Escherichia coli K-12 DH10B
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Working With: Genome: Escherichia coli K-12 DH10B Version: 10

AEC-0003181 (malQ) - Escherichia coli K-12 DH10B - Feature Annotation

ASAP ID
AEC-0003181 showshow history
Names
malQ ECDH10B_3591
Product
4-alpha-glucanotransferase (amylomaltase)
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome complement 3643753 3645837 2085 695
Sequence

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View sequence with flanking regions: bases upstream and bases downstream

Context

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Pre-Run Search Results
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InterProScan
BLASTP
Protein Families to toptop
Author Approval Family Annotated
Automated Process Approved IPR013781 (IPR013781 (DEPRECATED) Glycoside hydrolase, catalytic domain) Jul 2009
Automated Process Approved IPR003385 (IPR003385 Glycoside hydrolase, family 77) Jul 2009
Automated Process Approved IPR017853 (IPR017853 Glycoside hydrolase superfamily) Jul 2009
Protein Domains to toptop
Internal error getting result
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Automated Process Approved GO biological process GO:0005975 carbohydrate metabolic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR013781
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0004134 4-alpha-glucanotransferase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR003385
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0003824 catalytic activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR013781
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0043169 cation binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR013781
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Approved name malQ Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0011151
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Person Approved locus tag ECDH10B_3591 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu
Reference: Escherichia coli K-12 DH10B 		Feb 2008
Product
Person Approved product 4-alpha-glucanotransferase (amylomaltase) Published Annotation - PubMed ID: 16397293
Reference: Escherichia coli K-12 		Mar 2007
Protein Family
Automated Process Approved protein family IPR013781 (DEPRECATED) Glycoside hydrolase, catalytic domain Protein Sequence Similarity - InterPro Domain: IPR013781
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR017853 Glycoside hydrolase superfamily Protein Sequence Similarity - InterPro Domain: IPR017853
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR003385 Glycoside hydrolase, family 77 Protein Sequence Similarity - InterPro Domain: IPR003385
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Other
Person Approved comment 100% identical to E. coli K-12 MG1655 feature ABE-0011151 Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0011151
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Gene Ontology
Automated Process Approved GO biological process GO:0005975 carbohydrate metabolic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR013781
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0004134 4-alpha-glucanotransferase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR003385
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0003824 catalytic activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR013781
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0043169 cation binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR013781
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0000337 malQ CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0000592 malQ CDS
Ortholog
Automated Process Uncurated Go view Dickeya dadantii 3937 ABF-0015075 malQ CDS
Automated Process Uncurated Go view Erwinia tasmaniensis Et1/99 [T] AFI-0003339 malQ CDS
Automated Process Uncurated Go view Escherichia albertii TW07627 AFX-0001221 malQ CDS
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0004909 malQ CDS
Automated Process Uncurated Go view Escherichia coli 536 (UPEC) AEF-0003540 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0007679 malQ CDS
Automated Process Uncurated Go view Escherichia coli APEC O1 (APEC) AEG-0003458 malQ CDS
Automated Process Uncurated Go view Escherichia coli ATCC 8739 AEM-0005669 CDS
Automated Process Uncurated Go view Escherichia coli B171 (EPEC) ADN-0006437 malQ CDS
Automated Process Uncurated Go view Escherichia coli CFT073 (UPEC) ABR-0080369 malQ CDS
Automated Process Uncurated Go view Escherichia coli E110019 (EPEC) ADM-0007193 malQ CDS
Automated Process Uncurated Go view Escherichia coli E22 (EPEC) ADL-0005335 malQ CDS
Automated Process Uncurated Go view Escherichia coli E2348/69 (EPEC) BCI-0003898 malQ CDS
Automated Process Uncurated Go view Escherichia coli E24377A (ETEC) ADO-0008325 malQ CDS
Automated Process Uncurated Go view Escherichia coli EC4024 (EHEC) BBI-0004678 CDS
Automated Process Uncurated Go view Escherichia coli EC4042 (EHEC) BBA-0008062 malQ CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0006575 malQ CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0006121 malQ CDS
Automated Process Uncurated Go view Escherichia coli EC4113 (EHEC) BAY-0005300 malQ CDS
Automated Process Uncurated Go view Escherichia coli EC4115 (EHEC) BAS-0009557 malQ CDS
Automated Process Uncurated Go view Escherichia coli EC4196 (EHEC) BAX-0005385 malQ CDS
Automated Process Uncurated Go view Escherichia coli EC4206 (EHEC) BAW-0007372 malQ CDS
Automated Process Uncurated Go view Escherichia coli EC4401 (EHEC) BAV-0005154 malQ CDS
Automated Process Uncurated Go view Escherichia coli EC4486 (EHEC) BAU-0005223 malQ CDS
Automated Process Uncurated Go view Escherichia coli EC4501 (EHEC) BAT-0005064 malQ CDS
Automated Process Uncurated Go view Escherichia coli EC508 (EHEC) BBJ-0004950 malQ CDS
Automated Process Uncurated Go view Escherichia coli EC869 (EHEC) BBC-0005551 malQ CDS
Automated Process Uncurated Go view Escherichia coli EDL933 (EHEC) ABH-0028427 malQ CDS
Automated Process Uncurated Go view Escherichia coli F11 (UPEC) ADQ-0006526 malQ CDS
Automated Process Uncurated Go view Escherichia coli HS ADR-0008302 malQ CDS
Person Uncurated Go view Escherichia coli K-12 MG1655 ABE-0011151 malQ CDS
Automated Process Uncurated Go view Escherichia coli K-12 W3110 ADY-0003954 malQ CDS
Automated Process Uncurated Go view Escherichia coli SE11 AFS-0003754 CDS
Automated Process Uncurated Go view Escherichia coli SMS-3-5 AFT-0003694 malQ CDS
Automated Process Uncurated Go view Escherichia coli Sakai (EHEC) ACA-0134330 malQ CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0002607 CDS
Automated Process Uncurated Go view Escherichia coli UTI89 (UPEC) AEA-0003926 malQ CDS
Automated Process Uncurated Go view Pectobacterium atrosepticum SCRI1043 ABL-0064460 malQ CDS
Automated Process Uncurated Go view Pectobacterium brasiliensis 1692 AED-0002367 malQ CDS
Automated Process Uncurated Go view Pectobacterium carotovorum WPP14 ADT-0001109 malQ CDS
Automated Process Uncurated Go view Pectobacterium parmentieri WPP163 AFJ-0002513 malQ CDS
Automated Process Uncurated Go view Salmonella Agona SL483 BBX-0007882 malQ CDS
Automated Process Uncurated Go view Salmonella Arizonae CDC 346-86 BCD-0004294 CDS
Automated Process Uncurated Go view Salmonella Choleraesuis SC-B67 ADB-0004028 malQ CDS
Automated Process Uncurated Go view Salmonella Dublin CT_02021853 BCB-0008131 malQ CDS
Automated Process Uncurated Go view Salmonella Enteritidis P125109 BCF-0010939 malQ CDS
Automated Process Uncurated Go view Salmonella Gallinarum 287/91 BCG-0012014 malQ CDS
Automated Process Uncurated Go view Salmonella Hadar RI_05P066 BBT-0005360 malQ CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL476 BBV-0008179 malQ CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL486 BBW-0005529 malQ CDS
Automated Process Uncurated Go view Salmonella Javiana GA_MM04042433 BCA-0006262 malQ CDS
Automated Process Uncurated Go view Salmonella Kentucky CDC 191 BBZ-0007032 malQ CDS
Automated Process Uncurated Go view Salmonella Kentucky CVM29188 BBP-0007275 malQ CDS
Automated Process Uncurated Go view Salmonella Newport SL254 BBQ-0008142 malQ CDS
Automated Process Uncurated Go view Salmonella Newport SL317 BBR-0006713 malQ CDS
Automated Process Uncurated Go view Salmonella Paratyphi A AKU_12601 BCH-0003411 CDS
Automated Process Uncurated Go view Salmonella Paratyphi A ATCC 9150 ADA-0003377 malQ CDS
Automated Process Uncurated Go view Salmonella Paratyphi B SPB7 BCC-0004392 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA23 BBN-0008301 malQ CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA29 BBM-0004691 malQ CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund CVM19633 BBO-0007781 malQ CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund SL480 BBY-0004586 malQ CDS
Automated Process Uncurated Go view Salmonella Typhi CT18 ABX-0114022 malQ CDS
Automated Process Uncurated Go view Salmonella Typhi Ty2 ABS-0085719 malQ CDS
Automated Process Uncurated Go view Salmonella Typhimurium LT2 [T] ABU-0100870 malQ CDS
Automated Process Uncurated Go view Salmonella Virchow SL491 BBS-0005706 malQ CDS
Automated Process Uncurated Go view Salmonella Weltevreden SL484 BBU-0005131 malQ CDS
Automated Process Uncurated Go view Salmonella enterica CVM23701 BBL-0005096 malQ CDS
Automated Process Uncurated Go view Shigella boydii 227 ADV-0003718 malQ CDS
Automated Process Uncurated Go view Shigella boydii BS512 ADJ-0009216 malQ CDS
Automated Process Uncurated Go view Shigella dysenteriae 1012 BAA-0003489 malQ CDS
Automated Process Uncurated Go view Shigella dysenteriae 197 ADU-0004143 malQ CDS
Automated Process Uncurated Go view Shigella flexneri 2457T ABQ-0075633 malQ CDS
Automated Process Uncurated Go view Shigella flexneri 301 ABT-0089674 malQ CDS
Automated Process Uncurated Go view Shigella flexneri 8401 BAG-0003637 malQ CDS
Automated Process Uncurated Go view Shigella sonnei 046 ADD-0003863 malQ CDS
Automated Process Uncurated Go view Yersinia bercovieri ATCC 43970 [T] AEK-0003359 CDS
Automated Process Uncurated Go view Yersinia enterocolitica 8081 BAH-0011513 malQ CDS
Automated Process Uncurated Go view Yersinia frederiksenii ATCC 33641 [T] AEI-0001125 malQ CDS
Automated Process Uncurated Go view Yersinia intermedia ATCC 29909 [T] AEH-0001541 malQ CDS
Automated Process Uncurated Go view Yersinia mollaretii ATCC 43969 [T] AEJ-0003658 CDS
Automated Process Uncurated Go view Yersinia pestis 91001 (biovar Microtus) ACQ-0234513 malQ CDS
Automated Process Uncurated Go view Yersinia pestis Angola (biovar Pestoides) ADI-0007874 malQ CDS
Automated Process Uncurated Go view Yersinia pestis Antiqua (biovar Antiqua) BAE-0003991 malQ CDS
Automated Process Uncurated Go view Yersinia pestis B42003004 (biovar Antiqua) BAL-0008754 malQ CDS
Automated Process Uncurated Go view Yersinia pestis CA88-4125 (biovar Orientalis) BAF-0003161 malQ CDS
Automated Process Uncurated Go view Yersinia pestis CO92 (biovar Orientalis) ABY-0115725 malQ CDS
Automated Process Uncurated Go view Yersinia pestis E1979001 (biovar Antiqua) BAM-0006965 malQ CDS
Automated Process Uncurated Go view Yersinia pestis F1991016 (biovar Orientalis) BAQ-0008378 malQ CDS
Automated Process Uncurated Go view Yersinia pestis FV-1 (biovar Orientalis) BAK-0001341 CDS
Automated Process Uncurated Go view Yersinia pestis IP275 (biovar Orientalis) BAC-0005419 malQ CDS
Automated Process Uncurated Go view Yersinia pestis K1973002 (biovar Mediaevalis) BAO-0007819 malQ CDS
Automated Process Uncurated Go view Yersinia pestis KIM (biovar Mediaevalis) ABI-0033698 malQ CDS
Automated Process Uncurated Go view Yersinia pestis MG05-1020 (biovar Orientalis) BAP-0005013 malQ CDS
Automated Process Uncurated Go view Yersinia pestis Nepal516 (biovar Antiqua) BAD-0004719 malQ CDS
Automated Process Uncurated Go view Yersinia pestis Pestoides F (biovar Pestoides) BAI-0000062 CDS
Automated Process Uncurated Go view Yersinia pestis UG05-0454 (biovar Antiqua) BAN-0004510 malQ CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP31758 ADS-0008028 malQ CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP32953 ACZ-0003892 malQ CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis PB1/+ AFV-0004722 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis YPIII AFW-0000199 CDS
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 3638753 to 3650837
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
AEC-0000001sourceforward14686137Contains
AEC-0003177bioHCDScomplement36398413640611Downstream
AEC-0003178gntXCDSforward36406493641332Downstream
AEC-0003179gntYCDSforward36413913641966Downstream
AEC-0003180gntTCDSforward36423263643642Downstream
AEC-0003181malQCDScomplement36437533645837Matches
AEC-0003182malPCDScomplement36458473648240Upstream
AEC-0003183malTCDSforward36488523651557Upstream
Release Notes to toptop
submitted to GenBank; assigned accession number CP000948