Escherichia coli K-12 DH10B
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Working With: Genome: Escherichia coli K-12 DH10B Version: 10

AEC-0003388 (coaD) - Escherichia coli K-12 DH10B - Feature Annotation

ASAP ID
AEC-0003388 showshow history
Names
coaD ECDH10B_3816
Product
pantetheine-phosphate adenylyltransferase
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome forward 3905425 3905904 480 160
Sequence

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View sequence with flanking regions: bases upstream and bases downstream

Context

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Pre-Run Search Results
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InterProScan
BLASTP
Protein Families to toptop
Author Approval Family Annotated
Automated Process Approved IPR004820 (IPR004820 (DEPRECATED) Cytidylyltransferase) Jul 2009
Automated Process Approved IPR014729 (IPR014729 Rossmann-like alpha/beta/alpha sandwich fold) Jul 2009
Automated Process Approved IPR004821 (IPR004821 Cytidyltransferase-like domain) Jul 2009
Automated Process Approved IPR001980 (IPR001980 Phosphopantetheine adenylyltransferase) Jul 2009
Protein Domains to toptop
Internal error getting result
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Automated Process Approved GO biological process GO:0009058 biosynthetic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR004820
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO biological process GO:0015937 coenzyme A biosynthetic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001980
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0004595 pantetheine-phosphate adenylyltransferase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001980
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0016779 nucleotidyltransferase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR004820
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0003824 catalytic activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR004821
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Approved name coaD Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0011875
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Person Approved locus tag ECDH10B_3816 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu
Reference: Escherichia coli K-12 DH10B 		Feb 2008
Product
Person Approved product pantetheine-phosphate adenylyltransferase Published Annotation - PubMed ID: 16397293
Reference: Escherichia coli K-12 		Mar 2007
Protein Family
Automated Process Approved protein family IPR004820 (DEPRECATED) Cytidylyltransferase Protein Sequence Similarity - InterPro Domain: IPR004820
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Protein Sequence Similarity - InterPro Domain: IPR014729
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR004821 Cytidyltransferase-like domain Protein Sequence Similarity - InterPro Domain: IPR004821
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR001980 Phosphopantetheine adenylyltransferase Protein Sequence Similarity - InterPro Domain: IPR001980
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Other
Person Approved comment 100% identical to E. coli K-12 MG1655 feature ABE-0011875 Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0011875
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Gene Ontology
Automated Process Approved GO biological process GO:0009058 biosynthetic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR004820
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO biological process GO:0015937 coenzyme A biosynthetic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001980
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0003824 catalytic activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR004821
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0004595 pantetheine-phosphate adenylyltransferase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001980
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0016779 nucleotidyltransferase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR004820
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0000362 coaD CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0000422 coaD CDS
Ortholog
Automated Process Uncurated Go view Dickeya dadantii 3937 ABF-0017684 coaD CDS
Automated Process Uncurated Go view Erwinia tasmaniensis Et1/99 [T] AFI-0000075 coaD CDS
Automated Process Uncurated Go view Escherichia albertii TW07627 AFX-0001536 coaD CDS
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0004666 coaD CDS
Automated Process Uncurated Go view Escherichia coli 536 (UPEC) AEF-0003771 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0007434 coaD CDS
Automated Process Uncurated Go view Escherichia coli APEC O1 (APEC) AEG-0005378 CDS
Automated Process Uncurated Go view Escherichia coli ATCC 8739 AEM-0005406 CDS
Automated Process Uncurated Go view Escherichia coli B171 (EPEC) ADN-0010620 coaD CDS
Automated Process Uncurated Go view Escherichia coli B7A (ETEC) ADK-0008109 CDS
Automated Process Uncurated Go view Escherichia coli CFT073 (UPEC) ABR-0080635 coaD CDS
Automated Process Uncurated Go view Escherichia coli E110019 (EPEC) ADM-0008930 coaD CDS
Automated Process Uncurated Go view Escherichia coli E22 (EPEC) ADL-0007445 coaD CDS
Automated Process Uncurated Go view Escherichia coli E2348/69 (EPEC) BCI-0004126 coaD CDS
Automated Process Uncurated Go view Escherichia coli E24377A (ETEC) ADO-0008567 coaD CDS
Automated Process Uncurated Go view Escherichia coli EC4024 (EHEC) BBI-0005558 CDS
Automated Process Uncurated Go view Escherichia coli EC4042 (EHEC) BBA-0008335 coaD CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0006849 coaD CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0006400 coaD CDS
Automated Process Uncurated Go view Escherichia coli EC4113 (EHEC) BAY-0006856 coaD CDS
Automated Process Uncurated Go view Escherichia coli EC4115 (EHEC) BAS-0009838 coaD CDS
Automated Process Uncurated Go view Escherichia coli EC4196 (EHEC) BAX-0005109 coaD CDS
Automated Process Uncurated Go view Escherichia coli EC4206 (EHEC) BAW-0007651 coaD CDS
Automated Process Uncurated Go view Escherichia coli EC4401 (EHEC) BAV-0005436 coaD CDS
Automated Process Uncurated Go view Escherichia coli EC4486 (EHEC) BAU-0005502 coaD CDS
Automated Process Uncurated Go view Escherichia coli EC4501 (EHEC) BAT-0005344 coaD CDS
Automated Process Uncurated Go view Escherichia coli EC869 (EHEC) BBC-0005830 coaD CDS
Automated Process Uncurated Go view Escherichia coli EDL933 (EHEC) ABH-0028704 coaD CDS
Automated Process Uncurated Go view Escherichia coli F11 (UPEC) ADQ-0005319 coaD CDS
Automated Process Uncurated Go view Escherichia coli HS ADR-0008531 coaD CDS
Person Uncurated Go view Escherichia coli K-12 MG1655 ABE-0011875 coaD CDS
Automated Process Uncurated Go view Escherichia coli K-12 W3110 ADY-0003730 coaD CDS
Automated Process Uncurated Go view Escherichia coli SE11 AFS-0003986 CDS
Automated Process Uncurated Go view Escherichia coli SMS-3-5 AFT-0003966 coaD CDS
Automated Process Uncurated Go view Escherichia coli Sakai (EHEC) ACA-0134583 coaD CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0002884 CDS
Automated Process Uncurated Go view Escherichia coli UTI89 (UPEC) AEA-0004186 kdtB CDS
Automated Process Uncurated Go view Pectobacterium atrosepticum SCRI1043 ABL-0060352 coaD CDS
Automated Process Uncurated Go view Pectobacterium brasiliensis 1692 AED-0003650 coaD CDS
Automated Process Uncurated Go view Pectobacterium carotovorum WPP14 ADT-0003439 KdtB CDS
Automated Process Uncurated Go view Pectobacterium parmentieri WPP163 AFJ-0003006 coaD CDS
Automated Process Uncurated Go view Salmonella Agona SL483 BBX-0008109 coaD CDS
Automated Process Uncurated Go view Salmonella Arizonae CDC 346-86 BCD-0004106 CDS
Automated Process Uncurated Go view Salmonella Choleraesuis SC-B67 ADB-0004263 coaD CDS
Automated Process Uncurated Go view Salmonella Dublin CT_02021853 BCB-0008358 coaD CDS
Automated Process Uncurated Go view Salmonella Enteritidis P125109 BCF-0011669 kdtB CDS
Automated Process Uncurated Go view Salmonella Gallinarum 287/91 BCG-0011316 kdtB CDS
Automated Process Uncurated Go view Salmonella Hadar RI_05P066 BBT-0005137 coaD CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL476 BBV-0008409 coaD CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL486 BBW-0005758 coaD CDS
Automated Process Uncurated Go view Salmonella Javiana GA_MM04042433 BCA-0006046 coaD CDS
Automated Process Uncurated Go view Salmonella Kentucky CDC 191 BBZ-0006960 coaD CDS
Automated Process Uncurated Go view Salmonella Kentucky CVM29188 BBP-0007506 coaD CDS
Automated Process Uncurated Go view Salmonella Newport SL254 BBQ-0008360 coaD CDS
Automated Process Uncurated Go view Salmonella Newport SL317 BBR-0006485 coaD CDS
Automated Process Uncurated Go view Salmonella Paratyphi A AKU_12601 BCH-0003613 CDS
Automated Process Uncurated Go view Salmonella Paratyphi A ATCC 9150 ADA-0003576 coaD CDS
Automated Process Uncurated Go view Salmonella Paratyphi B SPB7 BCC-0004643 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA23 BBN-0008530 coaD CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA29 BBM-0004461 coaD CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund CVM19633 BBO-0007992 coaD CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund SL480 BBY-0004799 coaD CDS
Automated Process Uncurated Go view Salmonella Typhi CT18 ABX-0113534 coaD CDS
Automated Process Uncurated Go view Salmonella Typhi Ty2 ABS-0085519 coaD CDS
Automated Process Uncurated Go view Salmonella Typhimurium LT2 [T] ABU-0101516 coaD CDS
Automated Process Uncurated Go view Salmonella Virchow SL491 BBS-0005482 coaD CDS
Automated Process Uncurated Go view Salmonella Weltevreden SL484 BBU-0004910 coaD CDS
Automated Process Uncurated Go view Salmonella enterica CVM23701 BBL-0008407 coaD CDS
Automated Process Uncurated Go view Shigella boydii 227 ADV-0003967 coaD CDS
Automated Process Uncurated Go view Shigella boydii BS512 ADJ-0009479 coaD CDS
Automated Process Uncurated Go view Shigella dysenteriae 1012 BAA-0003211 coaD CDS
Automated Process Uncurated Go view Shigella dysenteriae 197 ADU-0004580 coaD CDS
Automated Process Uncurated Go view Shigella flexneri 2457T ABQ-0075369 coaD CDS
Automated Process Uncurated Go view Shigella flexneri 301 ABT-0089895 coaD CDS
Automated Process Uncurated Go view Shigella flexneri 8401 BAG-0004140 kdtB CDS
Automated Process Uncurated Go view Shigella sonnei 046 ADD-0004113 coaD CDS
Automated Process Uncurated Go view Yersinia bercovieri ATCC 43970 [T] AEK-0001324 CDS
Automated Process Uncurated Go view Yersinia enterocolitica 8081 BAH-0000210 coaD CDS
Automated Process Uncurated Go view Yersinia frederiksenii ATCC 33641 [T] AEI-0003755 coaD CDS
Automated Process Uncurated Go view Yersinia intermedia ATCC 29909 [T] AEH-0003842 coaD CDS
Automated Process Uncurated Go view Yersinia mollaretii ATCC 43969 [T] AEJ-0001734 CDS
Automated Process Uncurated Go view Yersinia pestis 91001 (biovar Microtus) ACQ-0234361 coaD CDS
Automated Process Uncurated Go view Yersinia pestis Angola (biovar Pestoides) ADI-0004163 coaD CDS
Automated Process Uncurated Go view Yersinia pestis Antiqua (biovar Antiqua) BAE-0004162 coaD CDS
Automated Process Uncurated Go view Yersinia pestis B42003004 (biovar Antiqua) BAL-0007793 coaD CDS
Automated Process Uncurated Go view Yersinia pestis CA88-4125 (biovar Orientalis) BAF-0003235 coaD CDS
Automated Process Uncurated Go view Yersinia pestis CO92 (biovar Orientalis) ABY-0115507 coaD CDS
Automated Process Uncurated Go view Yersinia pestis E1979001 (biovar Antiqua) BAM-0007927 coaD CDS
Automated Process Uncurated Go view Yersinia pestis F1991016 (biovar Orientalis) BAQ-0006268 coaD CDS
Automated Process Uncurated Go view Yersinia pestis FV-1 (biovar Orientalis) BAK-0001159 CDS
Automated Process Uncurated Go view Yersinia pestis IP275 (biovar Orientalis) BAC-0005491 coaD CDS
Automated Process Uncurated Go view Yersinia pestis K1973002 (biovar Mediaevalis) BAO-0007961 coaD CDS
Automated Process Uncurated Go view Yersinia pestis KIM (biovar Mediaevalis) ABI-0029674 coaD CDS
Automated Process Uncurated Go view Yersinia pestis MG05-1020 (biovar Orientalis) BAP-0005086 coaD CDS
Automated Process Uncurated Go view Yersinia pestis Nepal516 (biovar Antiqua) BAD-0004562 coaD CDS
Automated Process Uncurated Go view Yersinia pestis Pestoides F (biovar Pestoides) BAI-0004627 CDS
Automated Process Uncurated Go view Yersinia pestis UG05-0454 (biovar Antiqua) BAN-0008418 coaD CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP31758 ADS-0003992 coaD CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP32953 ACZ-0000057 coaD CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis PB1/+ AFV-0000057 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis YPIII AFW-0004928 CDS
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 3900425 to 3910904
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
AEC-0000001sourceforward14686137Contains
AEC-0003383rfaSCDScomplement38997813900716Upstream
AEC-0003384rfaPCDScomplement39007533901550Upstream
AEC-0003385rfaGCDScomplement39015433902667Upstream
AEC-0003386rfaQCDScomplement39026643903698Upstream
AEC-0003387kdtACDSforward39041403905417Upstream
AEC-0003388coaDCDSforward39054253905904Matches
AEC-0003389mutMCDScomplement39059433906752Downstream
AEC-0003390rpmGCDScomplement39068503907017Downstream
AEC-0003391rpmBCDScomplement39070383907274Downstream
AEC-0003392yicRCDScomplement39074913908159Downstream
AEC-0003393dfpCDSforward39083313909551Downstream
AEC-0003394dutCDSforward39095323909987Downstream
AEC-0003395ttkCDSforward39100943910690Downstream
AEC-0003396pyrECDScomplement39107273911368Downstream
Release Notes to toptop
submitted to GenBank; assigned accession number CP000948