Escherichia coli K-12 DH10B
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Working With: Genome: Escherichia coli K-12 DH10B Version: 10

AEC-0002965 (folP) - Escherichia coli K-12 DH10B - Feature Annotation

ASAP ID
AEC-0002965 showshow history
Names
folP ECDH10B_3351
Product
7,8-dihydropteroate synthase
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome complement 3419830 3420678 849 283
Sequence

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Context

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Pre-Run Search Results
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InterProScan
BLASTP
Protein Families to toptop
Author Approval Family Annotated
Automated Process Approved IPR000489 (IPR000489 Pterin-binding domain) Jul 2009
Automated Process Approved IPR006390 (IPR006390 Dihydropteroate synthase) Jul 2009
Automated Process Approved IPR011005 (IPR011005 Dihydropteroate synthase-like) Jul 2009
Protein Domains to toptop
Internal error getting result
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Automated Process Approved GO biological process GO:0009396 folic acid-containing compound biosynthetic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR000489
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO biological process GO:0044237 cellular metabolic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR011005
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0004156 dihydropteroate synthase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR000489
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Approved name folP Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0010441
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Person Approved locus tag ECDH10B_3351 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu
Reference: Escherichia coli K-12 DH10B 		Feb 2008
Product
Person Approved product 7,8-dihydropteroate synthase Published Annotation - PubMed ID: 16397293
Reference: Escherichia coli K-12 		Mar 2007
Protein Family
Automated Process Approved protein family IPR000489 Pterin-binding domain Protein Sequence Similarity - InterPro Domain: IPR000489
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR011005 Dihydropteroate synthase-like Protein Sequence Similarity - InterPro Domain: IPR011005
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR006390 Dihydropteroate synthase Protein Sequence Similarity - InterPro Domain: IPR006390
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Other
Person Approved comment 100% identical to E. coli K-12 MG1655 feature ABE-0010441 Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0010441
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Gene Ontology
Automated Process Approved GO biological process GO:0044237 cellular metabolic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR011005
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO biological process GO:0009396 folic acid-containing compound biosynthetic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR000489
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0004156 dihydropteroate synthase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR000489
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0000516 folP CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0000369 folP CDS
Ortholog
Automated Process Uncurated Go view Dickeya dadantii 3937 ABF-0018119 folP CDS
Automated Process Uncurated Go view Erwinia tasmaniensis Et1/99 [T] AFI-0000375 folP CDS
Automated Process Uncurated Go view Escherichia albertii TW07627 AFX-0002260 folP CDS
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0008114 folP CDS
Automated Process Uncurated Go view Escherichia coli 536 (UPEC) AEF-0003296 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0007922 folP CDS
Automated Process Uncurated Go view Escherichia coli APEC O1 (APEC) AEG-0003244 folP CDS
Automated Process Uncurated Go view Escherichia coli ATCC 8739 AEM-0005943 CDS
Automated Process Uncurated Go view Escherichia coli B171 (EPEC) ADN-0010099 folP CDS
Automated Process Uncurated Go view Escherichia coli B7A (ETEC) ADK-0008380 CDS
Automated Process Uncurated Go view Escherichia coli CFT073 (UPEC) ABR-0080107 folP CDS
Automated Process Uncurated Go view Escherichia coli E110019 (EPEC) ADM-0005460 folP CDS
Automated Process Uncurated Go view Escherichia coli E22 (EPEC) ADL-0005727 folP CDS
Automated Process Uncurated Go view Escherichia coli E2348/69 (EPEC) BCI-0003684 folP CDS
Automated Process Uncurated Go view Escherichia coli E24377A (ETEC) ADO-0008094 folP1 CDS
Automated Process Uncurated Go view Escherichia coli EC4024 (EHEC) BBI-0002857 CDS
Automated Process Uncurated Go view Escherichia coli EC4042 (EHEC) BBA-0007839 folP CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0006354 folP CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0007886 folP CDS
Automated Process Uncurated Go view Escherichia coli EC4113 (EHEC) BAY-0007344 folP CDS
Automated Process Uncurated Go view Escherichia coli EC4115 (EHEC) BAS-0009335 folP CDS
Automated Process Uncurated Go view Escherichia coli EC4196 (EHEC) BAX-0005829 folP CDS
Automated Process Uncurated Go view Escherichia coli EC4206 (EHEC) BAW-0007142 folP CDS
Automated Process Uncurated Go view Escherichia coli EC4401 (EHEC) BAV-0006123 folP CDS
Automated Process Uncurated Go view Escherichia coli EC4486 (EHEC) BAU-0009027 folP CDS
Automated Process Uncurated Go view Escherichia coli EC4501 (EHEC) BAT-0007722 folP CDS
Automated Process Uncurated Go view Escherichia coli EC508 (EHEC) BBJ-0005529 folP CDS
Automated Process Uncurated Go view Escherichia coli EC869 (EHEC) BBC-0006373 folP CDS
Automated Process Uncurated Go view Escherichia coli EDL933 (EHEC) ABH-0028210 folP CDS
Automated Process Uncurated Go view Escherichia coli F11 (UPEC) ADQ-0007212 folP CDS
Automated Process Uncurated Go view Escherichia coli HS ADR-0008056 folP CDS
Person Uncurated Go view Escherichia coli K-12 MG1655 ABE-0010441 folP CDS
Automated Process Uncurated Go view Escherichia coli K-12 W3110 ADY-0003246 folP CDS
Automated Process Uncurated Go view Escherichia coli SE11 AFS-0003526 CDS
Automated Process Uncurated Go view Escherichia coli SMS-3-5 AFT-0003471 folP CDS
Automated Process Uncurated Go view Escherichia coli Sakai (EHEC) ACA-0134120 folP CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0006027 CDS
Automated Process Uncurated Go view Escherichia coli UTI89 (UPEC) AEA-0003618 folP CDS
Automated Process Uncurated Go view Pectobacterium atrosepticum SCRI1043 ABL-0060927 folP CDS
Automated Process Uncurated Go view Pectobacterium brasiliensis 1692 AED-0000361 dhpS CDS
Automated Process Uncurated Go view Pectobacterium carotovorum WPP14 ADT-0001362 dhpS CDS
Automated Process Uncurated Go view Pectobacterium parmentieri WPP163 AFJ-0004261 folP CDS
Automated Process Uncurated Go view Salmonella Agona SL483 BBX-0007651 folP CDS
Automated Process Uncurated Go view Salmonella Arizonae CDC 346-86 BCD-0004536 CDS
Automated Process Uncurated Go view Salmonella Dublin CT_02021853 BCB-0007903 folP CDS
Automated Process Uncurated Go view Salmonella Enteritidis P125109 BCF-0010204 folP CDS
Automated Process Uncurated Go view Salmonella Gallinarum 287/91 BCG-0009656 folP CDS
Automated Process Uncurated Go view Salmonella Hadar RI_05P066 BBT-0007160 folP CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL476 BBV-0007949 folP CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL486 BBW-0006868 folP CDS
Automated Process Uncurated Go view Salmonella Javiana GA_MM04042433 BCA-0005868 folP CDS
Automated Process Uncurated Go view Salmonella Kentucky CDC 191 BBZ-0006333 folP CDS
Automated Process Uncurated Go view Salmonella Kentucky CVM29188 BBP-0007045 folP CDS
Automated Process Uncurated Go view Salmonella Newport SL254 BBQ-0007911 folP CDS
Automated Process Uncurated Go view Salmonella Newport SL317 BBR-0005154 folP CDS
Automated Process Uncurated Go view Salmonella Paratyphi A AKU_12601 BCH-0003195 CDS
Automated Process Uncurated Go view Salmonella Paratyphi A ATCC 9150 ADA-0003161 folP CDS
Automated Process Uncurated Go view Salmonella Paratyphi B SPB7 BCC-0004126 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA23 BBN-0008072 folP CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA29 BBM-0007259 folP CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund CVM19633 BBO-0007555 folP CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund SL480 BBY-0007226 folP CDS
Automated Process Uncurated Go view Salmonella Typhi CT18 ABX-0112338 folP CDS
Automated Process Uncurated Go view Salmonella Typhi Ty2 ABS-0084932 folP CDS
Automated Process Uncurated Go view Salmonella Typhimurium LT2 [T] ABU-0100231 folP CDS
Automated Process Uncurated Go view Salmonella Virchow SL491 BBS-0005937 folP CDS
Automated Process Uncurated Go view Salmonella Weltevreden SL484 BBU-0006017 folP CDS
Automated Process Uncurated Go view Salmonella enterica CVM23701 BBL-0004567 folP CDS
Automated Process Uncurated Go view Shigella boydii 227 ADV-0003504 folP CDS
Automated Process Uncurated Go view Shigella boydii BS512 ADJ-0009010 folP CDS
Automated Process Uncurated Go view Shigella dysenteriae 1012 BAA-0006459 folP CDS
Automated Process Uncurated Go view Shigella dysenteriae 197 ADU-0003823 folP CDS
Automated Process Uncurated Go view Shigella flexneri 2457T ABQ-0074633 folP CDS
Automated Process Uncurated Go view Shigella flexneri 301 ABT-0089456 folP CDS
Automated Process Uncurated Go view Shigella flexneri 8401 BAG-0003414 folP CDS
Automated Process Uncurated Go view Shigella sonnei 046 ADD-0003633 folP CDS
Automated Process Uncurated Go view Yersinia bercovieri ATCC 43970 [T] AEK-0000997 CDS
Automated Process Uncurated Go view Yersinia enterocolitica 8081 BAH-0001349 dhpS CDS
Automated Process Uncurated Go view Yersinia frederiksenii ATCC 33641 [T] AEI-0002132 folP CDS
Automated Process Uncurated Go view Yersinia intermedia ATCC 29909 [T] AEH-0002552 folP CDS
Automated Process Uncurated Go view Yersinia mollaretii ATCC 43969 [T] AEJ-0001851 CDS
Automated Process Uncurated Go view Yersinia pestis 91001 (biovar Microtus) ACQ-0235528 folP CDS
Automated Process Uncurated Go view Yersinia pestis Angola (biovar Pestoides) ADI-0008110 folP CDS
Automated Process Uncurated Go view Yersinia pestis Antiqua (biovar Antiqua) BAE-0000064 folP CDS
Automated Process Uncurated Go view Yersinia pestis B42003004 (biovar Antiqua) BAL-0008059 folP CDS
Automated Process Uncurated Go view Yersinia pestis CA88-4125 (biovar Orientalis) BAF-0003679 folP CDS
Automated Process Uncurated Go view Yersinia pestis CO92 (biovar Orientalis) ABY-0127117 folP CDS
Automated Process Uncurated Go view Yersinia pestis E1979001 (biovar Antiqua) BAM-0007862 folP CDS
Automated Process Uncurated Go view Yersinia pestis F1991016 (biovar Orientalis) BAQ-0008558 folP CDS
Automated Process Uncurated Go view Yersinia pestis FV-1 (biovar Orientalis) BAK-0002053 CDS
Automated Process Uncurated Go view Yersinia pestis IP275 (biovar Orientalis) BAC-0006822 folP CDS
Automated Process Uncurated Go view Yersinia pestis K1973002 (biovar Mediaevalis) BAO-0004115 folP CDS
Automated Process Uncurated Go view Yersinia pestis KIM (biovar Mediaevalis) ABI-0030313 folP CDS
Automated Process Uncurated Go view Yersinia pestis MG05-1020 (biovar Orientalis) BAP-0006518 folP CDS
Automated Process Uncurated Go view Yersinia pestis Nepal516 (biovar Antiqua) BAD-0003901 folP CDS
Automated Process Uncurated Go view Yersinia pestis Pestoides F (biovar Pestoides) BAI-0004265 CDS
Automated Process Uncurated Go view Yersinia pestis UG05-0454 (biovar Antiqua) BAN-0007477 folP CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP31758 ADS-0007624 folP CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP32953 ACZ-0000510 folP CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis PB1/+ AFV-0000597 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis YPIII AFW-0004431 CDS
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 3414830 to 3425678
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
AEC-0000001sourceforward14686137Contains
AEC-0002961argGCDSforward34144043415747Downstream
AEC-0002962yhbXCDScomplement34157553417380Downstream
AEC-0004167leuUtRNAcomplement34178393417925Downstream
AEC-0002963secGCDScomplement34179403418272Downstream
AEC-0002964glmMCDScomplement34185003419837Overlaps Downstream
AEC-0002965folPCDScomplement34198303420678Matches
AEC-0002966ftsHCDScomplement34207683422702Upstream
AEC-0002967rrmJCDScomplement34228023423431Upstream
AEC-0002968yhbYCDSforward34235573423850Upstream
AEC-0002969greACDScomplement34240063424482Upstream
AEC-0002970dacBCDSforward34247303426163Upstream
Release Notes to toptop
submitted to GenBank; assigned accession number CP000948