncurated Go view Salmonella Typhi Ty2 ABS-0084845 folB CDS
Automated Process Uncurated Go view Salmonella Typhimurium LT2 [T] ABU-0099967 folB CDS
Automated Process Uncurated Go view Salmonella Virchow SL491 BBS-0006023 folB CDS
Automated Process Uncurated Go view Salmonella Weltevreden SL484 BBU-0006104 folB CDS
Automated Process Uncurated Go view Salmonella enterica CVM23701 BBL-0004660 folB CDS
Automated Process Uncurated Go view Shigella boydii 227 ADV-0003200 ygiG CDS
Automated Process Uncurated Go view Shigella boydii BS512 ADJ-0008906 folB CDS
Automated Process Uncurated Go view Shigella dysenteriae 1012 BAA-0004048 folB CDS
Automated Process Uncurated Go view Shigella dysenteriae 197 ADU-0003693 ygiG CDS
Automated Process Uncurated Go view Shigella flexneri 2457T ABQ-0074491 folB CDS
Automated Process Uncurated Go view Shigella flexneri 301 ABT-0089344 ygiG CDS
Automated Process Uncurated Go view Shigella flexneri 8401 BAG-0003301 ygiG CDS
Automated Process Uncurated Go view Shigella sonnei 046 ADD-0003488 folB CDS
Automated Process Uncurated Go view Yersinia bercovieri ATCC 43970 [T] AEK-0000270 CDS
Automated Process Uncurated Go view Yersinia enterocolitica 8081 BAH-0010557 folB CDS
Automated Process Uncurated Go view Yersinia frederiksenii ATCC 33641 [T] AEI-0001969 folB CDS
Automated Process Uncurated Go view Yersinia intermedia ATCC 29909 [T] AEH-0002309 folB CDS
Automated Process Uncurated Go view Yersinia mollaretii ATCC 43969 [T] AEJ-0001455 CDS
Automated Process Uncurated Go view Yersinia pestis 91001 (biovar Microtus) ACQ-0241426 folB CDS
Automated Process Uncurated Go view Yersinia pestis Angola (biovar Pestoides) ADI-0004403 folB CDS
Automated Process Uncurated Go view Yersinia pestis Antiqua (biovar Antiqua) BAE-0003763 folB CDS
Automated Process Uncurated Go view Yersinia pestis B42003004 (biovar Antiqua) BAL-0006068 folB CDS
Automated Process Uncurated Go view Yersinia pestis CA88-4125 (biovar Orientalis) BAF-0002676 folB CDS
Automated Process Uncurated Go view Yersinia pestis CO92 (biovar Orientalis) ABY-0117481 folB CDS
Automated Process Uncurated Go view Yersinia pestis E1979001 (biovar Antiqua) BAM-0005055 folB CDS
Automated Process Uncurated Go view Yersinia pestis F1991016 (biovar Orientalis) BAQ-0005195 folB CDS
Automated Process Uncurated Go view Yersinia pestis FV-1 (biovar Orientalis) BAK-0003234 CDS
Automated Process Uncurated Go view Yersinia pestis IP275 (biovar Orientalis) BAC-0009326 folB CDS
Automated Process Uncurated Go view Yersinia pestis K1973002 (biovar Mediaevalis) BAO-0006366 folB CDS
Automated Process Uncurated Go view Yersinia pestis KIM (biovar Mediaevalis) ABI-0033305 folB CDS
Automated Process Uncurated Go view Yersinia pestis MG05-1020 (biovar Orientalis) BAP-0004363 folB CDS
Automated Process Uncurated Go view Yersinia pestis Nepal516 (biovar Antiqua) BAD-0000628 folB CDS
Automated Process Uncurated Go view Yersinia pestis Pestoides F (biovar Pestoides) BAI-0000505 CDS
Automated Process Uncurated Go view Yersinia pestis UG05-0454 (biovar Antiqua) BAN-0004640 folB CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP31758 ADS-0004500 folB CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP32953 ACZ-0003523 folB CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis PB1/+ AFV-0004246 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis YPIII AFW-0000746 CDS
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 3294988 to 3305356
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
AEC-0000001sourceforward14686137Contains
AEC-0002850glnECDScomplement32925683295408Downstream
AEC-0002851ygiFCDScomplement32954313296732Downstream
AEC-0002852htrGCDSforward32969743297594Downstream
AEC-0002853ccaCDSforward32976583298896Downstream
AEC-0002854bacACDScomplement32990773299898Downstream
AEC-0002855folBCDScomplement32999883300356Matches
AEC-0002856ygiHCDSforward33004613301078Upstream
AEC-0002857ygiPCDScomplement33010913302023Upstream
AEC-0002858ttdACDSforward33022303303141Upstream
AEC-0002859ttdBCDSforward33031383303743Upstream
AEC-0002860ygjECDSforward33037913305254Upstream
AEC-0002861ygjDCDScomplement33052973306310Upstream
Release Notes to toptop
submitted to GenBank; assigned accession number CP000948