Escherichia coli K-12 DH10B
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Working With: Genome: Escherichia coli K-12 DH10B Version: 10

AEC-0003354 (mtlD) - Escherichia coli K-12 DH10B - Feature Annotation

ASAP ID
AEC-0003354 showshow history
Names
mtlD ECDH10B_3781
Product
mannitol-1-phosphate dehydrogenase, NAD(P)-binding
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome forward 3870024 3871172 1149 383
Sequence

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View sequence with flanking regions: bases upstream and bases downstream

Context

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Pre-Run Search Results
Search Database View Results
InterProScan
BLASTP
Protein Families to toptop
Author Approval Family Annotated
Automated Process Approved IPR000669 (IPR000669 Mannitol dehydrogenase) Jul 2009
Automated Process Approved IPR013131 (IPR013131 Mannitol dehydrogenase, N-terminal) Jul 2009
Automated Process Approved IPR013118 (IPR013118 Mannitol dehydrogenase, C-terminal) Jul 2009
Automated Process Approved IPR016040 (IPR016040 NAD(P)-binding domain) Jul 2009
Automated Process Approved IPR013328 (IPR013328 6-phosphogluconate dehydrogenase, domain 2) Jul 2009
Automated Process Approved IPR008927 (IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily) Jul 2009
Protein Domains to toptop
Internal error getting result
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Automated Process Approved GO biological process GO:0008152 metabolic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR000669
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0005488 binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR016040
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0050662 (OBSOLETE) coenzyme binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR013118
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0016491 oxidoreductase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR013131
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0003824 catalytic activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR000669
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Approved name mtlD Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0011767
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Person Approved locus tag ECDH10B_3781 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu
Reference: Escherichia coli K-12 DH10B 		Feb 2008
Product
Person Approved product mannitol-1-phosphate dehydrogenase, NAD(P)-binding Published Annotation - PubMed ID: 16397293
Reference: Escherichia coli K-12 		Mar 2007
Protein Family
Automated Process Approved protein family IPR013131 Mannitol dehydrogenase, N-terminal Protein Sequence Similarity - InterPro Domain: IPR013131
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR013118 Mannitol dehydrogenase, C-terminal Protein Sequence Similarity - InterPro Domain: IPR013118
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily Protein Sequence Similarity - InterPro Domain: IPR008927
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR013328 6-phosphogluconate dehydrogenase, domain 2 Protein Sequence Similarity - InterPro Domain: IPR013328
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR016040 NAD(P)-binding domain Protein Sequence Similarity - InterPro Domain: IPR016040
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR000669 Mannitol dehydrogenase Protein Sequence Similarity - InterPro Domain: IPR000669
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Other
Person Approved comment 100% identical to E. coli K-12 MG1655 feature ABE-0011767 Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0011767
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Gene Ontology
Automated Process Approved GO biological process GO:0008152 metabolic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR000669
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0003824 catalytic activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR000669
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0016491 oxidoreductase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR013131
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0050662 (OBSOLETE) coenzyme binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR013118
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0005488 binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR016040
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0001644 mtlD CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0001858 mtlD CDS
Ortholog
Automated Process Uncurated Go view Dickeya dadantii 3937 ABF-0016117 mtlD CDS
Automated Process Uncurated Go view Erwinia tasmaniensis Et1/99 [T] AFI-0003528 mtlD CDS
Automated Process Uncurated Go view Escherichia albertii TW07627 AFX-0001466 mtlD CDS
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0004701 mtlD CDS
Automated Process Uncurated Go view Escherichia coli 536 (UPEC) AEF-0003737 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0007469 mtlD CDS
Automated Process Uncurated Go view Escherichia coli APEC O1 (APEC) AEG-0003655 mtlD CDS
Automated Process Uncurated Go view Escherichia coli ATCC 8739 AEM-0005444 CDS
Automated Process Uncurated Go view Escherichia coli B171 (EPEC) ADN-0007009 mtlD CDS
Automated Process Uncurated Go view Escherichia coli B7A (ETEC) ADK-0008503 CDS
Automated Process Uncurated Go view Escherichia coli CFT073 (UPEC) ABR-0080594 mtlD CDS
Automated Process Uncurated Go view Escherichia coli E110019 (EPEC) ADM-0006934 mtlD CDS
Automated Process Uncurated Go view Escherichia coli E22 (EPEC) ADL-0010051 mtlD CDS
Automated Process Uncurated Go view Escherichia coli E2348/69 (EPEC) BCI-0004090 mtlD CDS
Automated Process Uncurated Go view Escherichia coli E24377A (ETEC) ADO-0008531 mtlD CDS
Automated Process Uncurated Go view Escherichia coli EC4024 (EHEC) BBI-0004922 CDS
Automated Process Uncurated Go view Escherichia coli EC4042 (EHEC) BBA-0008301 mtlD CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0006815 mtlD CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0006365 mtlD CDS
Automated Process Uncurated Go view Escherichia coli EC4113 (EHEC) BAY-0005060 mtlD CDS
Automated Process Uncurated Go view Escherichia coli EC4115 (EHEC) BAS-0009804 mtlD CDS
Automated Process Uncurated Go view Escherichia coli EC4196 (EHEC) BAX-0005143 mtlD CDS
Automated Process Uncurated Go view Escherichia coli EC4206 (EHEC) BAW-0007616 mtlD CDS
Automated Process Uncurated Go view Escherichia coli EC4401 (EHEC) BAV-0005402 mtlD CDS
Automated Process Uncurated Go view Escherichia coli EC4486 (EHEC) BAU-0005468 mtlD CDS
Automated Process Uncurated Go view Escherichia coli EC4501 (EHEC) BAT-0005310 mtlD CDS
Automated Process Uncurated Go view Escherichia coli EC508 (EHEC) BBJ-0005196 mtlD CDS
Automated Process Uncurated Go view Escherichia coli EC869 (EHEC) BBC-0005795 mtlD CDS
Automated Process Uncurated Go view Escherichia coli EDL933 (EHEC) ABH-0028667 mtlD CDS
Automated Process Uncurated Go view Escherichia coli F11 (UPEC) ADQ-0005354 mtlD CDS
Automated Process Uncurated Go view Escherichia coli HS ADR-0008495 mtlD CDS
Person Uncurated Go view Escherichia coli K-12 MG1655 ABE-0011767 mtlD CDS
Automated Process Uncurated Go view Escherichia coli K-12 W3110 ADY-0003765 mtlD CDS
Automated Process Uncurated Go view Escherichia coli SE11 AFS-0003951 CDS
Automated Process Uncurated Go view Escherichia coli SMS-3-5 AFT-0003930 mtlD CDS
Automated Process Uncurated Go view Escherichia coli Sakai (EHEC) ACA-0134550 mtlD CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0002845 CDS
Automated Process Uncurated Go view Escherichia coli UTI89 (UPEC) AEA-0004147 mtlD CDS
Automated Process Uncurated Go view Pectobacterium atrosepticum SCRI1043 ABL-0060289 mtlD CDS
Automated Process Uncurated Go view Pectobacterium brasiliensis 1692 AED-0000053 mtlD CDS
Automated Process Uncurated Go view Pectobacterium carotovorum WPP14 ADT-0001232 mtlD CDS
Automated Process Uncurated Go view Pectobacterium parmentieri WPP163 AFJ-0000196 mtlD CDS
Automated Process Uncurated Go view Salmonella Agona SL483 BBX-0008069 mtlD CDS
Automated Process Uncurated Go view Salmonella Arizonae CDC 346-86 BCD-0004146 CDS
Automated Process Uncurated Go view Salmonella Choleraesuis SC-B67 ADB-0004224 mtlD CDS
Automated Process Uncurated Go view Salmonella Dublin CT_02021853 BCB-0008318 mtlD CDS
Automated Process Uncurated Go view Salmonella Enteritidis P125109 BCF-0011531 mtlD CDS
Automated Process Uncurated Go view Salmonella Gallinarum 287/91 BCG-0011448 mtlD CDS
Automated Process Uncurated Go view Salmonella Hadar RI_05P066 BBT-0005178 mtlD CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL476 BBV-0008367 mtlD CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL486 BBW-0005716 mtlD CDS
Automated Process Uncurated Go view Salmonella Javiana GA_MM04042433 BCA-0006084 mtlD CDS
Automated Process Uncurated Go view Salmonella Kentucky CDC 191 BBZ-0006917 mtlD CDS
Automated Process Uncurated Go view Salmonella Kentucky CVM29188 BBP-0007462 mtlD CDS
Automated Process Uncurated Go view Salmonella Newport SL254 BBQ-0008319 mtlD CDS
Automated Process Uncurated Go view Salmonella Newport SL317 BBR-0006526 mtlD CDS
Automated Process Uncurated Go view Salmonella Paratyphi A AKU_12601 BCH-0003574 CDS
Automated Process Uncurated Go view Salmonella Paratyphi A ATCC 9150 ADA-0003537 mtlD CDS
Automated Process Uncurated Go view Salmonella Paratyphi B SPB7 BCC-0004598 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA23 BBN-0008491 mtlD CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA29 BBM-0004501 mtlD CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund CVM19633 BBO-0007954 mtlD CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund SL480 BBY-0004760 mtlD CDS
Automated Process Uncurated Go view Salmonella Typhi CT18 ABX-0113616 mtlD CDS
Automated Process Uncurated Go view Salmonella Typhi Ty2 ABS-0085559 mtlD CDS
Automated Process Uncurated Go view Salmonella Typhimurium LT2 [T] ABU-0101411 mtlD CDS
Automated Process Uncurated Go view Salmonella Virchow SL491 BBS-0005522 mtlD CDS
Automated Process Uncurated Go view Salmonella Weltevreden SL484 BBU-0004948 mtlD CDS
Automated Process Uncurated Go view Shigella boydii 227 ADV-0003926 mtlD CDS
Automated Process Uncurated Go view Shigella boydii BS512 ADJ-0009438 mtlD CDS
Automated Process Uncurated Go view Shigella flexneri 2457T ABQ-0075413 mtlD CDS
Automated Process Uncurated Go view Shigella flexneri 301 ABT-0089856 mtlD CDS
Automated Process Uncurated Go view Shigella flexneri 8401 BAG-0004186 mtlD CDS
Automated Process Uncurated Go view Shigella sonnei 046 ADD-0004149 mtlD CDS
Automated Process Uncurated Go view Yersinia bercovieri ATCC 43970 [T] AEK-0000189 CDS
Automated Process Uncurated Go view Yersinia enterocolitica 8081 BAH-0011956 mtlD CDS
Automated Process Uncurated Go view Yersinia frederiksenii ATCC 33641 [T] AEI-0002384 mtlD2 CDS
Automated Process Uncurated Go view Yersinia intermedia ATCC 29909 [T] AEH-0002099 mtlD CDS
Automated Process Uncurated Go view Yersinia mollaretii ATCC 43969 [T] AEJ-0003020 CDS
Automated Process Uncurated Go view Yersinia pestis 91001 (biovar Microtus) ACQ-0243840 mtlD CDS
Automated Process Uncurated Go view Yersinia pestis Angola (biovar Pestoides) ADI-0007902 mtlD CDS
Automated Process Uncurated Go view Yersinia pestis Antiqua (biovar Antiqua) BAE-0003610 mtlD CDS
Automated Process Uncurated Go view Yersinia pestis B42003004 (biovar Antiqua) BAL-0007228 mtlD CDS
Automated Process Uncurated Go view Yersinia pestis CA88-4125 (biovar Orientalis) BAF-0003343 mtlD CDS
Automated Process Uncurated Go view Yersinia pestis CO92 (biovar Orientalis) ABY-0129029 mtlD CDS
Automated Process Uncurated Go view Yersinia pestis E1979001 (biovar Antiqua) BAM-0005792 mtlD CDS
Automated Process Uncurated Go view Yersinia pestis F1991016 (biovar Orientalis) BAQ-0006394 mtlD CDS
Automated Process Uncurated Go view Yersinia pestis FV-1 (biovar Orientalis) BAK-0003990 CDS
Automated Process Uncurated Go view Yersinia pestis IP275 (biovar Orientalis) BAC-0006182 mtlD CDS
Automated Process Uncurated Go view Yersinia pestis K1973002 (biovar Mediaevalis) BAO-0006674 mtlD CDS
Automated Process Uncurated Go view Yersinia pestis KIM (biovar Mediaevalis) ABI-0033886 mtlD CDS
Automated Process Uncurated Go view Yersinia pestis MG05-1020 (biovar Orientalis) BAP-0006686 mtlD CDS
Automated Process Uncurated Go view Yersinia pestis Nepal516 (biovar Antiqua) BAD-0004465 mtlD CDS
Automated Process Uncurated Go view Yersinia pestis Pestoides F (biovar Pestoides) BAI-0000031 CDS
Automated Process Uncurated Go view Yersinia pestis UG05-0454 (biovar Antiqua) BAN-0004936 mtlD CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP31758 ADS-0008166 mtlD CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP32953 ACZ-0004039 mtlD CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis PB1/+ AFV-0004923 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis YPIII AFW-0000032 CDS
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 3865024 to 3876172
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
AEC-0000001sourceforward14686137Contains
AEC-0004546yibVpseudogeneforward38649453865383Upstream
AEC-0003351yibHCDScomplement38658433866979Upstream
AEC-0003352yibICDScomplement38669823867344Upstream
AEC-0003353mtlACDSforward38678813869794Upstream
AEC-0003354mtlDCDSforward38700243871172Matches
AEC-0003355mtlRCDSforward38711723871759Overlaps Downstream
AEC-0004095yibTCDScomplement38717713871980Downstream
AEC-0003356yibLCDSforward38722653872627Downstream
AEC-0003357lldPCDSforward38729993874654Downstream
AEC-0003358lldRCDSforward38746543875430Downstream
AEC-0003359lldDCDSforward38754273876617Downstream
Release Notes to toptop
submitted to GenBank; assigned accession number CP000948