Escherichia coli K-12 DH10B
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Working With: Genome: Escherichia coli K-12 DH10B Version: 10

AEC-0003504 (ilvE) - Escherichia coli K-12 DH10B - Feature Annotation

ASAP ID
AEC-0003504 showshow history
Names
ilvE ECDH10B_3959
Product
branched-chain amino-acid aminotransferase
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome forward 4049427 4050356 930 310
Sequence

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Context

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InterProScan
BLASTP
Protein Families to toptop
Author Approval Family Annotated
Automated Process Approved IPR005785 (IPR005785 Branched-chain amino acid aminotransferase I) Jul 2009
Automated Process Approved IPR001544 (IPR001544 Aminotransferase class IV) Jul 2009
Protein Domains to toptop
Internal error getting result
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Automated Process Approved GO biological process GO:0009081 branched-chain amino acid metabolic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR005785
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0004084 branched-chain-amino-acid transaminase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR005785
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Approved name ilvE Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0012316
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Person Approved locus tag ECDH10B_3959 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu
Reference: Escherichia coli K-12 DH10B 		Feb 2008
Product
Person Approved product branched-chain amino-acid aminotransferase Published Annotation - PubMed ID: 16397293
Reference: Escherichia coli K-12 		Mar 2007
Protein Family
Automated Process Approved protein family IPR005785 Branched-chain amino acid aminotransferase I Protein Sequence Similarity - InterPro Domain: IPR005785
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR001544 Aminotransferase class IV Protein Sequence Similarity - InterPro Domain: IPR001544
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Other
Person Approved comment 100% identical to E. coli K-12 MG1655 feature ABE-0012316 Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0012316
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Gene Ontology
Automated Process Approved GO biological process GO:0009081 branched-chain amino acid metabolic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR005785
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0004084 branched-chain-amino-acid transaminase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR005785
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0000587 ilvE CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0000768 ilvE CDS
Ortholog
Automated Process Uncurated Go view Dickeya dadantii 3937 ABF-0014943 ilvE CDS
Automated Process Uncurated Go view Erwinia tasmaniensis Et1/99 [T] AFI-0000207 ilvE CDS
Automated Process Uncurated Go view Escherichia albertii TW07627 AFX-0001653 ilvE CDS
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0007935 ilvE CDS
Automated Process Uncurated Go view Escherichia coli 536 (UPEC) AEF-0004005 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0007279 ilvE CDS
Automated Process Uncurated Go view Escherichia coli APEC O1 (APEC) AEG-0003813 ilvE CDS
Automated Process Uncurated Go view Escherichia coli ATCC 8739 AEM-0010459 CDS
Automated Process Uncurated Go view Escherichia coli B171 (EPEC) ADN-0009586 ilvE CDS
Automated Process Uncurated Go view Escherichia coli B7A (ETEC) ADK-0006183 CDS
Automated Process Uncurated Go view Escherichia coli CFT073 (UPEC) ABR-0080883 ilvE CDS
Automated Process Uncurated Go view Escherichia coli E110019 (EPEC) ADM-0009730 ilvE CDS
Automated Process Uncurated Go view Escherichia coli E22 (EPEC) ADL-0010090 ilvE CDS
Automated Process Uncurated Go view Escherichia coli E2348/69 (EPEC) BCI-0004330 ilvE CDS
Automated Process Uncurated Go view Escherichia coli E24377A (ETEC) ADO-0008714 ilvE CDS
Automated Process Uncurated Go view Escherichia coli EC4024 (EHEC) BBI-0002582 CDS
Automated Process Uncurated Go view Escherichia coli EC4042 (EHEC) BBA-0008533 ilvE CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0007046 ilvE CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0007237 ilvE CDS
Automated Process Uncurated Go view Escherichia coli EC4113 (EHEC) BAY-0009831 ilvE CDS
Automated Process Uncurated Go view Escherichia coli EC4115 (EHEC) BAS-0010037 ilvE CDS
Automated Process Uncurated Go view Escherichia coli EC4196 (EHEC) BAX-0008288 ilvE CDS
Automated Process Uncurated Go view Escherichia coli EC4206 (EHEC) BAW-0007849 ilvE CDS
Automated Process Uncurated Go view Escherichia coli EC4401 (EHEC) BAV-0005635 ilvE CDS
Automated Process Uncurated Go view Escherichia coli EC4486 (EHEC) BAU-0007476 ilvE CDS
Automated Process Uncurated Go view Escherichia coli EC4501 (EHEC) BAT-0009708 ilvE CDS
Automated Process Uncurated Go view Escherichia coli EC508 (EHEC) BBJ-0008702 ilvE CDS
Automated Process Uncurated Go view Escherichia coli EC869 (EHEC) BBC-0006916 ilvE CDS
Automated Process Uncurated Go view Escherichia coli EDL933 (EHEC) ABH-0028907 ilvE CDS
Automated Process Uncurated Go view Escherichia coli F11 (UPEC) ADQ-0009679 ilvE CDS
Automated Process Uncurated Go view Escherichia coli HS ADR-0008673 ilvE CDS
Person Uncurated Go view Escherichia coli K-12 MG1655 ABE-0012316 ilvE CDS
Automated Process Uncurated Go view Escherichia coli K-12 W3110 ADY-0003584 ilvE CDS
Automated Process Uncurated Go view Escherichia coli SE11 AFS-0004131 CDS
Automated Process Uncurated Go view Escherichia coli SMS-3-5 AFT-0004132 ilvE CDS
Automated Process Uncurated Go view Escherichia coli Sakai (EHEC) ACA-0134788 ilvE CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0004740 CDS
Automated Process Uncurated Go view Escherichia coli UTI89 (UPEC) AEA-0004335 ilvE CDS
Automated Process Uncurated Go view Pectobacterium atrosepticum SCRI1043 ABL-0064558 ilvE CDS
Automated Process Uncurated Go view Pectobacterium brasiliensis 1692 AED-0002484 ilvE CDS
Automated Process Uncurated Go view Pectobacterium carotovorum WPP14 ADT-0001152 ilvE CDS
Automated Process Uncurated Go view Pectobacterium parmentieri WPP163 AFJ-0003469 ilvE CDS
Automated Process Uncurated Go view Salmonella Agona SL483 BBX-0008294 ilvE CDS
Automated Process Uncurated Go view Salmonella Arizonae CDC 346-86 BCD-0003931 CDS
Automated Process Uncurated Go view Salmonella Choleraesuis SC-B67 ADB-0004462 ilvE CDS
Automated Process Uncurated Go view Salmonella Dublin CT_02021853 BCB-0008537 ilvE CDS
Automated Process Uncurated Go view Salmonella Enteritidis P125109 BCF-0012246 ilvE CDS
Automated Process Uncurated Go view Salmonella Gallinarum 287/91 BCG-0010787 ilvE CDS
Automated Process Uncurated Go view Salmonella Hadar RI_05P066 BBT-0007649 ilvE CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL476 BBV-0008591 ilvE CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL486 BBW-0008530 ilvE CDS
Automated Process Uncurated Go view Salmonella Javiana GA_MM04042433 BCA-0007496 ilvE CDS
Automated Process Uncurated Go view Salmonella Kentucky CDC 191 BBZ-0008468 ilvE CDS
Automated Process Uncurated Go view Salmonella Kentucky CVM29188 BBP-0007682 ilvE CDS
Automated Process Uncurated Go view Salmonella Newport SL254 BBQ-0008538 ilvE CDS
Automated Process Uncurated Go view Salmonella Newport SL317 BBR-0008885 ilvE CDS
Automated Process Uncurated Go view Salmonella Paratyphi A AKU_12601 BCH-0003780 CDS
Automated Process Uncurated Go view Salmonella Paratyphi A ATCC 9150 ADA-0003740 ilvE CDS
Automated Process Uncurated Go view Salmonella Paratyphi B SPB7 BCC-0004868 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA23 BBN-0008712 ilvE CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA29 BBM-0008393 ilvE CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund CVM19633 BBO-0008180 ilvE CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund SL480 BBY-0007574 ilvE CDS
Automated Process Uncurated Go view Salmonella Typhi CT18 ABX-0112729 ilvE CDS
Automated Process Uncurated Go view Salmonella Typhi Ty2 ABS-0085117 ilvE CDS
Automated Process Uncurated Go view Salmonella Typhimurium LT2 [T] ABU-0102040 ilvE CDS
Automated Process Uncurated Go view Salmonella Virchow SL491 BBS-0005260 ilvE CDS
Automated Process Uncurated Go view Salmonella Weltevreden SL484 BBU-0009090 ilvE CDS
Automated Process Uncurated Go view Salmonella enterica CVM23701 BBL-0008643 ilvE CDS
Automated Process Uncurated Go view Shigella boydii 227 ADV-0004123 ilvE CDS
Automated Process Uncurated Go view Shigella boydii BS512 ADJ-0009568 ilvE CDS
Automated Process Uncurated Go view Shigella dysenteriae 1012 BAA-0007475 ilvE CDS
Automated Process Uncurated Go view Shigella dysenteriae 197 ADU-0004489 ilvE CDS
Automated Process Uncurated Go view Shigella flexneri 2457T ABQ-0075172 ilvE CDS
Automated Process Uncurated Go view Shigella flexneri 301 ABT-0090059 ilvE CDS
Automated Process Uncurated Go view Shigella flexneri 8401 BAG-0003963 ilvE CDS
Automated Process Uncurated Go view Shigella sonnei 046 ADD-0004294 ilvE CDS
Automated Process Uncurated Go view Yersinia bercovieri ATCC 43970 [T] AEK-0003171 CDS
Automated Process Uncurated Go view Yersinia enterocolitica 8081 BAH-0000475 ilvE CDS
Automated Process Uncurated Go view Yersinia frederiksenii ATCC 33641 [T] AEI-0003556 ilvE CDS
Automated Process Uncurated Go view Yersinia intermedia ATCC 29909 [T] AEH-0003599 ilvE CDS
Automated Process Uncurated Go view Yersinia mollaretii ATCC 43969 [T] AEJ-0003490 CDS
Automated Process Uncurated Go view Yersinia pestis 91001 (biovar Microtus) ACQ-0241819 ilvE CDS
Automated Process Uncurated Go view Yersinia pestis Angola (biovar Pestoides) ADI-0004589 ilvE CDS
Automated Process Uncurated Go view Yersinia pestis Antiqua (biovar Antiqua) BAE-0000159 ilvE CDS
Automated Process Uncurated Go view Yersinia pestis B42003004 (biovar Antiqua) BAL-0007697 ilvE CDS
Automated Process Uncurated Go view Yersinia pestis CA88-4125 (biovar Orientalis) BAF-0003486 ilvE CDS
Automated Process Uncurated Go view Yersinia pestis CO92 (biovar Orientalis) ABY-0128416 ilvE CDS
Automated Process Uncurated Go view Yersinia pestis E1979001 (biovar Antiqua) BAM-0005975 ilvE CDS
Automated Process Uncurated Go view Yersinia pestis F1991016 (biovar Orientalis) BAQ-0006425 ilvE CDS
Automated Process Uncurated Go view Yersinia pestis FV-1 (biovar Orientalis) BAK-0003604 CDS
Automated Process Uncurated Go view Yersinia pestis IP275 (biovar Orientalis) BAC-0009114 ilvE CDS
Automated Process Uncurated Go view Yersinia pestis K1973002 (biovar Mediaevalis) BAO-0007188 ilvE CDS
Automated Process Uncurated Go view Yersinia pestis KIM (biovar Mediaevalis) ABI-0029937 ilvE CDS
Automated Process Uncurated Go view Yersinia pestis MG05-1020 (biovar Orientalis) BAP-0006872 ilvE CDS
Automated Process Uncurated Go view Yersinia pestis Nepal516 (biovar Antiqua) BAD-0000091 ilvE CDS
Automated Process Uncurated Go view Yersinia pestis Pestoides F (biovar Pestoides) BAI-0004212 CDS
Automated Process Uncurated Go view Yersinia pestis UG05-0454 (biovar Antiqua) BAN-0008355 ilvE CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP31758 ADS-0004087 ilvE CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP32953 ACZ-0000150 ilvE CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis PB1/+ AFV-0000168 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis YPIII AFW-0004820 CDS
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 4044427 to 4055356
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
AEC-0000001sourceforward14686137Contains
AEC-0004034hdfRCDScomplement40440714044910Upstream
AEC-0003498yifECDSforward40450294045367Upstream
AEC-0003499yifBCDScomplement40453924046942Upstream
AEC-0003500ilvLCDSforward40472654047363Upstream
AEC-0003501ilvG_1CDSforward40475034048486Upstream
AEC-0003502ilvG_2CDSforward40485664049147Upstream
AEC-0003503ilvMCDSforward40491444049407Upstream
AEC-0003504ilvECDSforward40494274050356Matches
AEC-0003505ilvACDSforward40522744053818Downstream
AEC-0003506ilvYCDScomplement40538704054763Downstream
AEC-0003507ilvCCDSforward40549134056388Downstream
Release Notes to toptop
submitted to GenBank; assigned accession number CP000948