Escherichia coli K-12 DH10B
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Working With: Genome: Escherichia coli K-12 DH10B Version: 10

AEC-0003263 (arsC) - Escherichia coli K-12 DH10B - Feature Annotation

ASAP ID
AEC-0003263 showshow history
Names
arsC ECDH10B_3679
Product
arsenate reductase
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome forward 3746005 3746430 426 142
Sequence

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Context

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InterProScan
BLASTP
Protein Families to toptop
Author Approval Family Annotated
Automated Process Approved IPR012335 (IPR012335 (DEPRECATED) Thioredoxin fold) Jul 2009
Automated Process Approved IPR006660 (IPR006660 Arsenate reductase-like) Jul 2009
Automated Process Approved IPR006659 (IPR006659 Arsenate reductase) Jul 2009
Automated Process Approved IPR012336 (IPR012336 Thioredoxin-like fold) Jul 2009
Protein Domains to toptop
Internal error getting result
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Approved name arsC Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0011439
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Person Approved locus tag ECDH10B_3679 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu
Reference: Escherichia coli K-12 DH10B 		Feb 2008
Product
Person Approved product arsenate reductase Published Annotation - PubMed ID: 16397293
Reference: Escherichia coli K-12 		Mar 2007
Protein Family
Automated Process Approved protein family IPR012336 Thioredoxin-like fold Protein Sequence Similarity - InterPro Domain: IPR012336
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR006659 Arsenate reductase Protein Sequence Similarity - InterPro Domain: IPR006659
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR006660 Arsenate reductase-like Protein Sequence Similarity - InterPro Domain: IPR006660
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR012335 (DEPRECATED) Thioredoxin fold Protein Sequence Similarity - InterPro Domain: IPR012335
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Other
Person Approved comment 100% identical to E. coli K-12 MG1655 feature ABE-0011439 Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0011439
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0002849 arsC CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0002480 arsC CDS
Ortholog
Automated Process Uncurated Go view Dickeya dadantii 3937 ABF-0016504 arsC CDS
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0004816 arsC2 CDS
Automated Process Uncurated Go view Escherichia coli 536 (UPEC) AEF-0003630 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0007581 arsC CDS
Automated Process Uncurated Go view Escherichia coli APEC O1 (APEC) AEG-0003556 arsC CDS
Automated Process Uncurated Go view Escherichia coli ATCC 8739 AEM-0005567 CDS
Automated Process Uncurated Go view Escherichia coli B171 (EPEC) ADN-0006535 arsC CDS
Automated Process Uncurated Go view Escherichia coli B7A (ETEC) ADK-0005360 CDS
Automated Process Uncurated Go view Escherichia coli CFT073 (UPEC) ABR-0080477 arsC CDS
Automated Process Uncurated Go view Escherichia coli E110019 (EPEC) ADM-0006820 arsC CDS
Automated Process Uncurated Go view Escherichia coli E22 (EPEC) ADL-0005234 arsC CDS
Automated Process Uncurated Go view Escherichia coli E2348/69 (EPEC) BCI-0003978 arsC CDS
Automated Process Uncurated Go view Escherichia coli E24377A (ETEC) ADO-0008419 arsC CDS
Automated Process Uncurated Go view Escherichia coli EC4024 (EHEC) BBI-0004807 CDS
Automated Process Uncurated Go view Escherichia coli EC4042 (EHEC) BBA-0008187 arsC2 CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0006701 arsC2 CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0006246 arsC2 CDS
Automated Process Uncurated Go view Escherichia coli EC4113 (EHEC) BAY-0005177 arsC2 CDS
Automated Process Uncurated Go view Escherichia coli EC4115 (EHEC) BAS-0009686 arsC2 CDS
Automated Process Uncurated Go view Escherichia coli EC4196 (EHEC) BAX-0005261 arsC2 CDS
Automated Process Uncurated Go view Escherichia coli EC4206 (EHEC) BAW-0007500 arsC2 CDS
Automated Process Uncurated Go view Escherichia coli EC4401 (EHEC) BAV-0005282 arsC2 CDS
Automated Process Uncurated Go view Escherichia coli EC4486 (EHEC) BAU-0005348 arsC2 CDS
Automated Process Uncurated Go view Escherichia coli EC4501 (EHEC) BAT-0005189 arsC2 CDS
Automated Process Uncurated Go view Escherichia coli EC508 (EHEC) BBJ-0005078 arsC2 CDS
Automated Process Uncurated Go view Escherichia coli EC869 (EHEC) BBC-0005676 arsC2 CDS
Automated Process Uncurated Go view Escherichia coli EDL933 (EHEC) ABH-0028553 arsC CDS
Automated Process Uncurated Go view Escherichia coli F11 (UPEC) ADQ-0005461 arsC_2 CDS
Automated Process Uncurated Go view Escherichia coli HS ADR-0008393 arsC2 CDS
Person Uncurated Go view Escherichia coli K-12 MG1655 ABE-0011439 arsC CDS
Automated Process Uncurated Go view Escherichia coli K-12 W3110 ADY-0003867 arsC CDS
Automated Process Uncurated Go view Escherichia coli SE11 AFS-0003840 CDS
Automated Process Uncurated Go view Escherichia coli SMS-3-5 AFT-0003792 arsC CDS
Automated Process Uncurated Go view Escherichia coli Sakai (EHEC) ACA-0134447 arsC CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0002730 CDS
Automated Process Uncurated Go view Escherichia coli UTI89 (UPEC) AEA-0004030 arsC CDS
Automated Process Uncurated Go view Pectobacterium atrosepticum SCRI1043 ABL-0061855 arsC CDS
Automated Process Uncurated Go view Pectobacterium carotovorum WPP14 ADT-0000409 arsC CDS
Automated Process Uncurated Go view Salmonella Arizonae CDC 346-86 BCD-0002008 CDS
Automated Process Uncurated Go view Salmonella Paratyphi B SPB7 BCC-0005444 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA29 BBM-0008766 arsC CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund CVM19633 BBO-0004808 arsC CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund SL480 BBY-0005890 arsC CDS
Automated Process Uncurated Go view Shigella boydii 227 ADV-0003822 arsC CDS
Automated Process Uncurated Go view Shigella boydii BS512 ADJ-0009237 arsC2 CDS
Automated Process Uncurated Go view Shigella dysenteriae 1012 BAA-0003362 arsC2 CDS
Automated Process Uncurated Go view Shigella dysenteriae 197 ADU-0004032 arsC CDS
Automated Process Uncurated Go view Shigella flexneri 2457T ABQ-0075528 arsC CDS
Automated Process Uncurated Go view Shigella flexneri 301 ABT-0089766 arsC CDS
Automated Process Uncurated Go view Shigella flexneri 8401 BAG-0003732 arsC CDS
Automated Process Uncurated Go view Shigella sonnei 046 ADD-0004073 arsC CDS
Automated Process Uncurated Go view Yersinia enterocolitica 8081 BAH-0010022 arsC2 CDS
Automated Process Uncurated Go view Yersinia frederiksenii ATCC 33641 [T] AEI-0001633 arsC2 CDS
Automated Process Uncurated Go view Yersinia intermedia ATCC 29909 [T] AEH-0000628 arsC2 CDS
Automated Process Uncurated Go view Yersinia mollaretii ATCC 43969 [T] AEJ-0000440 CDS
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 3741005 to 3751430
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
AEC-0000001sourceforward14686137Contains
AEC-0003259yhiRCDSforward37411533741995Upstream
AEC-0003260gorCDSforward37420673743419Upstream
AEC-0003261arsRCDSforward37442963744649Upstream
AEC-0003262arsBCDSforward37447033745992Upstream
AEC-0003263arsCCDSforward37460053746430Matches
AEC-0003264yhiSpseudogeneforward37470593747804(Interval #1) Downstream
AEC-0000051IS5.14repeat_regioncomplement37478043748998Downstream
AEC-0003265insH-11CDScomplement37479503748966Downstream
AEC-0003264yhiSpseudogeneforward37490043749481(Interval #2) Downstream
AEC-0003266slpCDSforward37497293750295Downstream
AEC-0003267yhiFCDSforward37504513750981Downstream
AEC-0003268yhiDCDScomplement37510233751670Downstream
Release Notes to toptop
submitted to GenBank; assigned accession number CP000948