Escherichia coli K-12 DH10B
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Working With: Genome: Escherichia coli K-12 DH10B Version: 10

AEC-0003471 (pstA) - Escherichia coli K-12 DH10B - Feature Annotation

ASAP ID
AEC-0003471 showshow history
Names
pstA ECDH10B_3913
Product
phosphate transporter subunit; membrane component of ABC superfamily
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome complement 4004156 4005046 891 297
Sequence

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Context

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Pre-Run Search Results
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InterProScan
BLASTP
Protein Families to toptop
Author Approval Family Annotated
Automated Process Approved IPR000515 (IPR000515 ABC transporter type 1, transmembrane domain MetI-like) Jul 2009
Automated Process Approved IPR005672 (IPR005672 Phosphate transport system permease protein PstA) Jul 2009
Protein Domains to toptop
Internal error getting result
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Automated Process Approved GO biological process GO:0006817 phosphate ion transport GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR005672
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO biological process GO:0006810 transport GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR000515
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO cellular component GO:0009276 Gram-negative-bacterium-type cell wall GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR005672
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO cellular component GO:0016020 membrane GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR000515
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0015114 phosphate ion transmembrane transporter activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR005672
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0005215 transporter activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR000515
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0005315 inorganic phosphate transmembrane transporter activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR005672
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Approved name pstA Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0012184
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Person Approved locus tag ECDH10B_3913 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu
Reference: Escherichia coli K-12 DH10B 		Feb 2008
Product
Person Approved product phosphate transporter subunit; membrane component of ABC superfamily Published Annotation - PubMed ID: 16397293
Reference: Escherichia coli K-12 		Mar 2007
Protein Family
Automated Process Approved protein family IPR000515 ABC transporter type 1, transmembrane domain MetI-like Protein Sequence Similarity - InterPro Domain: IPR000515
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR005672 Phosphate transport system permease protein PstA Protein Sequence Similarity - InterPro Domain: IPR005672
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Other
Person Approved comment 100% identical to E. coli K-12 MG1655 feature ABE-0012184 Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0012184
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Gene Ontology
Automated Process Approved GO biological process GO:0006810 transport GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR000515
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO biological process GO:0006817 phosphate ion transport GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR005672
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO cellular component GO:0016020 membrane GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR000515
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO cellular component GO:0009276 Gram-negative-bacterium-type cell wall GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR005672
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0015114 phosphate ion transmembrane transporter activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR005672
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0005215 transporter activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR000515
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0005315 inorganic phosphate transmembrane transporter activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR005672
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0001147 pstA CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0001128 pstA CDS
Ortholog
Automated Process Uncurated Go view Dickeya dadantii 3937 ABF-0016276 pstA CDS
Automated Process Uncurated Go view Erwinia tasmaniensis Et1/99 [T] AFI-0003572 pstA CDS
Automated Process Uncurated Go view Escherichia albertii TW07627 AFX-0001611 pstA CDS
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0004542 pstA CDS
Automated Process Uncurated Go view Escherichia coli 536 (UPEC) AEF-0003964 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0007327 pstA CDS
Automated Process Uncurated Go view Escherichia coli APEC O1 (APEC) AEG-0003779 pstA CDS
Automated Process Uncurated Go view Escherichia coli ATCC 8739 AEM-0010507 CDS
Automated Process Uncurated Go view Escherichia coli B171 (EPEC) ADN-0007649 pstA CDS
Automated Process Uncurated Go view Escherichia coli B7A (ETEC) ADK-0005872 PtsA CDS
Automated Process Uncurated Go view Escherichia coli CFT073 (UPEC) ABR-0080836 pstA CDS
Automated Process Uncurated Go view Escherichia coli E110019 (EPEC) ADM-0007639 pstA CDS
Automated Process Uncurated Go view Escherichia coli E22 (EPEC) ADL-0007544 pstA CDS
Automated Process Uncurated Go view Escherichia coli E2348/69 (EPEC) BCI-0004287 pstA CDS
Automated Process Uncurated Go view Escherichia coli E24377A (ETEC) ADO-0008668 pstA CDS
Automated Process Uncurated Go view Escherichia coli EC4024 (EHEC) BBI-0005711 CDS
Automated Process Uncurated Go view Escherichia coli EC4042 (EHEC) BBA-0008484 pstA CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0006999 pstA CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0006547 pstA CDS
Automated Process Uncurated Go view Escherichia coli EC4113 (EHEC) BAY-0006707 pstA CDS
Automated Process Uncurated Go view Escherichia coli EC4115 (EHEC) BAS-0009989 pstA CDS
Automated Process Uncurated Go view Escherichia coli EC4196 (EHEC) BAX-0004960 pstA CDS
Automated Process Uncurated Go view Escherichia coli EC4206 (EHEC) BAW-0007802 pstA CDS
Automated Process Uncurated Go view Escherichia coli EC4401 (EHEC) BAV-0005587 pstA CDS
Automated Process Uncurated Go view Escherichia coli EC4486 (EHEC) BAU-0005654 pstA CDS
Automated Process Uncurated Go view Escherichia coli EC4501 (EHEC) BAT-0005519 pstA CDS
Automated Process Uncurated Go view Escherichia coli EC508 (EHEC) BBJ-0006514 pstA CDS
Automated Process Uncurated Go view Escherichia coli EC869 (EHEC) BBC-0006869 pstA CDS
Automated Process Uncurated Go view Escherichia coli EDL933 (EHEC) ABH-0028856 pstA CDS
Automated Process Uncurated Go view Escherichia coli F11 (UPEC) ADQ-0005200 pstA CDS
Automated Process Uncurated Go view Escherichia coli HS ADR-0008627 pstA CDS
Person Uncurated Go view Escherichia coli K-12 MG1655 ABE-0012184 pstA CDS
Automated Process Uncurated Go view Escherichia coli K-12 W3110 ADY-0003629 pstA CDS
Automated Process Uncurated Go view Escherichia coli SE11 AFS-0004084 CDS
Automated Process Uncurated Go view Escherichia coli SMS-3-5 AFT-0004087 pstA CDS
Automated Process Uncurated Go view Escherichia coli Sakai (EHEC) ACA-0134740 pstA CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0003062 CDS
Automated Process Uncurated Go view Escherichia coli UTI89 (UPEC) AEA-0004287 pstA CDS
Automated Process Uncurated Go view Pectobacterium atrosepticum SCRI1043 ABL-0064812 pstA CDS
Automated Process Uncurated Go view Pectobacterium brasiliensis 1692 AED-0002674 pstA CDS
Automated Process Uncurated Go view Pectobacterium parmentieri WPP163 AFJ-0001400 pstA CDS
Automated Process Uncurated Go view Salmonella Agona SL483 BBX-0008247 pstA CDS
Automated Process Uncurated Go view Salmonella Arizonae CDC 346-86 BCD-0003978 CDS
Automated Process Uncurated Go view Salmonella Choleraesuis SC-B67 ADB-0004409 pstA CDS
Automated Process Uncurated Go view Salmonella Dublin CT_02021853 BCB-0008488 pstA CDS
Automated Process Uncurated Go view Salmonella Enteritidis P125109 BCF-0012092 pstA CDS
Automated Process Uncurated Go view Salmonella Gallinarum 287/91 BCG-0010927 pstA CDS
Automated Process Uncurated Go view Salmonella Hadar RI_05P066 BBT-0005007 pstA CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL476 BBV-0008544 pstA CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL486 BBW-0005894 pstA CDS
Automated Process Uncurated Go view Salmonella Javiana GA_MM04042433 BCA-0005908 pstA CDS
Automated Process Uncurated Go view Salmonella Kentucky CDC 191 BBZ-0008675 pstA CDS
Automated Process Uncurated Go view Salmonella Kentucky CVM29188 BBP-0007636 pstA CDS
Automated Process Uncurated Go view Salmonella Newport SL254 BBQ-0008491 pstA CDS
Automated Process Uncurated Go view Salmonella Newport SL317 BBR-0006356 pstA CDS
Automated Process Uncurated Go view Salmonella Paratyphi A AKU_12601 BCH-0003734 CDS
Automated Process Uncurated Go view Salmonella Paratyphi A ATCC 9150 ADA-0003695 pstA CDS
Automated Process Uncurated Go view Salmonella Paratyphi B SPB7 BCC-0004814 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA23 BBN-0008664 pstA CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA29 BBM-0004324 pstA CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund CVM19633 BBO-0008132 pstA CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund SL480 BBY-0008949 pstA CDS
Automated Process Uncurated Go view Salmonella Typhi CT18 ABX-0113276 pstA CDS
Automated Process Uncurated Go view Salmonella Typhi Ty2 ABS-0085394 pstA CDS
Automated Process Uncurated Go view Salmonella Typhimurium LT2 [T] ABU-0101897 pstA CDS
Automated Process Uncurated Go view Salmonella Virchow SL491 BBS-0005307 pstA CDS
Automated Process Uncurated Go view Salmonella Weltevreden SL484 BBU-0009337 pstA CDS
Automated Process Uncurated Go view Salmonella enterica CVM23701 BBL-0009359 pstA CDS
Automated Process Uncurated Go view Shigella boydii 227 ADV-0003988 pstA CDS
Automated Process Uncurated Go view Shigella boydii BS512 ADJ-0009618 pstA CDS
Automated Process Uncurated Go view Shigella dysenteriae 1012 BAA-0003317 pstA CDS
Automated Process Uncurated Go view Shigella dysenteriae 197 ADU-0004538 pstA CDS
Automated Process Uncurated Go view Shigella flexneri 2457T ABQ-0075311 pstA CDS
Automated Process Uncurated Go view Shigella flexneri 301 ABT-0089951 pstA CDS
Automated Process Uncurated Go view Shigella flexneri 8401 BAG-0004016 pstA CDS
Automated Process Uncurated Go view Shigella sonnei 046 ADD-0004258 pstA CDS
Automated Process Uncurated Go view Yersinia bercovieri ATCC 43970 [T] AEK-0001590 CDS
Automated Process Uncurated Go view Yersinia enterocolitica 8081 BAH-0012110 phoT CDS
Automated Process Uncurated Go view Yersinia frederiksenii ATCC 33641 [T] AEI-0002435 pstA_1 CDS
Automated Process Uncurated Go view Yersinia intermedia ATCC 29909 [T] AEH-0002258 pstA CDS
Automated Process Uncurated Go view Yersinia mollaretii ATCC 43969 [T] AEJ-0001917 CDS
Automated Process Uncurated Go view Yersinia pestis 91001 (biovar Microtus) ACQ-0243953 pstA CDS
Automated Process Uncurated Go view Yersinia pestis Angola (biovar Pestoides) ADI-0008322 pstA1 CDS
Automated Process Uncurated Go view Yersinia pestis Antiqua (biovar Antiqua) BAE-0004960 pstA CDS
Automated Process Uncurated Go view Yersinia pestis B42003004 (biovar Antiqua) BAL-0007183 pstA1 CDS
Automated Process Uncurated Go view Yersinia pestis CA88-4125 (biovar Orientalis) BAF-0003302 pstA CDS
Automated Process Uncurated Go view Yersinia pestis CO92 (biovar Orientalis) ABY-0129187 pstA CDS
Automated Process Uncurated Go view Yersinia pestis E1979001 (biovar Antiqua) BAM-0005746 pstA1 CDS
Automated Process Uncurated Go view Yersinia pestis F1991016 (biovar Orientalis) BAQ-0006348 pstA1 CDS
Automated Process Uncurated Go view Yersinia pestis FV-1 (biovar Orientalis) BAK-0003887 CDS
Automated Process Uncurated Go view Yersinia pestis IP275 (biovar Orientalis) BAC-0009414 pstA1 CDS
Automated Process Uncurated Go view Yersinia pestis K1973002 (biovar Mediaevalis) BAO-0006628 pstA1 CDS
Automated Process Uncurated Go view Yersinia pestis KIM (biovar Mediaevalis) ABI-0033930 pstA CDS
Automated Process Uncurated Go view Yersinia pestis MG05-1020 (biovar Orientalis) BAP-0008913 pstA1 CDS
Automated Process Uncurated Go view Yersinia pestis Nepal516 (biovar Antiqua) BAD-0004757 pstA CDS
Automated Process Uncurated Go view Yersinia pestis Pestoides F (biovar Pestoides) BAI-0004709 CDS
Automated Process Uncurated Go view Yersinia pestis UG05-0454 (biovar Antiqua) BAN-0007902 pstA1 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP31758 ADS-0008208 pstA1 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP32953 ACZ-0004081 pstA CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis PB1/+ AFV-0004981 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis YPIII AFW-0005018 CDS
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 3999156 to 4010046
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
AEC-0000001sourceforward14686137Contains
AEC-0003466bglBCDScomplement39978963999308Downstream
AEC-0003467bglFCDScomplement39993274001204Downstream
AEC-0003468bglGCDScomplement40013384002174Downstream
AEC-0003469phoUCDScomplement40024604003185Downstream
AEC-0003470pstBCDScomplement40032004003973Downstream
AEC-0003471pstACDScomplement40041564005046Matches
AEC-0003472pstCCDScomplement40050464006005Overlaps Upstream
AEC-0003473pstSCDScomplement40060924007132Upstream
AEC-0003474glmUCDScomplement40094374010807Upstream
Release Notes to toptop
submitted to GenBank; assigned accession number CP000948