Escherichia coli K-12 DH10B
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Working With: Genome: Escherichia coli K-12 DH10B Version: 10

AEC-0003310 (tiaE) - Escherichia coli K-12 DH10B - Feature Annotation

ASAP ID
AEC-0003310 showshow history
Names
tiaE ECDH10B_3732
Product
2-keto-D-gluconate reductase (glyoxalate reductase) (2-ketoaldonate reductase)
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome forward 3812910 3813884 975 325
Sequence

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Context

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Pre-Run Search Results
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InterProScan
BLASTP
Protein Families to toptop
Author Approval Family Annotated
Automated Process Approved IPR006140 (IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain) Jul 2009
Automated Process Approved IPR006139 (IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain) Jul 2009
Automated Process Approved IPR016040 (IPR016040 NAD(P)-binding domain) Jul 2009
Protein Domains to toptop
Internal error getting result
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Automated Process Approved GO biological process GO:0008152 metabolic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR006139
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0005488 binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR016040
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0003824 catalytic activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR016040
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0048037 (OBSOLETE) cofactor binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR006140
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR006140
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0051287 NAD binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR006139
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Approved name tiaE Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0011604
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Person Approved locus tag ECDH10B_3732 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu
Reference: Escherichia coli K-12 DH10B 		Feb 2008
Product
Person Approved product 2-keto-D-gluconate reductase (glyoxalate reductase) (2-ketoaldonate reductase) Published Annotation - PubMed ID: 16397293
Reference: Escherichia coli K-12 		Mar 2007
Protein Family
Automated Process Approved protein family IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain Protein Sequence Similarity - InterPro Domain: IPR006140
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Protein Sequence Similarity - InterPro Domain: IPR006139
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR016040 NAD(P)-binding domain Protein Sequence Similarity - InterPro Domain: IPR016040
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Other
Person Approved comment 100% identical to E. coli K-12 MG1655 feature ABE-0011604 Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0011604
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Gene Ontology
Automated Process Approved GO biological process GO:0008152 metabolic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR006139
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0048037 (OBSOLETE) cofactor binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR006140
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0051287 NAD binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR006139
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0003824 catalytic activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR016040
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0005488 binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR016040
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR006140
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0001457 ghrB CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0001578 ghrB CDS
Ortholog
Automated Process Uncurated Go view Dickeya dadantii 3937 ABF-0016151 tkrA CDS
Automated Process Uncurated Go view Erwinia tasmaniensis Et1/99 [T] AFI-0003550 tkrA CDS
Automated Process Uncurated Go view Escherichia albertii TW07627 AFX-0001252 tkrA CDS
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0004753 tkrA CDS
Automated Process Uncurated Go view Escherichia coli 536 (UPEC) AEF-0003695 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0007521 tkrA CDS
Automated Process Uncurated Go view Escherichia coli APEC O1 (APEC) AEG-0003615 tkrA CDS
Automated Process Uncurated Go view Escherichia coli ATCC 8739 AEM-0005504 CDS
Automated Process Uncurated Go view Escherichia coli B171 (EPEC) ADN-0006957 tkrA CDS
Automated Process Uncurated Go view Escherichia coli B7A (ETEC) ADK-0005299 CDS
Automated Process Uncurated Go view Escherichia coli CFT073 (UPEC) ABR-0080549 ghrB CDS
Automated Process Uncurated Go view Escherichia coli E110019 (EPEC) ADM-0006881 tkrA CDS
Automated Process Uncurated Go view Escherichia coli E22 (EPEC) ADL-0005166 tkrA CDS
Automated Process Uncurated Go view Escherichia coli E2348/69 (EPEC) BCI-0004049 ghrB CDS
Automated Process Uncurated Go view Escherichia coli E24377A (ETEC) ADO-0008482 tkrA CDS
Automated Process Uncurated Go view Escherichia coli EC4024 (EHEC) BBI-0004878 CDS
Automated Process Uncurated Go view Escherichia coli EC4042 (EHEC) BBA-0008260 tkrA CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0006775 tkrA CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0006322 tkrA CDS
Automated Process Uncurated Go view Escherichia coli EC4113 (EHEC) BAY-0005104 tkrA CDS
Automated Process Uncurated Go view Escherichia coli EC4115 (EHEC) BAS-0009763 tkrA CDS
Automated Process Uncurated Go view Escherichia coli EC4196 (EHEC) BAX-0005186 tkrA CDS
Automated Process Uncurated Go view Escherichia coli EC4206 (EHEC) BAW-0007575 tkrA CDS
Automated Process Uncurated Go view Escherichia coli EC4401 (EHEC) BAV-0005360 tkrA CDS
Automated Process Uncurated Go view Escherichia coli EC4486 (EHEC) BAU-0005425 tkrA CDS
Automated Process Uncurated Go view Escherichia coli EC4501 (EHEC) BAT-0005267 tkrA CDS
Automated Process Uncurated Go view Escherichia coli EC508 (EHEC) BBJ-0005154 tkrA CDS
Automated Process Uncurated Go view Escherichia coli EC869 (EHEC) BBC-0005753 tkrA CDS
Automated Process Uncurated Go view Escherichia coli EDL933 (EHEC) ABH-0028623 ghrB CDS
Automated Process Uncurated Go view Escherichia coli F11 (UPEC) ADQ-0005396 ghrB CDS
Automated Process Uncurated Go view Escherichia coli HS ADR-0008443 tkrA CDS
Person Uncurated Go view Escherichia coli K-12 MG1655 ABE-0011604 ghrB CDS
Automated Process Uncurated Go view Escherichia coli K-12 W3110 ADY-0003814 tiaE CDS
Automated Process Uncurated Go view Escherichia coli SE11 AFS-0003898 CDS
Automated Process Uncurated Go view Escherichia coli SMS-3-5 AFT-0003871 tkrA CDS
Automated Process Uncurated Go view Escherichia coli Sakai (EHEC) ACA-0134511 ghrB CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0002802 CDS
Automated Process Uncurated Go view Escherichia coli UTI89 (UPEC) AEA-0004102 yiaE CDS
Automated Process Uncurated Go view Pectobacterium atrosepticum SCRI1043 ABL-0060279 ghrB CDS
Automated Process Uncurated Go view Pectobacterium brasiliensis 1692 AED-0000051 tkrA CDS
Automated Process Uncurated Go view Pectobacterium carotovorum WPP14 ADT-0000025 tkrA CDS
Automated Process Uncurated Go view Pectobacterium parmentieri WPP163 AFJ-0000186 ghrB CDS
Automated Process Uncurated Go view Salmonella Agona SL483 BBX-0008027 CDS
Automated Process Uncurated Go view Salmonella Choleraesuis SC-B67 ADB-0004183 ghrB CDS
Automated Process Uncurated Go view Salmonella Dublin CT_02021853 BCB-0008276 CDS
Automated Process Uncurated Go view Salmonella Enteritidis P125109 BCF-0011410 yiaE CDS
Automated Process Uncurated Go view Salmonella Gallinarum 287/91 BCG-0011564 yiaE CDS
Automated Process Uncurated Go view Salmonella Hadar RI_05P066 BBT-0005221 CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL476 BBV-0008327 CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL486 BBW-0005676 CDS
Automated Process Uncurated Go view Salmonella Javiana GA_MM04042433 BCA-0006132 CDS
Automated Process Uncurated Go view Salmonella Kentucky CDC 191 BBZ-0006879 CDS
Automated Process Uncurated Go view Salmonella Kentucky CVM29188 BBP-0007423 CDS
Automated Process Uncurated Go view Salmonella Newport SL254 BBQ-0008280 CDS
Automated Process Uncurated Go view Salmonella Newport SL317 BBR-0006569 CDS
Automated Process Uncurated Go view Salmonella Paratyphi A AKU_12601 BCH-0003533 CDS
Automated Process Uncurated Go view Salmonella Paratyphi A ATCC 9150 ADA-0003497 ghrB CDS
Automated Process Uncurated Go view Salmonella Paratyphi B SPB7 BCC-0004550 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA23 BBN-0008448 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA29 BBM-0004545 CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund CVM19633 BBO-0007910 CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund SL480 BBY-0004716 CDS
Automated Process Uncurated Go view Salmonella Typhi CT18 ABX-0113728 ghrB CDS
Automated Process Uncurated Go view Salmonella Typhi Ty2 ABS-0085599 ghrB CDS
Automated Process Uncurated Go view Salmonella Typhimurium LT2 [T] ABU-0101278 ghrB CDS
Automated Process Uncurated Go view Salmonella Virchow SL491 BBS-0005569 CDS
Automated Process Uncurated Go view Salmonella Weltevreden SL484 BBU-0004992 CDS
Automated Process Uncurated Go view Salmonella enterica CVM23701 BBL-0005244 CDS
Automated Process Uncurated Go view Shigella boydii 227 ADV-0003878 yiaE CDS
Automated Process Uncurated Go view Shigella boydii BS512 ADJ-0009394 tkrA CDS
Automated Process Uncurated Go view Shigella dysenteriae 1012 BAA-0003403 tkrA CDS
Automated Process Uncurated Go view Shigella dysenteriae 197 ADU-0004916 yiaE CDS
Automated Process Uncurated Go view Shigella flexneri 2457T ABQ-0075469 ghrB CDS
Automated Process Uncurated Go view Shigella flexneri 301 ABT-0089813 ghrB CDS
Automated Process Uncurated Go view Shigella flexneri 8401 BAG-0003754 yiaE CDS
Automated Process Uncurated Go view Shigella sonnei 046 ADD-0004179 ghrB CDS
Automated Process Uncurated Go view Yersinia bercovieri ATCC 43970 [T] AEK-0000203 CDS
Automated Process Uncurated Go view Yersinia enterocolitica 8081 BAH-0011989 CDS
Automated Process Uncurated Go view Yersinia frederiksenii ATCC 33641 [T] AEI-0002396 ghrB_1 CDS
Automated Process Uncurated Go view Yersinia intermedia ATCC 29909 [T] AEH-0002087 ghrB CDS
Automated Process Uncurated Go view Yersinia mollaretii ATCC 43969 [T] AEJ-0003557 CDS
Automated Process Uncurated Go view Yersinia pestis 91001 (biovar Microtus) ACQ-0243867 ghrB CDS
Automated Process Uncurated Go view Yersinia pestis Angola (biovar Pestoides) ADI-0007912 tkrA CDS
Automated Process Uncurated Go view Yersinia pestis Antiqua (biovar Antiqua) BAE-0003599 ghrB CDS
Automated Process Uncurated Go view Yersinia pestis B42003004 (biovar Antiqua) BAL-0007218 tkrA CDS
Automated Process Uncurated Go view Yersinia pestis CA88-4125 (biovar Orientalis) BAF-0003334 CDS
Automated Process Uncurated Go view Yersinia pestis CO92 (biovar Orientalis) ABY-0129063 ghrB CDS
Automated Process Uncurated Go view Yersinia pestis E1979001 (biovar Antiqua) BAM-0005782 tkrA CDS
Automated Process Uncurated Go view Yersinia pestis F1991016 (biovar Orientalis) BAQ-0006385 tkrA CDS
Automated Process Uncurated Go view Yersinia pestis FV-1 (biovar Orientalis) BAK-0002991 CDS
Automated Process Uncurated Go view Yersinia pestis IP275 (biovar Orientalis) BAC-0006192 tkrA CDS
Automated Process Uncurated Go view Yersinia pestis K1973002 (biovar Mediaevalis) BAO-0006664 tkrA CDS
Automated Process Uncurated Go view Yersinia pestis KIM (biovar Mediaevalis) ABI-0033896 ghrB CDS
Automated Process Uncurated Go view Yersinia pestis MG05-1020 (biovar Orientalis) BAP-0006676 tkrA CDS
Automated Process Uncurated Go view Yersinia pestis Nepal516 (biovar Antiqua) BAD-0004476 ghrB CDS
Automated Process Uncurated Go view Yersinia pestis Pestoides F (biovar Pestoides) BAI-0000020 CDS
Automated Process Uncurated Go view Yersinia pestis UG05-0454 (biovar Antiqua) BAN-0004945 tkrA CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP31758 ADS-0008176 tkrA CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP32953 ACZ-0004030 ghrB CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis PB1/+ AFV-0004909 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis YPIII AFW-0000020 CDS
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 3807910 to 3818884
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
AEC-0000001sourceforward14686137Contains
AEC-0003305yhjYCDScomplement38078363808534Upstream
AEC-0003306tagCDSforward38086923809255Upstream
AEC-0003307yiaCCDSforward38092523809692Upstream
AEC-0003308bisCCDScomplement38096613811994Upstream
AEC-0003309yiaDCDSforward38121473812806Upstream
AEC-0003310tiaECDSforward38129103813884Matches
AEC-0003311yiaFCDScomplement38139343814644Downstream
AEC-0003312yiaGCDSforward38150783815368Downstream
AEC-0003313cspACDSforward38156493815861Downstream
AEC-0004018hokACDScomplement38160483816200Downstream
AEC-0004545mokApseudogenecomplement38160483816232Downstream
AEC-0000052IS150.2repeat_regionforward38162333817675Downstream
AEC-0003314insJCDSforward38162803816801Downstream
AEC-0003315insKCDSforward38167983817649Downstream
AEC-0004544sokAncRNAforward38176773817705Downstream
AEC-0003316glySCDScomplement38179283819997Downstream
Release Notes to toptop
submitted to GenBank; assigned accession number CP000948