Escherichia coli K-12 DH10B
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Working With: Genome: Escherichia coli K-12 DH10B Version: 10

AEC-0003353 (mtlA) - Escherichia coli K-12 DH10B - Feature Annotation

ASAP ID
AEC-0003353 showshow history
Names
mtlA ECDH10B_3780
Product
fused mannitol-specific PTS enzymes: IIA components; IIB components; IIC components
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome forward 3867881 3869794 1914 638
Sequence

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Context

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Pre-Run Search Results
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InterProScan
BLASTP
Protein Families to toptop
Author Approval Family Annotated
Automated Process Approved IPR002178 (IPR002178 PTS EIIA type-2 domain) Jul 2009
Automated Process Approved IPR013011 (IPR013011 Phosphotransferase system, EIIB component, type 2) Jul 2009
Automated Process Approved IPR013014 (IPR013014 Phosphotransferase system, EIIC component, type 2) Jul 2009
Automated Process Approved IPR003352 (IPR003352 Phosphotransferase system, EIIC) Jul 2009
Automated Process Approved IPR003501 (IPR003501 Phosphotransferase system, EIIB component, type 2/3) Jul 2009
Automated Process Approved IPR004718 (IPR004718 Phosphotransferase system, mannitol-specific enzyme IIC) Jul 2009
Automated Process Approved IPR016152 (IPR016152 Phosphotransferase/anion transporter) Jul 2009
Protein Domains to toptop
Internal error getting result
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Automated Process Approved GO biological process GO:0006810 transport GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR002178
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO biological process GO:0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR002178
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0005215 transporter activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR016152
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0005351 carbohydrate:proton symporter activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR002178
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Approved name mtlA Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0011761
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Person Approved locus tag ECDH10B_3780 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu
Reference: Escherichia coli K-12 DH10B 		Feb 2008
Product
Person Approved product fused mannitol-specific PTS enzymes: IIA components; IIB components; IIC components Published Annotation - PubMed ID: 16397293
Reference: Escherichia coli K-12 		Mar 2007
Protein Family
Automated Process Approved protein family IPR003352 Phosphotransferase system, EIIC Protein Sequence Similarity - InterPro Domain: IPR003352
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR013014 Phosphotransferase system, EIIC component, type 2 Protein Sequence Similarity - InterPro Domain: IPR013014
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR003501 Phosphotransferase system, EIIB component, type 2/3 Protein Sequence Similarity - InterPro Domain: IPR003501
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR004718 Phosphotransferase system, mannitol-specific enzyme IIC Protein Sequence Similarity - InterPro Domain: IPR004718
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR016152 Phosphotransferase/anion transporter Protein Sequence Similarity - InterPro Domain: IPR016152
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR013011 Phosphotransferase system, EIIB component, type 2 Protein Sequence Similarity - InterPro Domain: IPR013011
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR002178 PTS EIIA type-2 domain Protein Sequence Similarity - InterPro Domain: IPR002178
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Other
Person Approved comment 100% identical to E. coli K-12 MG1655 feature ABE-0011761 Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0011761
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Gene Ontology
Automated Process Approved GO biological process GO:0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR002178
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO biological process GO:0006810 transport GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR002178
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0005351 carbohydrate:proton symporter activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR002178
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0005215 transporter activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR016152
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0001645 mtlA CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0001851 mtlA CDS
Ortholog
Automated Process Uncurated Go view Dickeya dadantii 3937 ABF-0016119 mtlA CDS
Automated Process Uncurated Go view Erwinia tasmaniensis Et1/99 [T] AFI-0003527 mtlA CDS
Automated Process Uncurated Go view Escherichia albertii TW07627 AFX-0001465 mtlA CDS
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0004702 mtlA CDS
Automated Process Uncurated Go view Escherichia coli 536 (UPEC) AEF-0003736 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0007470 mtlA CDS
Automated Process Uncurated Go view Escherichia coli APEC O1 (APEC) AEG-0003654 mtlA CDS
Automated Process Uncurated Go view Escherichia coli ATCC 8739 AEM-0005445 CDS
Automated Process Uncurated Go view Escherichia coli B171 (EPEC) ADN-0007008 mtlA CDS
Automated Process Uncurated Go view Escherichia coli B7A (ETEC) ADK-0008502 CDS
Automated Process Uncurated Go view Escherichia coli CFT073 (UPEC) ABR-0080593 mtlA CDS
Automated Process Uncurated Go view Escherichia coli E110019 (EPEC) ADM-0006933 mtlA CDS
Automated Process Uncurated Go view Escherichia coli E22 (EPEC) ADL-0010050 mtlA CDS
Automated Process Uncurated Go view Escherichia coli E2348/69 (EPEC) BCI-0004089 mtlA CDS
Automated Process Uncurated Go view Escherichia coli E24377A (ETEC) ADO-0008530 mtlA CDS
Automated Process Uncurated Go view Escherichia coli EC4024 (EHEC) BBI-0004921 CDS
Automated Process Uncurated Go view Escherichia coli EC4042 (EHEC) BBA-0008300 mtlA CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0006814 mtlA CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0006364 mtlA CDS
Automated Process Uncurated Go view Escherichia coli EC4113 (EHEC) BAY-0005061 mtlA CDS
Automated Process Uncurated Go view Escherichia coli EC4115 (EHEC) BAS-0009803 mtlA CDS
Automated Process Uncurated Go view Escherichia coli EC4196 (EHEC) BAX-0005144 mtlA CDS
Automated Process Uncurated Go view Escherichia coli EC4206 (EHEC) BAW-0007615 mtlA CDS
Automated Process Uncurated Go view Escherichia coli EC4401 (EHEC) BAV-0005401 mtlA CDS
Automated Process Uncurated Go view Escherichia coli EC4486 (EHEC) BAU-0005467 mtlA CDS
Automated Process Uncurated Go view Escherichia coli EC4501 (EHEC) BAT-0005309 mtlA CDS
Automated Process Uncurated Go view Escherichia coli EC508 (EHEC) BBJ-0005195 mtlA CDS
Automated Process Uncurated Go view Escherichia coli EC869 (EHEC) BBC-0005794 mtlA CDS
Automated Process Uncurated Go view Escherichia coli EDL933 (EHEC) ABH-0028666 mtlA CDS
Automated Process Uncurated Go view Escherichia coli F11 (UPEC) ADQ-0005356 mtlA_2 CDS
Automated Process Uncurated Go view Escherichia coli HS ADR-0008494 mtlA CDS
Person Uncurated Go view Escherichia coli K-12 MG1655 ABE-0011761 mtlA CDS
Automated Process Uncurated Go view Escherichia coli K-12 W3110 ADY-0003766 mtlA CDS
Automated Process Uncurated Go view Escherichia coli SE11 AFS-0003949 CDS
Automated Process Uncurated Go view Escherichia coli SMS-3-5 AFT-0003929 mtlA CDS
Automated Process Uncurated Go view Escherichia coli Sakai (EHEC) ACA-0134549 mtlA CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0002844 CDS
Automated Process Uncurated Go view Escherichia coli UTI89 (UPEC) AEA-0004146 mtlA CDS
Automated Process Uncurated Go view Pectobacterium atrosepticum SCRI1043 ABL-0060288 mtlA CDS
Automated Process Uncurated Go view Pectobacterium brasiliensis 1692 AED-0000054 mtlA CDS
Automated Process Uncurated Go view Pectobacterium carotovorum WPP14 ADT-0001231 mtlA CDS
Automated Process Uncurated Go view Pectobacterium parmentieri WPP163 AFJ-0000195 mtlA CDS
Automated Process Uncurated Go view Salmonella Agona SL483 BBX-0008068 CDS
Automated Process Uncurated Go view Salmonella Arizonae CDC 346-86 BCD-0004147 CDS
Automated Process Uncurated Go view Salmonella Choleraesuis SC-B67 ADB-0004222 mtlA CDS
Automated Process Uncurated Go view Salmonella Dublin CT_02021853 BCB-0008317 CDS
Automated Process Uncurated Go view Salmonella Enteritidis P125109 BCF-0011525 mtlA CDS
Automated Process Uncurated Go view Salmonella Gallinarum 287/91 BCG-0011452 mtlA CDS
Automated Process Uncurated Go view Salmonella Hadar RI_05P066 BBT-0005179 CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL476 BBV-0008366 CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL486 BBW-0005715 CDS
Automated Process Uncurated Go view Salmonella Javiana GA_MM04042433 BCA-0006085 mtlA CDS
Automated Process Uncurated Go view Salmonella Kentucky CDC 191 BBZ-0006916 CDS
Automated Process Uncurated Go view Salmonella Kentucky CVM29188 BBP-0007461 CDS
Automated Process Uncurated Go view Salmonella Newport SL254 BBQ-0008318 CDS
Automated Process Uncurated Go view Salmonella Newport SL317 BBR-0006527 CDS
Automated Process Uncurated Go view Salmonella Paratyphi A AKU_12601 BCH-0003573 CDS
Automated Process Uncurated Go view Salmonella Paratyphi A ATCC 9150 ADA-0003535 mtlA CDS
Automated Process Uncurated Go view Salmonella Paratyphi B SPB7 BCC-0004597 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA23 BBN-0008490 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA29 BBM-0004502 CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund CVM19633 BBO-0007953 CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund SL480 BBY-0004759 CDS
Automated Process Uncurated Go view Salmonella Typhi CT18 ABX-0113619 mtlA CDS
Automated Process Uncurated Go view Salmonella Typhi Ty2 ABS-0085560 mtlA CDS
Automated Process Uncurated Go view Salmonella Typhimurium LT2 [T] ABU-0101408 mtlA CDS
Automated Process Uncurated Go view Salmonella Virchow SL491 BBS-0005523 CDS
Automated Process Uncurated Go view Salmonella Weltevreden SL484 BBU-0004949 CDS
Automated Process Uncurated Go view Salmonella enterica CVM23701 BBL-0005284 CDS
Automated Process Uncurated Go view Shigella boydii 227 ADV-0003925 mtlA CDS
Automated Process Uncurated Go view Shigella boydii BS512 ADJ-0009437 mtlA CDS
Automated Process Uncurated Go view Shigella flexneri 2457T ABQ-0075415 mtlA CDS
Automated Process Uncurated Go view Shigella flexneri 301 ABT-0089855 mtlA CDS
Automated Process Uncurated Go view Shigella flexneri 8401 BAG-0004187 mtlA CDS
Automated Process Uncurated Go view Shigella sonnei 046 ADD-0004150 mtlA CDS
Automated Process Uncurated Go view Yersinia bercovieri ATCC 43970 [T] AEK-0000190 CDS
Automated Process Uncurated Go view Yersinia enterocolitica 8081 BAH-0011959 mtlA CDS
Automated Process Uncurated Go view Yersinia frederiksenii ATCC 33641 [T] AEI-0002385 mtlA_1 CDS
Automated Process Uncurated Go view Yersinia intermedia ATCC 29909 [T] AEH-0002098 mtlA CDS
Automated Process Uncurated Go view Yersinia mollaretii ATCC 43969 [T] AEJ-0003021 CDS
Automated Process Uncurated Go view Yersinia pestis 91001 (biovar Microtus) ACQ-0243841 mtlA CDS
Automated Process Uncurated Go view Yersinia pestis Angola (biovar Pestoides) ADI-0007903 mtlA CDS
Automated Process Uncurated Go view Yersinia pestis Antiqua (biovar Antiqua) BAE-0003609 mtlA CDS
Automated Process Uncurated Go view Yersinia pestis B42003004 (biovar Antiqua) BAL-0007227 mtlA CDS
Automated Process Uncurated Go view Yersinia pestis CA88-4125 (biovar Orientalis) BAF-0003342 mtlA CDS
Automated Process Uncurated Go view Yersinia pestis CO92 (biovar Orientalis) ABY-0129032 mtlA CDS
Automated Process Uncurated Go view Yersinia pestis E1979001 (biovar Antiqua) BAM-0005791 mtlA CDS
Automated Process Uncurated Go view Yersinia pestis F1991016 (biovar Orientalis) BAQ-0006393 mtlA CDS
Automated Process Uncurated Go view Yersinia pestis IP275 (biovar Orientalis) BAC-0006183 mtlA CDS
Automated Process Uncurated Go view Yersinia pestis K1973002 (biovar Mediaevalis) BAO-0006673 mtlA CDS
Automated Process Uncurated Go view Yersinia pestis KIM (biovar Mediaevalis) ABI-0033887 mtlA CDS
Automated Process Uncurated Go view Yersinia pestis MG05-1020 (biovar Orientalis) BAP-0006685 mtlA CDS
Automated Process Uncurated Go view Yersinia pestis Nepal516 (biovar Antiqua) BAD-0004466 mtlA CDS
Automated Process Uncurated Go view Yersinia pestis Pestoides F (biovar Pestoides) BAI-0000030 CDS
Automated Process Uncurated Go view Yersinia pestis UG05-0454 (biovar Antiqua) BAN-0004937 mtlA CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP31758 ADS-0008167 mtlA CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP32953 ACZ-0004038 mtlA CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis PB1/+ AFV-0004922 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis YPIII AFW-0000031 CDS
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 3862881 to 3874794
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
AEC-0000001sourceforward14686137Contains
AEC-0003349yibJCDSforward38628213863522Upstream
AEC-0003350yibGCDSforward38637773864238Upstream
AEC-0004546yibVpseudogeneforward38649453865383Upstream
AEC-0003351yibHCDScomplement38658433866979Upstream
AEC-0003352yibICDScomplement38669823867344Upstream
AEC-0003353mtlACDSforward38678813869794Matches
AEC-0003354mtlDCDSforward38700243871172Downstream
AEC-0003355mtlRCDSforward38711723871759Downstream
AEC-0004095yibTCDScomplement38717713871980Downstream
AEC-0003356yibLCDSforward38722653872627Downstream
AEC-0003357lldPCDSforward38729993874654Downstream
AEC-0003358lldRCDSforward38746543875430Downstream
Release Notes to toptop
submitted to GenBank; assigned accession number CP000948