Escherichia coli K-12 DH10B
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Working With: Genome: Escherichia coli K-12 DH10B Version: 10

AEC-0002922 (kbaZ) - Escherichia coli K-12 DH10B - Feature Annotation

ASAP ID
AEC-0002922 showshow history
Names
kbaZ ECDH10B_3305
Product
tagatose 6-phosphate aldolase 1, kbaZ subunit
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome forward 3374681 3375961 1281 427
Sequence

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Context

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InterProScan
BLASTP
Protein Families to toptop
Author Approval Family Annotated
Automated Process Approved IPR012062 (IPR012062 D-tagatose-1,6-bisphosphate aldolase subunit GatZ/KbaZ-like) Jul 2009
Protein Domains to toptop
Internal error getting result
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Automated Process Approved GO biological process GO:0019402 galactitol metabolic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR012062
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0009024 tagatose-6-phosphate kinase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR012062
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Approved name kbaZ Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0010295
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Person Approved locus tag ECDH10B_3305 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu
Reference: Escherichia coli K-12 DH10B 		Feb 2008
Product
Person Approved product tagatose 6-phosphate aldolase 1, kbaZ subunit Published Annotation - PubMed ID: 16397293
Reference: Escherichia coli K-12 		Mar 2007
Protein Family
Automated Process Approved protein family IPR012062 D-tagatose-1,6-bisphosphate aldolase subunit GatZ/KbaZ-like Protein Sequence Similarity - InterPro Domain: IPR012062
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Other
Person Approved comment 100% identical to E. coli K-12 MG1655 feature ABE-0010295 Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0010295
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Gene Ontology
Automated Process Approved GO biological process GO:0019402 galactitol metabolic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR012062
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0009024 tagatose-6-phosphate kinase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR012062
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0000098 kbaZ CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0001744 kbaZ CDS
Ortholog
Automated Process Uncurated Go view Escherichia albertii TW07627 AFX-0002306 CDS
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0008065 CDS
Automated Process Uncurated Go view Escherichia coli 536 (UPEC) AEF-0003252 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0007975 CDS
Automated Process Uncurated Go view Escherichia coli APEC O1 (APEC) AEG-0003201 agaZ CDS
Automated Process Uncurated Go view Escherichia coli ATCC 8739 AEM-0005998 CDS
Automated Process Uncurated Go view Escherichia coli B171 (EPEC) ADN-0007293 CDS
Automated Process Uncurated Go view Escherichia coli B7A (ETEC) ADK-0009719 CDS
Automated Process Uncurated Go view Escherichia coli CFT073 (UPEC) ABR-0080059 kbaZ CDS
Automated Process Uncurated Go view Escherichia coli E110019 (EPEC) ADM-0005494 CDS
Automated Process Uncurated Go view Escherichia coli E22 (EPEC) ADL-0005678 CDS
Automated Process Uncurated Go view Escherichia coli E2348/69 (EPEC) BCI-0003640 kbaZ CDS
Automated Process Uncurated Go view Escherichia coli E24377A (ETEC) ADO-0008044 CDS
Automated Process Uncurated Go view Escherichia coli EC4024 (EHEC) BBI-0002808 CDS
Automated Process Uncurated Go view Escherichia coli EC4042 (EHEC) BBA-0007786 CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0006302 CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0007833 CDS
Automated Process Uncurated Go view Escherichia coli EC4113 (EHEC) BAY-0007397 CDS
Automated Process Uncurated Go view Escherichia coli EC4115 (EHEC) BAS-0009282 CDS
Automated Process Uncurated Go view Escherichia coli EC4196 (EHEC) BAX-0005882 CDS
Automated Process Uncurated Go view Escherichia coli EC4206 (EHEC) BAW-0007087 CDS
Automated Process Uncurated Go view Escherichia coli EC4401 (EHEC) BAV-0006068 CDS
Automated Process Uncurated Go view Escherichia coli EC4486 (EHEC) BAU-0008972 CDS
Automated Process Uncurated Go view Escherichia coli EC4501 (EHEC) BAT-0007665 CDS
Automated Process Uncurated Go view Escherichia coli EC508 (EHEC) BBJ-0005474 CDS
Automated Process Uncurated Go view Escherichia coli EC869 (EHEC) BBC-0006319 CDS
Automated Process Uncurated Go view Escherichia coli EDL933 (EHEC) ABH-0028157 kbaZ CDS
Automated Process Uncurated Go view Escherichia coli F11 (UPEC) ADQ-0007260 kbaZ CDS
Automated Process Uncurated Go view Escherichia coli HS ADR-0008007 CDS
Person Uncurated Go view Escherichia coli K-12 MG1655 ABE-0010295 kbaZ CDS
Automated Process Uncurated Go view Escherichia coli K-12 W3110 ADY-0003200 kbaZ CDS
Automated Process Uncurated Go view Escherichia coli SE11 AFS-0003479 CDS
Automated Process Uncurated Go view Escherichia coli SMS-3-5 AFT-0003427 CDS
Automated Process Uncurated Go view Escherichia coli Sakai (EHEC) ACA-0134069 kbaZ CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0005976 CDS
Automated Process Uncurated Go view Escherichia coli UTI89 (UPEC) AEA-0003570 agaZ CDS
Automated Process Uncurated Go view Pectobacterium parmentieri WPP163 AFJ-0003387 CDS
Automated Process Uncurated Go view Salmonella Arizonae CDC 346-86 BCD-0004577 CDS
Automated Process Uncurated Go view Shigella dysenteriae 1012 BAA-0006405 CDS
Automated Process Uncurated Go view Shigella flexneri 2457T ABQ-0074577 agaZ CDS
Automated Process Uncurated Go view Shigella flexneri 301 ABT-0089407 agaZ CDS
Automated Process Uncurated Go view Yersinia frederiksenii ATCC 33641 [T] AEI-0003815 kbaZ CDS
Automated Process Uncurated Go view Yersinia intermedia ATCC 29909 [T] AEH-0003737 kbaZ CDS
Automated Process Uncurated Go view Yersinia pestis 91001 (biovar Microtus) ACQ-0242835 agaZ CDS
Automated Process Uncurated Go view Yersinia pestis Angola (biovar Pestoides) ADI-0007498 agaZ CDS
Automated Process Uncurated Go view Yersinia pestis Antiqua (biovar Antiqua) BAE-0000540 agaZ CDS
Automated Process Uncurated Go view Yersinia pestis B42003004 (biovar Antiqua) BAL-0006823 agaZ CDS
Automated Process Uncurated Go view Yersinia pestis CA88-4125 (biovar Orientalis) BAF-0002510 agaZ CDS
Automated Process Uncurated Go view Yersinia pestis CO92 (biovar Orientalis) ABY-0118066 agaZ CDS
Automated Process Uncurated Go view Yersinia pestis E1979001 (biovar Antiqua) BAM-0006613 agaZ CDS
Automated Process Uncurated Go view Yersinia pestis F1991016 (biovar Orientalis) BAQ-0005016 agaZ CDS
Automated Process Uncurated Go view Yersinia pestis FV-1 (biovar Orientalis) BAK-0004189 CDS
Automated Process Uncurated Go view Yersinia pestis IP275 (biovar Orientalis) BAC-0006475 agaZ CDS
Automated Process Uncurated Go view Yersinia pestis K1973002 (biovar Mediaevalis) BAO-0006498 agaZ CDS
Automated Process Uncurated Go view Yersinia pestis KIM (biovar Mediaevalis) ABI-0032983 agaZ CDS
Automated Process Uncurated Go view Yersinia pestis MG05-1020 (biovar Orientalis) BAP-0004545 agaZ CDS
Automated Process Uncurated Go view Yersinia pestis Nepal516 (biovar Antiqua) BAD-0003651 agaZ CDS
Automated Process Uncurated Go view Yersinia pestis Pestoides F (biovar Pestoides) BAI-0000808 CDS
Automated Process Uncurated Go view Yersinia pestis UG05-0454 (biovar Antiqua) BAN-0006146 agaZ CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP31758 ADS-0004888 agaZ CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP32953 ACZ-0003182 agaZ CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis PB1/+ AFV-0003824 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis YPIII AFW-0001159 CDS
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 3369681 to 3380961
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
AEC-0000001sourceforward14686137Contains
AEC-0002917garPCDScomplement33693403370674Upstream
AEC-0002918garDCDSforward33710493372620Upstream
AEC-0002919sohACDSforward33727693373104Upstream
AEC-0002920yhaVCDSforward33731043373568Upstream
AEC-0002921agaRCDScomplement33736233374432Upstream
AEC-0002922kbaZCDSforward33746813375961Matches
AEC-0002923agaVCDSforward33759843376457Downstream
AEC-0004536agaW_1CDSpforward33764683376869Downstream
AEC-0002924agaWpseudogeneforward33764683376843Downstream
AEC-0002925agaApseudogeneforward33768383377392Downstream
AEC-0002926agaSCDSforward33777433378897Downstream
AEC-0002927kbaYCDSforward33789103379770Downstream
AEC-0002928agaBCDSforward33799373380413Downstream
AEC-0002929agaCCDSforward33804523381255Downstream
Release Notes to toptop
submitted to GenBank; assigned accession number CP000948