Escherichia coli K-12 DH10B
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Working With: Genome: Escherichia coli K-12 DH10B Version: 10

AEC-0003371 (kbl) - Escherichia coli K-12 DH10B - Feature Annotation

ASAP ID
AEC-0003371 showshow history
Names
kbl ECDH10B_3799
Product
glycine C-acetyltransferase
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome complement 3886955 3888151 1197 399
Sequence

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Context

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Pre-Run Search Results
Search Database View Results
InterProScan
BLASTP
Protein Families to toptop
Author Approval Family Annotated
Automated Process Approved IPR001917 (IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site) Jul 2009
Automated Process Approved IPR004839 (IPR004839 Aminotransferase, class I/classII) Jul 2009
Automated Process Approved IPR015421 (IPR015421 Pyridoxal phosphate-dependent transferase, major domain) Jul 2009
Automated Process Approved IPR011282 (IPR011282 2-amino-3-ketobutyrate coenzyme A ligase) Jul 2009
Automated Process Approved IPR015424 (IPR015424 Pyridoxal phosphate-dependent transferase) Jul 2009
Protein Domains to toptop
Internal error getting result
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Automated Process Approved GO biological process GO:0008152 metabolic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001917
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO biological process GO:0009058 biosynthetic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR004839
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0003824 catalytic activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR015421
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0008890 glycine C-acetyltransferase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR011282
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0016769 transferase activity, transferring nitrogenous groups GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR004839
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0016740 transferase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001917
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0030170 pyridoxal phosphate binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR004839
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Approved name kbl Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0011832
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Person Approved locus tag ECDH10B_3799 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu
Reference: Escherichia coli K-12 DH10B 		Feb 2008
Product
Person Approved product glycine C-acetyltransferase Published Annotation - PubMed ID: 16397293
Reference: Escherichia coli K-12 		Mar 2007
Protein Family
Automated Process Approved protein family IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site Protein Sequence Similarity - InterPro Domain: IPR001917
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR004839 Aminotransferase, class I/classII Protein Sequence Similarity - InterPro Domain: IPR004839
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR015421 Pyridoxal phosphate-dependent transferase, major domain Protein Sequence Similarity - InterPro Domain: IPR015421
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR015424 Pyridoxal phosphate-dependent transferase Protein Sequence Similarity - InterPro Domain: IPR015424
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR011282 2-amino-3-ketobutyrate coenzyme A ligase Protein Sequence Similarity - InterPro Domain: IPR011282
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Other
Person Approved comment 100% identical to E. coli K-12 MG1655 feature ABE-0011832 Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0011832
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Gene Ontology
Automated Process Approved GO biological process GO:0009058 biosynthetic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR004839
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO biological process GO:0008152 metabolic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001917
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0016769 transferase activity, transferring nitrogenous groups GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR004839
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0030170 pyridoxal phosphate binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR004839
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0008890 glycine C-acetyltransferase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR011282
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0016740 transferase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001917
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0003824 catalytic activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR015421
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0001746 kbl CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0001835 kbl CDS
Ortholog
Automated Process Uncurated Go view Dickeya dadantii 3937 ABF-0017701 kbl CDS
Automated Process Uncurated Go view Escherichia albertii TW07627 AFX-0001552 kbl CDS
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0004680 kbl CDS
Automated Process Uncurated Go view Escherichia coli 536 (UPEC) AEF-0003757 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0007449 kbl CDS
Automated Process Uncurated Go view Escherichia coli APEC O1 (APEC) AEG-0003674 kbl CDS
Automated Process Uncurated Go view Escherichia coli ATCC 8739 AEM-0005420 CDS
Automated Process Uncurated Go view Escherichia coli B171 (EPEC) ADN-0007030 kbl CDS
Automated Process Uncurated Go view Escherichia coli B7A (ETEC) ADK-0008523 CDS
Automated Process Uncurated Go view Escherichia coli CFT073 (UPEC) ABR-0080621 kbl CDS
Automated Process Uncurated Go view Escherichia coli E110019 (EPEC) ADM-0006954 kbl CDS
Automated Process Uncurated Go view Escherichia coli E22 (EPEC) ADL-0010072 kbl CDS
Automated Process Uncurated Go view Escherichia coli E2348/69 (EPEC) BCI-0004110 kbl CDS
Automated Process Uncurated Go view Escherichia coli E24377A (ETEC) ADO-0008553 kbl CDS
Automated Process Uncurated Go view Escherichia coli EC4024 (EHEC) BBI-0005544 CDS
Automated Process Uncurated Go view Escherichia coli EC4042 (EHEC) BBA-0008321 kbl CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0006835 kbl CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0006385 kbl CDS
Automated Process Uncurated Go view Escherichia coli EC4113 (EHEC) BAY-0005040 kbl CDS
Automated Process Uncurated Go view Escherichia coli EC4115 (EHEC) BAS-0009824 kbl CDS
Automated Process Uncurated Go view Escherichia coli EC4196 (EHEC) BAX-0005123 kbl CDS
Automated Process Uncurated Go view Escherichia coli EC4206 (EHEC) BAW-0007636 kbl CDS
Automated Process Uncurated Go view Escherichia coli EC4401 (EHEC) BAV-0005422 kbl CDS
Automated Process Uncurated Go view Escherichia coli EC4486 (EHEC) BAU-0005488 kbl CDS
Automated Process Uncurated Go view Escherichia coli EC4501 (EHEC) BAT-0005330 kbl CDS
Automated Process Uncurated Go view Escherichia coli EC508 (EHEC) BBJ-0005216 kbl CDS
Automated Process Uncurated Go view Escherichia coli EC869 (EHEC) BBC-0005815 kbl CDS
Automated Process Uncurated Go view Escherichia coli EDL933 (EHEC) ABH-0028688 kbl CDS
Automated Process Uncurated Go view Escherichia coli F11 (UPEC) ADQ-0005333 kbl CDS
Automated Process Uncurated Go view Escherichia coli HS ADR-0008517 kbl CDS
Person Uncurated Go view Escherichia coli K-12 MG1655 ABE-0011832 kbl CDS
Automated Process Uncurated Go view Escherichia coli K-12 W3110 ADY-0003747 kbl CDS
Automated Process Uncurated Go view Escherichia coli SE11 AFS-0003972 CDS
Automated Process Uncurated Go view Escherichia coli SMS-3-5 AFT-0003951 kbl CDS
Automated Process Uncurated Go view Escherichia coli Sakai (EHEC) ACA-0134569 kbl CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0002870 CDS
Automated Process Uncurated Go view Escherichia coli UTI89 (UPEC) AEA-0004172 kbl CDS
Automated Process Uncurated Go view Pectobacterium atrosepticum SCRI1043 ABL-0060368 kbl CDS
Automated Process Uncurated Go view Pectobacterium carotovorum WPP14 ADT-0000041 kbl CDS
Automated Process Uncurated Go view Pectobacterium parmentieri WPP163 AFJ-0003021 kbl CDS
Automated Process Uncurated Go view Salmonella Agona SL483 BBX-0008094 kbl CDS
Automated Process Uncurated Go view Salmonella Arizonae CDC 346-86 BCD-0004123 CDS
Automated Process Uncurated Go view Salmonella Choleraesuis SC-B67 ADB-0004247 kbl CDS
Automated Process Uncurated Go view Salmonella Dublin CT_02021853 BCB-0008342 kbl CDS
Automated Process Uncurated Go view Salmonella Enteritidis P125109 BCF-0011630 kbl CDS
Automated Process Uncurated Go view Salmonella Gallinarum 287/91 BCG-0011354 kbl CDS
Automated Process Uncurated Go view Salmonella Hadar RI_05P066 BBT-0005153 kbl CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL476 BBV-0008392 kbl CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL486 BBW-0005741 kbl CDS
Automated Process Uncurated Go view Salmonella Javiana GA_MM04042433 BCA-0006062 kbl CDS
Automated Process Uncurated Go view Salmonella Kentucky CVM29188 BBP-0007488 kbl CDS
Automated Process Uncurated Go view Salmonella Newport SL254 BBQ-0008344 kbl CDS
Automated Process Uncurated Go view Salmonella Newport SL317 BBR-0006502 kbl CDS
Automated Process Uncurated Go view Salmonella Paratyphi A AKU_12601 BCH-0003597 CDS
Automated Process Uncurated Go view Salmonella Paratyphi A ATCC 9150 ADA-0003560 kbl CDS
Automated Process Uncurated Go view Salmonella Paratyphi B SPB7 BCC-0004625 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA23 BBN-0008515 kbl CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA29 BBM-0004477 kbl CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund CVM19633 BBO-0007976 kbl CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund SL480 BBY-0004783 kbl CDS
Automated Process Uncurated Go view Salmonella Typhi CT18 ABX-0113561 kbl CDS
Automated Process Uncurated Go view Salmonella Typhi Ty2 ABS-0085536 kbl CDS
Automated Process Uncurated Go view Salmonella Typhimurium LT2 [T] ABU-0101475 kbl CDS
Automated Process Uncurated Go view Salmonella Virchow SL491 BBS-0005499 kbl CDS
Automated Process Uncurated Go view Salmonella Weltevreden SL484 BBU-0004927 kbl CDS
Automated Process Uncurated Go view Salmonella enterica CVM23701 BBL-0008391 kbl CDS
Automated Process Uncurated Go view Shigella boydii 227 ADV-0003954 kbl CDS
Automated Process Uncurated Go view Shigella boydii BS512 ADJ-0009465 kbl CDS
Automated Process Uncurated Go view Shigella dysenteriae 1012 BAA-0003194 kbl CDS
Automated Process Uncurated Go view Shigella dysenteriae 197 ADU-0004566 kbl CDS
Automated Process Uncurated Go view Shigella flexneri 2457T ABQ-0075385 kbl CDS
Automated Process Uncurated Go view Shigella flexneri 301 ABT-0089879 kbl CDS
Automated Process Uncurated Go view Shigella flexneri 8401 BAG-0004157 kbl CDS
Automated Process Uncurated Go view Shigella sonnei 046 ADD-0004127 kbl CDS
Automated Process Uncurated Go view Yersinia bercovieri ATCC 43970 [T] AEK-0001330 CDS
Automated Process Uncurated Go view Yersinia enterocolitica 8081 BAH-0000223 kbl CDS
Automated Process Uncurated Go view Yersinia frederiksenii ATCC 33641 [T] AEI-0003168 kbl CDS
Automated Process Uncurated Go view Yersinia intermedia ATCC 29909 [T] AEH-0003848 kbl CDS
Automated Process Uncurated Go view Yersinia mollaretii ATCC 43969 [T] AEJ-0001728 CDS
Automated Process Uncurated Go view Yersinia pestis 91001 (biovar Microtus) ACQ-0234372 kbl CDS
Automated Process Uncurated Go view Yersinia pestis Angola (biovar Pestoides) ADI-0004169 kbl CDS
Automated Process Uncurated Go view Yersinia pestis Antiqua (biovar Antiqua) BAE-0004155 kbl CDS
Automated Process Uncurated Go view Yersinia pestis B42003004 (biovar Antiqua) BAL-0007787 kbl CDS
Automated Process Uncurated Go view Yersinia pestis CA88-4125 (biovar Orientalis) BAF-0003229 kbl CDS
Automated Process Uncurated Go view Yersinia pestis CO92 (biovar Orientalis) ABY-0115521 kbl CDS
Automated Process Uncurated Go view Yersinia pestis E1979001 (biovar Antiqua) BAM-0007921 kbl CDS
Automated Process Uncurated Go view Yersinia pestis F1991016 (biovar Orientalis) BAQ-0006262 kbl CDS
Automated Process Uncurated Go view Yersinia pestis FV-1 (biovar Orientalis) BAK-0001165 CDS
Automated Process Uncurated Go view Yersinia pestis IP275 (biovar Orientalis) BAC-0005485 kbl CDS
Automated Process Uncurated Go view Yersinia pestis K1973002 (biovar Mediaevalis) BAO-0007967 kbl CDS
Automated Process Uncurated Go view Yersinia pestis KIM (biovar Mediaevalis) ABI-0029667 kbl CDS
Automated Process Uncurated Go view Yersinia pestis MG05-1020 (biovar Orientalis) BAP-0005080 kbl CDS
Automated Process Uncurated Go view Yersinia pestis Nepal516 (biovar Antiqua) BAD-0004555 kbl CDS
Automated Process Uncurated Go view Yersinia pestis Pestoides F (biovar Pestoides) BAI-0004620 CDS
Automated Process Uncurated Go view Yersinia pestis UG05-0454 (biovar Antiqua) BAN-0008868 kbl CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP31758 ADS-0003998 kbl CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP32953 ACZ-0000063 kbl CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis PB1/+ AFV-0000064 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis YPIII AFW-0004921 CDS
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 3881955 to 3893151
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
AEC-0000001sourceforward14686137Contains
AEC-0003366gpmICDSforward38808603882404Downstream
AEC-0003367envCCDSforward38824383883697Downstream
AEC-0003368yibQCDSforward38837013884660Downstream
AEC-0003369yibDCDScomplement38846473885681Downstream
AEC-0003370tdhCDScomplement38859203886945Downstream
AEC-0003371kblCDScomplement38869553888151Matches
AEC-0003372htrLCDScomplement38884263889283Upstream
AEC-0003373rfaDCDSforward38895873890519Upstream
AEC-0003374rfaFCDSforward38905293891575Upstream
AEC-0003375rfaCCDSforward38915793892538Upstream
AEC-0003376rfaLCDSforward38925483893807Upstream
Release Notes to toptop
submitted to GenBank; assigned accession number CP000948