Escherichia coli K-12 DH10B
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Working With: Genome: Escherichia coli K-12 DH10B Version: 10

AEC-0002961 (argG) - Escherichia coli K-12 DH10B - Feature Annotation

ASAP ID
AEC-0002961 showshow history
Names
argG ECDH10B_3346
Product
argininosuccinate synthetase
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome forward 3414404 3415747 1344 448
Sequence

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Context

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Pre-Run Search Results
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InterProScan
BLASTP
Protein Families to toptop
Author Approval Family Annotated
Automated Process Approved IPR001518 (IPR001518 Argininosuccinate synthase) Jul 2009
Automated Process Approved IPR014729 (IPR014729 Rossmann-like alpha/beta/alpha sandwich fold) Jul 2009
Protein Domains to toptop
Internal error getting result
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Automated Process Approved GO biological process GO:0006526 arginine biosynthetic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001518
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0005524 ATP binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001518
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0004055 argininosuccinate synthase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001518
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Approved name argG Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0010428
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Person Approved locus tag ECDH10B_3346 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu
Reference: Escherichia coli K-12 DH10B 		Feb 2008
Product
Person Approved product argininosuccinate synthetase Published Annotation - PubMed ID: 16397293
Reference: Escherichia coli K-12 		Mar 2007
Protein Family
Automated Process Approved protein family IPR001518 Argininosuccinate synthase Protein Sequence Similarity - InterPro Domain: IPR001518
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Protein Sequence Similarity - InterPro Domain: IPR014729
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Other
Person Approved comment 100% identical to E. coli K-12 MG1655 feature ABE-0010428 Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0010428
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Gene Ontology
Automated Process Approved GO biological process GO:0006526 arginine biosynthetic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001518
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0004055 argininosuccinate synthase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001518
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0005524 ATP binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001518
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0000423 argG CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0000612 argG CDS
Ortholog
Automated Process Uncurated Go view Dickeya dadantii 3937 ABF-0016090 argG CDS
Automated Process Uncurated Go view Escherichia albertii TW07627 AFX-0002264 argG CDS
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0008109 argG CDS
Automated Process Uncurated Go view Escherichia coli 536 (UPEC) AEF-0003290 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0007927 argG CDS
Automated Process Uncurated Go view Escherichia coli APEC O1 (APEC) AEG-0003240 argG CDS
Automated Process Uncurated Go view Escherichia coli ATCC 8739 AEM-0005949 CDS
Automated Process Uncurated Go view Escherichia coli B171 (EPEC) ADN-0010094 argG CDS
Automated Process Uncurated Go view Escherichia coli B7A (ETEC) ADK-0008385 CDS
Automated Process Uncurated Go view Escherichia coli CFT073 (UPEC) ABR-0080102 argG CDS
Automated Process Uncurated Go view Escherichia coli E110019 (EPEC) ADM-0005465 argG CDS
Automated Process Uncurated Go view Escherichia coli E22 (EPEC) ADL-0005722 argG CDS
Automated Process Uncurated Go view Escherichia coli E2348/69 (EPEC) BCI-0003679 argG CDS
Automated Process Uncurated Go view Escherichia coli E24377A (ETEC) ADO-0008089 argG CDS
Automated Process Uncurated Go view Escherichia coli EC4024 (EHEC) BBI-0002853 CDS
Automated Process Uncurated Go view Escherichia coli EC4042 (EHEC) BBA-0007834 argG CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0006349 argG CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0007881 argG CDS
Automated Process Uncurated Go view Escherichia coli EC4113 (EHEC) BAY-0007349 argG CDS
Automated Process Uncurated Go view Escherichia coli EC4115 (EHEC) BAS-0009330 argG CDS
Automated Process Uncurated Go view Escherichia coli EC4196 (EHEC) BAX-0005834 argG CDS
Automated Process Uncurated Go view Escherichia coli EC4206 (EHEC) BAW-0007137 argG CDS
Automated Process Uncurated Go view Escherichia coli EC4401 (EHEC) BAV-0006118 argG CDS
Automated Process Uncurated Go view Escherichia coli EC4486 (EHEC) BAU-0009022 argG CDS
Automated Process Uncurated Go view Escherichia coli EC508 (EHEC) BBJ-0005524 argG CDS
Automated Process Uncurated Go view Escherichia coli EC869 (EHEC) BBC-0006368 argG CDS
Automated Process Uncurated Go view Escherichia coli EDL933 (EHEC) ABH-0028205 argG CDS
Automated Process Uncurated Go view Escherichia coli F11 (UPEC) ADQ-0007218 argG CDS
Automated Process Uncurated Go view Escherichia coli HS ADR-0008051 argG CDS
Person Uncurated Go view Escherichia coli K-12 MG1655 ABE-0010428 argG CDS
Automated Process Uncurated Go view Escherichia coli K-12 W3110 ADY-0003241 argG CDS
Automated Process Uncurated Go view Escherichia coli SE11 AFS-0003521 CDS
Automated Process Uncurated Go view Escherichia coli SMS-3-5 AFT-0003466 argG CDS
Automated Process Uncurated Go view Escherichia coli Sakai (EHEC) ACA-0134115 argG CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0006023 CDS
Automated Process Uncurated Go view Escherichia coli UTI89 (UPEC) AEA-0003613 argG CDS
Automated Process Uncurated Go view Pectobacterium atrosepticum SCRI1043 ABL-0060305 argG CDS
Automated Process Uncurated Go view Pectobacterium brasiliensis 1692 AED-0000074 argG CDS
Automated Process Uncurated Go view Pectobacterium carotovorum WPP14 ADT-0001240 argG CDS
Automated Process Uncurated Go view Pectobacterium parmentieri WPP163 AFJ-0000213 argG CDS
Automated Process Uncurated Go view Salmonella Agona SL483 BBX-0007646 argG CDS
Automated Process Uncurated Go view Salmonella Arizonae CDC 346-86 BCD-0004542 CDS
Automated Process Uncurated Go view Salmonella Choleraesuis SC-B67 ADB-0003774 argG CDS
Automated Process Uncurated Go view Salmonella Dublin CT_02021853 BCB-0007898 argG CDS
Automated Process Uncurated Go view Salmonella Enteritidis P125109 BCF-0010188 argG CDS
Automated Process Uncurated Go view Salmonella Gallinarum 287/91 BCG-0009641 argG CDS
Automated Process Uncurated Go view Salmonella Hadar RI_05P066 BBT-0007165 argG CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL476 BBV-0007944 argG CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL486 BBW-0006863 argG CDS
Automated Process Uncurated Go view Salmonella Javiana GA_MM04042433 BCA-0005863 argG CDS
Automated Process Uncurated Go view Salmonella Kentucky CDC 191 BBZ-0006328 argG CDS
Automated Process Uncurated Go view Salmonella Kentucky CVM29188 BBP-0007040 argG CDS
Automated Process Uncurated Go view Salmonella Newport SL254 BBQ-0007906 argG CDS
Automated Process Uncurated Go view Salmonella Newport SL317 BBR-0005159 argG CDS
Automated Process Uncurated Go view Salmonella Paratyphi A AKU_12601 BCH-0003191 CDS
Automated Process Uncurated Go view Salmonella Paratyphi A ATCC 9150 ADA-0003157 argG CDS
Automated Process Uncurated Go view Salmonella Paratyphi B SPB7 BCC-0004119 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA23 BBN-0008067 argG CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA29 BBM-0007263 argG CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund CVM19633 BBO-0007551 argG CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund SL480 BBY-0007222 argG CDS
Automated Process Uncurated Go view Salmonella Typhi CT18 ABX-0112329 argG CDS
Automated Process Uncurated Go view Salmonella Typhi Ty2 ABS-0084928 argG CDS
Automated Process Uncurated Go view Salmonella Typhimurium LT2 [T] ABU-0100220 argG CDS
Automated Process Uncurated Go view Salmonella Virchow SL491 BBS-0005941 argG CDS
Automated Process Uncurated Go view Salmonella Weltevreden SL484 BBU-0006021 argG CDS
Automated Process Uncurated Go view Salmonella enterica CVM23701 BBL-0004572 argG CDS
Automated Process Uncurated Go view Shigella boydii 227 ADV-0003509 argG CDS
Automated Process Uncurated Go view Shigella boydii BS512 ADJ-0009016 argG CDS
Automated Process Uncurated Go view Shigella dysenteriae 1012 BAA-0006453 argG CDS
Automated Process Uncurated Go view Shigella dysenteriae 197 ADU-0003815 argG CDS
Automated Process Uncurated Go view Shigella flexneri 2457T ABQ-0074628 argG CDS
Automated Process Uncurated Go view Shigella flexneri 301 ABT-0089452 argG CDS
Automated Process Uncurated Go view Shigella flexneri 8401 BAG-0003409 argG CDS
Automated Process Uncurated Go view Shigella sonnei 046 ADD-0003628 argG CDS
Automated Process Uncurated Go view Yersinia bercovieri ATCC 43970 [T] AEK-0000512 CDS
Automated Process Uncurated Go view Yersinia enterocolitica 8081 BAH-0007716 argG CDS
Automated Process Uncurated Go view Yersinia frederiksenii ATCC 33641 [T] AEI-0000440 argG CDS
Automated Process Uncurated Go view Yersinia intermedia ATCC 29909 [T] AEH-0002674 argG CDS
Automated Process Uncurated Go view Yersinia mollaretii ATCC 43969 [T] AEJ-0001254 CDS
Automated Process Uncurated Go view Yersinia pestis 91001 (biovar Microtus) ACQ-0237742 argG CDS
Automated Process Uncurated Go view Yersinia pestis Angola (biovar Pestoides) ADI-0005809 argG CDS
Automated Process Uncurated Go view Yersinia pestis Antiqua (biovar Antiqua) BAE-0001052 CDS
Automated Process Uncurated Go view Yersinia pestis B42003004 (biovar Antiqua) BAL-0005704 argG CDS
Automated Process Uncurated Go view Yersinia pestis CA88-4125 (biovar Orientalis) BAF-0001852 argG CDS
Automated Process Uncurated Go view Yersinia pestis CO92 (biovar Orientalis) ABY-0120511 argG CDS
Automated Process Uncurated Go view Yersinia pestis E1979001 (biovar Antiqua) BAM-0005709 argG CDS
Automated Process Uncurated Go view Yersinia pestis F1991016 (biovar Orientalis) BAQ-0005775 argG CDS
Automated Process Uncurated Go view Yersinia pestis IP275 (biovar Orientalis) BAC-0009001 argG CDS
Automated Process Uncurated Go view Yersinia pestis K1973002 (biovar Mediaevalis) BAO-0004873 argG CDS
Automated Process Uncurated Go view Yersinia pestis KIM (biovar Mediaevalis) ABI-0032326 argG CDS
Automated Process Uncurated Go view Yersinia pestis MG05-1020 (biovar Orientalis) BAP-0007729 argG CDS
Automated Process Uncurated Go view Yersinia pestis Nepal516 (biovar Antiqua) BAD-0002898 argG CDS
Automated Process Uncurated Go view Yersinia pestis Pestoides F (biovar Pestoides) BAI-0001683 CDS
Automated Process Uncurated Go view Yersinia pestis UG05-0454 (biovar Antiqua) BAN-0006544 argG CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP31758 ADS-0006390 argG CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP32953 ACZ-0001651 argG CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis PB1/+ AFV-0002008 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis YPIII AFW-0002971 CDS
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 3409404 to 3420747
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
AEC-0000001sourceforward14686137Contains
AEC-0002958infBCDScomplement34091093411781Upstream
AEC-0002959nusACDScomplement34118063413293Upstream
AEC-0002960yhbCCDScomplement34133213413773Upstream
AEC-0004166metYtRNAcomplement34139803414056Upstream
AEC-0002961argGCDSforward34144043415747Matches
AEC-0002962yhbXCDScomplement34157553417380Downstream
AEC-0004167leuUtRNAcomplement34178393417925Downstream
AEC-0002963secGCDScomplement34179403418272Downstream
AEC-0002964glmMCDScomplement34185003419837Downstream
AEC-0002965folPCDScomplement34198303420678Downstream
Release Notes to toptop
submitted to GenBank; assigned accession number CP000948