Escherichia coli K-12 DH10B
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Working With: Genome: Escherichia coli K-12 DH10B Version: 10

AEC-0002964 (glmM) - Escherichia coli K-12 DH10B - Feature Annotation

ASAP ID
AEC-0002964 showshow history
Names
glmM ECDH10B_3350
Product
phosphoglucosamine mutase
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome complement 3418500 3419837 1338 446
Sequence

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Context

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Pre-Run Search Results
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InterProScan
BLASTP
Protein Families to toptop
Author Approval Family Annotated
Automated Process Approved IPR005841 (IPR005841 Alpha-D-phosphohexomutase superfamily) Jul 2009
Automated Process Approved IPR005844 (IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I) Jul 2009
Automated Process Approved IPR005845 (IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II) Jul 2009
Automated Process Approved IPR005846 (IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III) Jul 2009
Automated Process Approved IPR005843 (IPR005843 Alpha-D-phosphohexomutase, C-terminal) Jul 2009
Automated Process Approved IPR006352 (IPR006352 Phosphoglucosamine mutase, bacterial type) Jul 2009
Automated Process Approved IPR016055 (IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III) Jul 2009
Automated Process Approved IPR016066 (IPR016066 Alpha-D-phosphohexomutase, conserved site) Jul 2009
Protein Domains to toptop
Internal error getting result
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Automated Process Approved GO biological process GO:0005975 carbohydrate metabolic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR005841
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0008966 phosphoglucosamine mutase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR006352
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0016868 intramolecular transferase activity, phosphotransferases GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR005841
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0000287 magnesium ion binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR006352
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Approved name glmM Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0010439
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Person Approved locus tag ECDH10B_3350 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu
Reference: Escherichia coli K-12 DH10B 		Feb 2008
Product
Person Approved product phosphoglucosamine mutase Experimental - PubMed ID: 10671448
Reference: Escherichia coli 		Mar 2007
Protein Family
Automated Process Approved protein family IPR005843 Alpha-D-phosphohexomutase, C-terminal Protein Sequence Similarity - InterPro Domain: IPR005843
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III Protein Sequence Similarity - InterPro Domain: IPR005846
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR006352 Phosphoglucosamine mutase, bacterial type Protein Sequence Similarity - InterPro Domain: IPR006352
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III Protein Sequence Similarity - InterPro Domain: IPR016055
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR016066 Alpha-D-phosphohexomutase, conserved site Protein Sequence Similarity - InterPro Domain: IPR016066
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II Protein Sequence Similarity - InterPro Domain: IPR005845
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I Protein Sequence Similarity - InterPro Domain: IPR005844
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR005841 Alpha-D-phosphohexomutase superfamily Protein Sequence Similarity - InterPro Domain: IPR005841
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Other
Person Approved comment 100% identical to E. coli K-12 MG1655 feature ABE-0010439 Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0010439
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Gene Ontology
Automated Process Approved GO biological process GO:0005975 carbohydrate metabolic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR005841
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0000287 magnesium ion binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR006352
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0016868 intramolecular transferase activity, phosphotransferases GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR005841
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0008966 phosphoglucosamine mutase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR006352
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0000309 glmM CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0000227 glmM CDS
Ortholog
Automated Process Uncurated Go view Dickeya dadantii 3937 ABF-0018118 glmM CDS
Automated Process Uncurated Go view Erwinia tasmaniensis Et1/99 [T] AFI-0000376 glmM CDS
Automated Process Uncurated Go view Escherichia albertii TW07627 AFX-0002261 glmM CDS
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0008113 glmM CDS
Automated Process Uncurated Go view Escherichia coli 536 (UPEC) AEF-0003295 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0007923 glmM CDS
Automated Process Uncurated Go view Escherichia coli APEC O1 (APEC) AEG-0003243 glmM CDS
Automated Process Uncurated Go view Escherichia coli ATCC 8739 AEM-0005944 CDS
Automated Process Uncurated Go view Escherichia coli B171 (EPEC) ADN-0010098 glmM CDS
Automated Process Uncurated Go view Escherichia coli B7A (ETEC) ADK-0008381 CDS
Automated Process Uncurated Go view Escherichia coli CFT073 (UPEC) ABR-0080106 glmM CDS
Automated Process Uncurated Go view Escherichia coli E110019 (EPEC) ADM-0005461 glmM CDS
Automated Process Uncurated Go view Escherichia coli E22 (EPEC) ADL-0005726 glmM CDS
Automated Process Uncurated Go view Escherichia coli E2348/69 (EPEC) BCI-0003683 glmM CDS
Automated Process Uncurated Go view Escherichia coli E24377A (ETEC) ADO-0008093 glmM CDS
Automated Process Uncurated Go view Escherichia coli EC4024 (EHEC) BBI-0002856 CDS
Automated Process Uncurated Go view Escherichia coli EC4042 (EHEC) BBA-0007838 glmM CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0006353 glmM CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0007885 glmM CDS
Automated Process Uncurated Go view Escherichia coli EC4113 (EHEC) BAY-0007345 glmM CDS
Automated Process Uncurated Go view Escherichia coli EC4115 (EHEC) BAS-0009334 glmM CDS
Automated Process Uncurated Go view Escherichia coli EC4196 (EHEC) BAX-0005830 glmM CDS
Automated Process Uncurated Go view Escherichia coli EC4206 (EHEC) BAW-0007141 glmM CDS
Automated Process Uncurated Go view Escherichia coli EC4401 (EHEC) BAV-0006122 glmM CDS
Automated Process Uncurated Go view Escherichia coli EC4486 (EHEC) BAU-0009026 glmM CDS
Automated Process Uncurated Go view Escherichia coli EC4501 (EHEC) BAT-0007721 glmM CDS
Automated Process Uncurated Go view Escherichia coli EC508 (EHEC) BBJ-0005528 glmM CDS
Automated Process Uncurated Go view Escherichia coli EC869 (EHEC) BBC-0006372 glmM CDS
Automated Process Uncurated Go view Escherichia coli EDL933 (EHEC) ABH-0028209 glmM CDS
Automated Process Uncurated Go view Escherichia coli F11 (UPEC) ADQ-0007213 glmM CDS
Automated Process Uncurated Go view Escherichia coli HS ADR-0008055 glmM CDS
Person Uncurated Go view Escherichia coli K-12 MG1655 ABE-0010439 glmM CDS
Automated Process Uncurated Go view Escherichia coli K-12 W3110 ADY-0003245 glmM CDS
Automated Process Uncurated Go view Escherichia coli SE11 AFS-0003525 CDS
Automated Process Uncurated Go view Escherichia coli SMS-3-5 AFT-0003470 glmM CDS
Automated Process Uncurated Go view Escherichia coli Sakai (EHEC) ACA-0134119 glmM CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0006026 CDS
Automated Process Uncurated Go view Escherichia coli UTI89 (UPEC) AEA-0003617 mrsA CDS
Automated Process Uncurated Go view Pectobacterium atrosepticum SCRI1043 ABL-0060928 glmM CDS
Automated Process Uncurated Go view Pectobacterium carotovorum WPP14 ADT-0003360 mrsA CDS
Automated Process Uncurated Go view Pectobacterium parmentieri WPP163 AFJ-0004262 glmM CDS
Automated Process Uncurated Go view Salmonella Agona SL483 BBX-0007650 glmM CDS
Automated Process Uncurated Go view Salmonella Arizonae CDC 346-86 BCD-0004538 CDS
Automated Process Uncurated Go view Salmonella Choleraesuis SC-B67 ADB-0003778 glmM CDS
Automated Process Uncurated Go view Salmonella Dublin CT_02021853 BCB-0007902 glmM CDS
Automated Process Uncurated Go view Salmonella Enteritidis P125109 BCF-0010198 mrsA CDS
Automated Process Uncurated Go view Salmonella Gallinarum 287/91 BCG-0009650 mrsA CDS
Automated Process Uncurated Go view Salmonella Hadar RI_05P066 BBT-0007161 glmM CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL476 BBV-0007948 glmM CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL486 BBW-0006867 glmM CDS
Automated Process Uncurated Go view Salmonella Javiana GA_MM04042433 BCA-0005867 glmM CDS
Automated Process Uncurated Go view Salmonella Kentucky CDC 191 BBZ-0006332 glmM CDS
Automated Process Uncurated Go view Salmonella Kentucky CVM29188 BBP-0007044 glmM CDS
Automated Process Uncurated Go view Salmonella Newport SL254 BBQ-0007910 glmM CDS
Automated Process Uncurated Go view Salmonella Newport SL317 BBR-0005155 glmM CDS
Automated Process Uncurated Go view Salmonella Paratyphi A AKU_12601 BCH-0003194 CDS
Automated Process Uncurated Go view Salmonella Paratyphi A ATCC 9150 ADA-0003160 mrsA CDS
Automated Process Uncurated Go view Salmonella Paratyphi B SPB7 BCC-0004125 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA23 BBN-0008071 glmM CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA29 BBM-0007260 glmM CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund CVM19633 BBO-0007554 glmM CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund SL480 BBY-0007225 glmM CDS
Automated Process Uncurated Go view Salmonella Typhi CT18 ABX-0112335 glmM CDS
Automated Process Uncurated Go view Salmonella Typhi Ty2 ABS-0084931 glmM CDS
Automated Process Uncurated Go view Salmonella Typhimurium LT2 [T] ABU-0100229 glmM CDS
Automated Process Uncurated Go view Salmonella Virchow SL491 BBS-0005938 glmM CDS
Automated Process Uncurated Go view Salmonella Weltevreden SL484 BBU-0006018 glmM CDS
Automated Process Uncurated Go view Salmonella enterica CVM23701 BBL-0004568 glmM CDS
Automated Process Uncurated Go view Shigella boydii 227 ADV-0003505 mrsA CDS
Automated Process Uncurated Go view Shigella boydii BS512 ADJ-0009011 glmM CDS
Automated Process Uncurated Go view Shigella dysenteriae 1012 BAA-0006458 glmM CDS
Automated Process Uncurated Go view Shigella dysenteriae 197 ADU-0003822 mrsA CDS
Automated Process Uncurated Go view Shigella flexneri 2457T ABQ-0074632 glmM CDS
Automated Process Uncurated Go view Shigella flexneri 301 ABT-0089455 mrsA CDS
Automated Process Uncurated Go view Shigella flexneri 8401 BAG-0003413 mrsA CDS
Automated Process Uncurated Go view Shigella sonnei 046 ADD-0003632 glmM CDS
Automated Process Uncurated Go view Yersinia bercovieri ATCC 43970 [T] AEK-0000998 CDS
Automated Process Uncurated Go view Yersinia enterocolitica 8081 BAH-0001353 mrsA CDS
Automated Process Uncurated Go view Yersinia frederiksenii ATCC 33641 [T] AEI-0002133 glmM CDS
Automated Process Uncurated Go view Yersinia intermedia ATCC 29909 [T] AEH-0002551 glmM CDS
Automated Process Uncurated Go view Yersinia mollaretii ATCC 43969 [T] AEJ-0001852 CDS
Automated Process Uncurated Go view Yersinia pestis 91001 (biovar Microtus) ACQ-0235529 glmM CDS
Automated Process Uncurated Go view Yersinia pestis Angola (biovar Pestoides) ADI-0008111 glmM CDS
Automated Process Uncurated Go view Yersinia pestis Antiqua (biovar Antiqua) BAE-0000063 glmM CDS
Automated Process Uncurated Go view Yersinia pestis B42003004 (biovar Antiqua) BAL-0008058 glmM CDS
Automated Process Uncurated Go view Yersinia pestis CA88-4125 (biovar Orientalis) BAF-0003678 mrsA CDS
Automated Process Uncurated Go view Yersinia pestis CO92 (biovar Orientalis) ABY-0127114 glmM CDS
Automated Process Uncurated Go view Yersinia pestis E1979001 (biovar Antiqua) BAM-0007863 glmM CDS
Automated Process Uncurated Go view Yersinia pestis F1991016 (biovar Orientalis) BAQ-0008559 glmM CDS
Automated Process Uncurated Go view Yersinia pestis IP275 (biovar Orientalis) BAC-0006823 glmM CDS
Automated Process Uncurated Go view Yersinia pestis K1973002 (biovar Mediaevalis) BAO-0004116 glmM CDS
Automated Process Uncurated Go view Yersinia pestis KIM (biovar Mediaevalis) ABI-0030314 glmM CDS
Automated Process Uncurated Go view Yersinia pestis MG05-1020 (biovar Orientalis) BAP-0006519 glmM CDS
Automated Process Uncurated Go view Yersinia pestis Nepal516 (biovar Antiqua) BAD-0003900 glmM CDS
Automated Process Uncurated Go view Yersinia pestis Pestoides F (biovar Pestoides) BAI-0004264 CDS
Automated Process Uncurated Go view Yersinia pestis UG05-0454 (biovar Antiqua) BAN-0007478 glmM CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP31758 ADS-0007623 glmM CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP32953 ACZ-0000511 glmM CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis PB1/+ AFV-0000598 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis YPIII AFW-0004430 CDS
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 3413500 to 3424837
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
AEC-0000001sourceforward14686137Contains
AEC-0002960yhbCCDScomplement34133213413773Downstream
AEC-0004166metYtRNAcomplement34139803414056Downstream
AEC-0002961argGCDSforward34144043415747Downstream
AEC-0002962yhbXCDScomplement34157553417380Downstream
AEC-0004167leuUtRNAcomplement34178393417925Downstream
AEC-0002963secGCDScomplement34179403418272Downstream
AEC-0002964glmMCDScomplement34185003419837Matches
AEC-0002965folPCDScomplement34198303420678Overlaps Upstream
AEC-0002966ftsHCDScomplement34207683422702Upstream
AEC-0002967rrmJCDScomplement34228023423431Upstream
AEC-0002968yhbYCDSforward34235573423850Upstream
AEC-0002969greACDScomplement34240063424482Upstream
AEC-0002970dacBCDSforward34247303426163Upstream
Release Notes to toptop
submitted to GenBank; assigned accession number CP000948