Escherichia coli K-12 DH10B
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Working With: Genome: Escherichia coli K-12 DH10B Version: 10

AEC-0003136 (cysG) - Escherichia coli K-12 DH10B - Feature Annotation

ASAP ID
AEC-0003136 showshow history
Names
cysG ECDH10B_3544
Product
fused siroheme synthase 1,3-dimethyluroporphyriongen III dehydrogenase and siroheme ferrochelatase; uroporphyrinogen methyltransferase
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome forward 3593595 3594968 1374 458
Sequence

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Context

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Pre-Run Search Results
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InterProScan
BLASTP
Protein Families to toptop
Author Approval Family Annotated
Automated Process Approved IPR006367 (IPR006367 Sirohaem synthase, N-terminal) Jul 2009
Automated Process Approved IPR006366 (IPR006366 Uroporphyrin-III C-methyltransferase) Jul 2009
Automated Process Approved IPR016040 (IPR016040 NAD(P)-binding domain) Jul 2009
Automated Process Approved IPR014777 (IPR014777 Tetrapyrrole methylase, subdomain 1) Jul 2009
Automated Process Approved IPR014776 (IPR014776 Tetrapyrrole methylase, subdomain 2) Jul 2009
Automated Process Approved IPR003043 (IPR003043 Uroporphiryn-III C-methyltransferase, conserved site) Jul 2009
Automated Process Approved IPR000878 (IPR000878 Tetrapyrrole methylase) Jul 2009
Protein Domains to toptop
Internal error getting result
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Automated Process Approved GO biological process GO:0006779 porphyrin-containing compound biosynthetic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR006367
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO biological process GO:0008152 metabolic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR016040
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0005488 binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR016040
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0008168 methyltransferase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR006366
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0003824 catalytic activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR016040
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Approved name cysG Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0011010
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Person Approved locus tag ECDH10B_3544 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu
Reference: Escherichia coli K-12 DH10B 		Feb 2008
Product
Person Approved product fused siroheme synthase 1,3-dimethyluroporphyriongen III dehydrogenase and siroheme ferrochelatase; uroporphyrinogen methyltransferase Published Annotation - PubMed ID: 16397293
Reference: Escherichia coli K-12 		Mar 2007
Protein Family
Automated Process Approved protein family IPR016040 NAD(P)-binding domain Protein Sequence Similarity - InterPro Domain: IPR016040
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR006366 Uroporphyrin-III C-methyltransferase Protein Sequence Similarity - InterPro Domain: IPR006366
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR006367 Sirohaem synthase, N-terminal Protein Sequence Similarity - InterPro Domain: IPR006367
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR000878 Tetrapyrrole methylase Protein Sequence Similarity - InterPro Domain: IPR000878
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR003043 Uroporphiryn-III C-methyltransferase, conserved site Protein Sequence Similarity - InterPro Domain: IPR003043
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR014776 Tetrapyrrole methylase, subdomain 2 Protein Sequence Similarity - InterPro Domain: IPR014776
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR014777 Tetrapyrrole methylase, subdomain 1 Protein Sequence Similarity - InterPro Domain: IPR014777
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Other
Person Uncurated EC number 4.99.1.4 Protein Sequence Similarity - ASAP FeatureID: ABE-0011010
Reference: Escherichia coli K-12 MG1655 		Jan 2009
Person Uncurated EC number 1.3.1.76 Protein Sequence Similarity - ASAP FeatureID: ABE-0011010
Reference: Escherichia coli K-12 MG1655 		Jan 2009
Person Uncurated EC number 2.1.1.107 Protein Sequence Similarity - ASAP FeatureID: ABE-0011010
Reference: Escherichia coli K-12 MG1655 		Jan 2009
Person Approved comment 100% identical to E. coli K-12 MG1655 feature ABE-0011010 Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0011010
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Person Uncurated db xref UniProtKB:B1X716 Published Annotation - Swiss-Prot Accession Number: B1X716
Reference: Escherichia coli K-12 DH10B 		Jan 2009
Gene Ontology
Automated Process Approved GO biological process GO:0008152 metabolic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR016040
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO biological process GO:0006779 porphyrin-containing compound biosynthetic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR006367
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0008168 methyltransferase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR006366
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0005488 binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR016040
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0003824 catalytic activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR016040
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0000061 cysG CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0000047 cysG CDS
Ortholog
Automated Process Uncurated Go view Dickeya dadantii 3937 ABF-0014887 cysG1 CDS
Automated Process Uncurated Go view Erwinia tasmaniensis Et1/99 [T] AFI-0002802 cysG CDS
Automated Process Uncurated Go view Escherichia albertii TW07627 AFX-0002045 cysG CDS
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0008814 cysG CDS
Automated Process Uncurated Go view Escherichia coli 536 (UPEC) AEF-0003497 cysG CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0007728 cysG CDS
Automated Process Uncurated Go view Escherichia coli APEC O1 (APEC) AEG-0003420 cysG CDS
Automated Process Uncurated Go view Escherichia coli ATCC 8739 AEM-0005723 CDS
Automated Process Uncurated Go view Escherichia coli B171 (EPEC) ADN-0006385 cysG CDS
Automated Process Uncurated Go view Escherichia coli B7A (ETEC) ADK-0008806 CDS
Automated Process Uncurated Go view Escherichia coli CFT073 (UPEC) ABR-0080320 cysG CDS
Automated Process Uncurated Go view Escherichia coli E110019 (EPEC) ADM-0007141 cysG CDS
Automated Process Uncurated Go view Escherichia coli E22 (EPEC) ADL-0005385 cysG CDS
Automated Process Uncurated Go view Escherichia coli E2348/69 (EPEC) BCI-0003855 cysG CDS
Automated Process Uncurated Go view Escherichia coli E24377A (ETEC) ADO-0008272 cysG CDS
Automated Process Uncurated Go view Escherichia coli EC4024 (EHEC) BBI-0004633 CDS
Automated Process Uncurated Go view Escherichia coli EC4042 (EHEC) BBA-0008019 cysG CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0006532 cysG CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0006078 cysG CDS
Automated Process Uncurated Go view Escherichia coli EC4113 (EHEC) BAY-0009922 cysG CDS
Automated Process Uncurated Go view Escherichia coli EC4115 (EHEC) BAS-0009513 cysG CDS
Automated Process Uncurated Go view Escherichia coli EC4196 (EHEC) BAX-0005430 cysG CDS
Automated Process Uncurated Go view Escherichia coli EC4206 (EHEC) BAW-0007328 cysG CDS
Automated Process Uncurated Go view Escherichia coli EC4401 (EHEC) BAV-0005111 cysG CDS
Automated Process Uncurated Go view Escherichia coli EC4486 (EHEC) BAU-0005180 cysG CDS
Automated Process Uncurated Go view Escherichia coli EC4501 (EHEC) BAT-0005022 cysG CDS
Automated Process Uncurated Go view Escherichia coli EC508 (EHEC) BBJ-0004904 cysG CDS
Automated Process Uncurated Go view Escherichia coli EC869 (EHEC) BBC-0005506 cysG CDS
Automated Process Uncurated Go view Escherichia coli EDL933 (EHEC) ABH-0028386 cysG CDS
Automated Process Uncurated Go view Escherichia coli F11 (UPEC) ADQ-0006572 cysG CDS
Automated Process Uncurated Go view Escherichia coli HS ADR-0008252 cysG CDS
Person Approved Go view Escherichia coli K-12 MG1655 ABE-0011010 cysG CDS
Automated Process Approved Go view Escherichia coli K-12 W3110 ADY-0004001 cysG CDS
Automated Process Uncurated Go view Escherichia coli SE11 AFS-0003701 CDS
Automated Process Uncurated Go view Escherichia coli SMS-3-5 AFT-0003647 cysG CDS
Automated Process Uncurated Go view Escherichia coli Sakai (EHEC) ACA-0134291 cysG CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0002562 CDS
Automated Process Uncurated Go view Escherichia coli UTI89 (UPEC) AEA-0003881 cysG CDS
Automated Process Uncurated Go view Pectobacterium atrosepticum SCRI1043 ABL-0064406 cysG2 CDS
Automated Process Uncurated Go view Pectobacterium brasiliensis 1692 AED-0002416 cysG2 CDS
Automated Process Uncurated Go view Pectobacterium carotovorum WPP14 ADT-0002218 cysG2 CDS
Automated Process Uncurated Go view Pectobacterium parmentieri WPP163 AFJ-0002442 cysG2 CDS
Automated Process Uncurated Go view Salmonella Agona SL483 BBX-0007842 CDS
Automated Process Uncurated Go view Salmonella Arizonae CDC 346-86 BCD-0004328 CDS
Automated Process Uncurated Go view Salmonella Choleraesuis SC-B67 ADB-0003988 cysG CDS
Automated Process Uncurated Go view Salmonella Dublin CT_02021853 BCB-0008095 cysG CDS
Automated Process Uncurated Go view Salmonella Enteritidis P125109 BCF-0010821 cysG CDS
Automated Process Uncurated Go view Salmonella Gallinarum 287/91 BCG-0012125 cysG CDS
Automated Process Uncurated Go view Salmonella Hadar RI_05P066 BBT-0005399 cysG CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL476 BBV-0008142 CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL486 BBW-0005492 CDS
Automated Process Uncurated Go view Salmonella Javiana GA_MM04042433 BCA-0006299 cysG CDS
Automated Process Uncurated Go view Salmonella Kentucky CDC 191 BBZ-0006995 CDS
Automated Process Uncurated Go view Salmonella Kentucky CVM29188 BBP-0007238 CDS
Automated Process Uncurated Go view Salmonella Newport SL254 BBQ-0008104 cysG CDS
Automated Process Uncurated Go view Salmonella Newport SL317 BBR-0006749 cysG CDS
Automated Process Uncurated Go view Salmonella Paratyphi A AKU_12601 BCH-0003376 CDS
Automated Process Uncurated Go view Salmonella Paratyphi A ATCC 9150 ADA-0003342 cysG CDS
Automated Process Uncurated Go view Salmonella Paratyphi B SPB7 BCC-0004347 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA23 BBN-0008264 cysG CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA29 BBM-0004727 cysG CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund CVM19633 BBO-0007744 cysG CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund SL480 BBY-0004549 cysG CDS
Automated Process Uncurated Go view Salmonella Typhi CT18 ABX-0114093 cysG CDS
Automated Process Uncurated Go view Salmonella Typhi Ty2 ABS-0085754 cysG CDS
Automated Process Uncurated Go view Salmonella Typhimurium LT2 [T] ABU-0100766 cysG CDS
Automated Process Uncurated Go view Salmonella Virchow SL491 BBS-0005743 cysG CDS
Automated Process Uncurated Go view Salmonella Weltevreden SL484 BBU-0005169 cysG CDS
Automated Process Uncurated Go view Salmonella enterica CVM23701 BBL-0008626 cysG CDS
Automated Process Uncurated Go view Shigella boydii 227 ADV-0003659 cysG CDS
Automated Process Uncurated Go view Shigella boydii BS512 ADJ-0009163 cysG CDS
Automated Process Uncurated Go view Shigella dysenteriae 1012 BAA-0007501 cysG CDS
Automated Process Uncurated Go view Shigella dysenteriae 197 ADU-0003998 cysG CDS
Automated Process Uncurated Go view Shigella flexneri 2457T ABQ-0075690 cysG CDS
Automated Process Uncurated Go view Shigella flexneri 301 ABT-0089624 cysG CDS
Automated Process Uncurated Go view Shigella flexneri 8401 BAG-0003586 cysG CDS
Automated Process Uncurated Go view Shigella sonnei 046 ADD-0003812 cysG CDS
Automated Process Uncurated Go view Yersinia bercovieri ATCC 43970 [T] AEK-0001493 CDS
Automated Process Uncurated Go view Yersinia enterocolitica 8081 BAH-0011442 cysG2 CDS
Automated Process Uncurated Go view Yersinia frederiksenii ATCC 33641 [T] AEI-0001095 cysG_3 CDS
Automated Process Uncurated Go view Yersinia intermedia ATCC 29909 [T] AEH-0001918 cysG_1 CDS
Automated Process Uncurated Go view Yersinia mollaretii ATCC 43969 [T] AEJ-0000985 CDS
Automated Process Uncurated Go view Yersinia pestis 91001 (biovar Microtus) ACQ-0234580 cysG1 CDS
Automated Process Uncurated Go view Yersinia pestis Angola (biovar Pestoides) ADI-0007842 cysG1 CDS
Automated Process Uncurated Go view Yersinia pestis Antiqua (biovar Antiqua) BAE-0003954 cysG CDS
Automated Process Uncurated Go view Yersinia pestis B42003004 (biovar Antiqua) BAL-0007381 cysG1 CDS
Automated Process Uncurated Go view Yersinia pestis CA88-4125 (biovar Orientalis) BAF-0003192 cysG CDS
Automated Process Uncurated Go view Yersinia pestis CO92 (biovar Orientalis) ABY-0115818 cysG CDS
Automated Process Uncurated Go view Yersinia pestis E1979001 (biovar Antiqua) BAM-0006932 cysG1 CDS
Automated Process Uncurated Go view Yersinia pestis F1991016 (biovar Orientalis) BAQ-0008410 cysG1 CDS
Automated Process Uncurated Go view Yersinia pestis FV-1 (biovar Orientalis) BAK-0003381 CDS
Automated Process Uncurated Go view Yersinia pestis IP275 (biovar Orientalis) BAC-0005386 cysG1 CDS
Automated Process Uncurated Go view Yersinia pestis K1973002 (biovar Mediaevalis) BAO-0006817 cysG1 CDS
Automated Process Uncurated Go view Yersinia pestis KIM (biovar Mediaevalis) ABI-0033737 cysG CDS
Automated Process Uncurated Go view Yersinia pestis MG05-1020 (biovar Orientalis) BAP-0004978 cysG1 CDS
Automated Process Uncurated Go view Yersinia pestis Nepal516 (biovar Antiqua) BAD-0004683 cysG2 CDS
Automated Process Uncurated Go view Yersinia pestis Pestoides F (biovar Pestoides) BAI-0000100 cysG1 CDS
Automated Process Uncurated Go view Yersinia pestis UG05-0454 (biovar Antiqua) BAN-0004477 cysG1 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP31758 ADS-0007995 cysG1 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP32953 ACZ-0003861 cysG2 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis PB1/+ AFV-0004684 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis YPIII AFW-0000277 CDS
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 3588595 to 3599968
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
AEC-0000001sourceforward14686137Contains
AEC-0003132tsgACDSforward35883353589516Upstream
AEC-0003133nirBCDSforward35897783592321Upstream
AEC-0003134nirDCDSforward35923183592644Upstream
AEC-0003135nirCCDSforward35927703593576Upstream
AEC-0003136cysGCDSforward35935953594968Matches
AEC-0003137yhfLCDSforward35952153595382Downstream
AEC-0003138frlACDSforward35956773597014Downstream
AEC-0003139frlBCDSforward35970353598057Downstream
AEC-0004039frlCCDSforward35981073598937Downstream
AEC-0003140frlDCDSforward35989343599719Downstream
AEC-0003141frlRCDSforward35998193600550Downstream
Release Notes to toptop
submitted to GenBank; assigned accession number CP000948