Escherichia coli K-12 DH10B
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Working With: Genome: Escherichia coli K-12 DH10B Version: 10

AEC-0003188 (glpE) - Escherichia coli K-12 DH10B - Feature Annotation

ASAP ID
AEC-0003188 showshow history
Names
glpE ECDH10B_3599
Product
thiosulfate:cyanide sulfurtransferase (rhodanese)
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome complement 3657265 3657591 327 109
Sequence

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Context

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InterProScan
BLASTP
Protein Families to toptop
Author Approval Family Annotated
Automated Process Approved IPR001763 (IPR001763 Rhodanese-like domain) Jul 2009
Protein Domains to toptop
Internal error getting result
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Approved name glpE Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0011182
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Person Approved locus tag ECDH10B_3599 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu
Reference: Escherichia coli K-12 DH10B 		Feb 2008
Product
Person Approved product thiosulfate:cyanide sulfurtransferase (rhodanese) Published Annotation - PubMed ID: 16397293
Reference: Escherichia coli K-12 		Mar 2007
Protein Family
Automated Process Approved protein family IPR001763 Rhodanese-like domain Protein Sequence Similarity - InterPro Domain: IPR001763
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Other
Person Approved comment 100% identical to E. coli K-12 MG1655 feature ABE-0011182 Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0011182
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0000814 glpE CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0001156 glpE CDS
Ortholog
Automated Process Uncurated Go view Dickeya dadantii 3937 ABF-0015064 glpE CDS
Automated Process Uncurated Go view Erwinia tasmaniensis Et1/99 [T] AFI-0003350 glpE CDS
Automated Process Uncurated Go view Escherichia albertii TW07627 AFX-0001231 glpE CDS
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0004901 glpE CDS
Automated Process Uncurated Go view Escherichia coli 536 (UPEC) AEF-0003548 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0007671 glpE CDS
Automated Process Uncurated Go view Escherichia coli APEC O1 (APEC) AEG-0003466 glpE CDS
Automated Process Uncurated Go view Escherichia coli ATCC 8739 AEM-0005661 CDS
Automated Process Uncurated Go view Escherichia coli B171 (EPEC) ADN-0006445 glpE CDS
Automated Process Uncurated Go view Escherichia coli B7A (ETEC) ADK-0007570 glpE CDS
Automated Process Uncurated Go view Escherichia coli CFT073 (UPEC) ABR-0080378 glpE CDS
Automated Process Uncurated Go view Escherichia coli E110019 (EPEC) ADM-0007201 glpE CDS
Automated Process Uncurated Go view Escherichia coli E22 (EPEC) ADL-0005327 glpE CDS
Automated Process Uncurated Go view Escherichia coli E2348/69 (EPEC) BCI-0003906 glpE CDS
Automated Process Uncurated Go view Escherichia coli E24377A (ETEC) ADO-0008334 glpE CDS
Automated Process Uncurated Go view Escherichia coli EC4024 (EHEC) BBI-0004688 CDS
Automated Process Uncurated Go view Escherichia coli EC4042 (EHEC) BBA-0008072 glpE CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0006585 glpE CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0006131 glpE CDS
Automated Process Uncurated Go view Escherichia coli EC4113 (EHEC) BAY-0005290 glpE CDS
Automated Process Uncurated Go view Escherichia coli EC4115 (EHEC) BAS-0009567 glpE CDS
Automated Process Uncurated Go view Escherichia coli EC4196 (EHEC) BAX-0005375 glpE CDS
Automated Process Uncurated Go view Escherichia coli EC4206 (EHEC) BAW-0007382 glpE CDS
Automated Process Uncurated Go view Escherichia coli EC4401 (EHEC) BAV-0005164 glpE CDS
Automated Process Uncurated Go view Escherichia coli EC4486 (EHEC) BAU-0005233 glpE CDS
Automated Process Uncurated Go view Escherichia coli EC4501 (EHEC) BAT-0005074 glpE CDS
Automated Process Uncurated Go view Escherichia coli EC508 (EHEC) BBJ-0004960 glpE CDS
Automated Process Uncurated Go view Escherichia coli EC869 (EHEC) BBC-0005561 glpE CDS
Automated Process Uncurated Go view Escherichia coli EDL933 (EHEC) ABH-0028440 glpE CDS
Automated Process Uncurated Go view Escherichia coli F11 (UPEC) ADQ-0006517 glpE_1 CDS
Automated Process Uncurated Go view Escherichia coli HS ADR-0008310 glpE CDS
Person Uncurated Go view Escherichia coli K-12 MG1655 ABE-0011182 glpE CDS
Automated Process Uncurated Go view Escherichia coli K-12 W3110 ADY-0003946 glpE CDS
Automated Process Uncurated Go view Escherichia coli SE11 AFS-0003762 CDS
Automated Process Uncurated Go view Escherichia coli SMS-3-5 AFT-0003702 glpE CDS
Automated Process Uncurated Go view Escherichia coli Sakai (EHEC) ACA-0134340 glpE CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0002617 CDS
Automated Process Uncurated Go view Escherichia coli UTI89 (UPEC) AEA-0003934 glpE CDS
Automated Process Uncurated Go view Pectobacterium atrosepticum SCRI1043 ABL-0064464 glpE CDS
Automated Process Uncurated Go view Pectobacterium brasiliensis 1692 AED-0002776 glpE CDS
Automated Process Uncurated Go view Pectobacterium carotovorum WPP14 ADT-0003193 CDS
Automated Process Uncurated Go view Pectobacterium parmentieri WPP163 AFJ-0002521 glpE CDS
Automated Process Uncurated Go view Salmonella Agona SL483 BBX-0007893 CDS
Automated Process Uncurated Go view Salmonella Arizonae CDC 346-86 BCD-0004289 CDS
Automated Process Uncurated Go view Salmonella Choleraesuis SC-B67 ADB-0004039 glpE CDS
Automated Process Uncurated Go view Salmonella Dublin CT_02021853 BCB-0008143 CDS
Automated Process Uncurated Go view Salmonella Enteritidis P125109 BCF-0010975 glpE CDS
Automated Process Uncurated Go view Salmonella Gallinarum 287/91 BCG-0011981 glpE CDS
Automated Process Uncurated Go view Salmonella Hadar RI_05P066 BBT-0005355 CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL476 BBV-0008191 CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL486 BBW-0005541 CDS
Automated Process Uncurated Go view Salmonella Javiana GA_MM04042433 BCA-0006257 CDS
Automated Process Uncurated Go view Salmonella Kentucky CDC 191 BBZ-0007043 CDS
Automated Process Uncurated Go view Salmonella Kentucky CVM29188 BBP-0007286 CDS
Automated Process Uncurated Go view Salmonella Newport SL254 BBQ-0008147 CDS
Automated Process Uncurated Go view Salmonella Newport SL317 BBR-0006702 CDS
Automated Process Uncurated Go view Salmonella Paratyphi A AKU_12601 BCH-0003416 CDS
Automated Process Uncurated Go view Salmonella Paratyphi A ATCC 9150 ADA-0003382 glpE CDS
Automated Process Uncurated Go view Salmonella Paratyphi B SPB7 BCC-0004399 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA23 BBN-0008313 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA29 BBM-0004679 CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund CVM19633 BBO-0007786 CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund SL480 BBY-0004591 CDS
Automated Process Uncurated Go view Salmonella Typhi CT18 ABX-0114009 glpE CDS
Automated Process Uncurated Go view Salmonella Typhi Ty2 ABS-0085714 glpE CDS
Automated Process Uncurated Go view Salmonella Typhimurium LT2 [T] ABU-0100908 glpE CDS
Automated Process Uncurated Go view Salmonella Virchow SL491 BBS-0005701 CDS
Automated Process Uncurated Go view Salmonella Weltevreden SL484 BBU-0005121 CDS
Automated Process Uncurated Go view Salmonella enterica CVM23701 BBL-0005108 CDS
Automated Process Uncurated Go view Shigella boydii 227 ADV-0003726 glpE CDS
Automated Process Uncurated Go view Shigella boydii BS512 ADJ-0009226 glpE CDS
Automated Process Uncurated Go view Shigella dysenteriae 1012 BAA-0003480 glpE CDS
Automated Process Uncurated Go view Shigella dysenteriae 197 ADU-0004133 glpE CDS
Automated Process Uncurated Go view Shigella flexneri 2457T ABQ-0075624 glpE CDS
Automated Process Uncurated Go view Shigella flexneri 301 ABT-0089681 glpE CDS
Automated Process Uncurated Go view Shigella flexneri 8401 BAG-0003645 glpE CDS
Automated Process Uncurated Go view Shigella sonnei 046 ADD-0003994 glpE CDS
Automated Process Uncurated Go view Yersinia bercovieri ATCC 43970 [T] AEK-0003362 CDS
Automated Process Uncurated Go view Yersinia enterocolitica 8081 BAH-0011505 CDS
Automated Process Uncurated Go view Yersinia frederiksenii ATCC 33641 [T] AEI-0001128 glpE CDS
Automated Process Uncurated Go view Yersinia intermedia ATCC 29909 [T] AEH-0001538 glpE CDS
Automated Process Uncurated Go view Yersinia mollaretii ATCC 43969 [T] AEJ-0003655 CDS
Automated Process Uncurated Go view Yersinia pestis 91001 (biovar Microtus) ACQ-0234508 glpE CDS
Automated Process Uncurated Go view Yersinia pestis Angola (biovar Pestoides) ADI-0007878 glpE CDS
Automated Process Uncurated Go view Yersinia pestis Antiqua (biovar Antiqua) BAE-0003996 glpE CDS
Automated Process Uncurated Go view Yersinia pestis B42003004 (biovar Antiqua) BAL-0007413 glpE CDS
Automated Process Uncurated Go view Yersinia pestis CA88-4125 (biovar Orientalis) BAF-0003159 glpE CDS
Automated Process Uncurated Go view Yersinia pestis CO92 (biovar Orientalis) ABY-0115717 glpE CDS
Automated Process Uncurated Go view Yersinia pestis E1979001 (biovar Antiqua) BAM-0008767 glpE CDS
Automated Process Uncurated Go view Yersinia pestis F1991016 (biovar Orientalis) BAQ-0008374 glpE CDS
Automated Process Uncurated Go view Yersinia pestis FV-1 (biovar Orientalis) BAK-0001481 CDS
Automated Process Uncurated Go view Yersinia pestis IP275 (biovar Orientalis) BAC-0005423 glpE CDS
Automated Process Uncurated Go view Yersinia pestis K1973002 (biovar Mediaevalis) BAO-0007815 glpE CDS
Automated Process Uncurated Go view Yersinia pestis KIM (biovar Mediaevalis) ABI-0033695 glpE CDS
Automated Process Uncurated Go view Yersinia pestis MG05-1020 (biovar Orientalis) BAP-0005017 glpE CDS
Automated Process Uncurated Go view Yersinia pestis Nepal516 (biovar Antiqua) BAD-0004727 glpE CDS
Automated Process Uncurated Go view Yersinia pestis Pestoides F (biovar Pestoides) BAI-0000059 CDS
Automated Process Uncurated Go view Yersinia pestis UG05-0454 (biovar Antiqua) BAN-0004514 glpE CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP31758 ADS-0008031 glpE CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP32953 ACZ-0003895 glpE CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis PB1/+ AFV-0004726 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis YPIII AFW-0000196 CDS
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 3652265 to 3662591
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
AEC-0000001sourceforward14686137Contains
AEC-0004029rtcACDScomplement36516003652616Downstream
AEC-0003184rtcBCDScomplement36526203653846Downstream
AEC-0003185rtcRCDSforward36540353655633Downstream
AEC-0003186glpRCDScomplement36556153656373Downstream
AEC-0003187glpGCDScomplement36563903657220Downstream
AEC-0003188glpECDScomplement36572653657591Matches
AEC-0003189glpDCDSforward36577813659286Upstream
AEC-0004537pseudogenecomplement36595003659559Upstream
AEC-0003190yzgLpseudogenecomplement36595553659773Upstream
AEC-0003191glgPCDScomplement36599023662349Upstream
AEC-0003192glgACDScomplement36623683663801Upstream
Release Notes to toptop
submitted to GenBank; assigned accession number CP000948