Escherichia coli K-12 DH10B
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Working With: Genome: Escherichia coli K-12 DH10B Version: 10

AEC-0003507 (ilvC) - Escherichia coli K-12 DH10B - Feature Annotation

ASAP ID
AEC-0003507 showshow history
Names
ilvC ECDH10B_3963
Product
ketol-acid reductoisomerase, NAD(P)-binding
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome forward 4054913 4056388 1476 492
Sequence

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Context

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Pre-Run Search Results
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InterProScan
BLASTP
Protein Families to toptop
Author Approval Family Annotated
Automated Process Approved IPR014359 (IPR014359 Ketol-acid reductoisomerase, prokaryotic) Jul 2009
Automated Process Approved IPR013023 (IPR013023 Ketol-acid reductoisomerase) Jul 2009
Automated Process Approved IPR016040 (IPR016040 NAD(P)-binding domain) Jul 2009
Automated Process Approved IPR008927 (IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily) Jul 2009
Automated Process Approved IPR013116 (IPR013116 Ketol-acid reductoisomerase, N-terminal) Jul 2009
Automated Process Approved IPR000506 (IPR000506 Ketol-acid reductoisomerase, C-terminal) Jul 2009
Protein Domains to toptop
Internal error getting result
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Automated Process Approved GO biological process GO:0009082 branched-chain amino acid biosynthetic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR014359
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO biological process GO:0008652 cellular amino acid biosynthetic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR013116
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO biological process GO:0008152 metabolic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR016040
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0005488 binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR016040
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0003824 catalytic activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR016040
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0004455 ketol-acid reductoisomerase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR014359
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0050661 NADP binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR014359
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0016491 oxidoreductase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR013023
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Approved name ilvC Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0012331
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Person Approved locus tag ECDH10B_3963 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu
Reference: Escherichia coli K-12 DH10B 		Feb 2008
Product
Person Approved product ketol-acid reductoisomerase, NAD(P)-binding Published Annotation - PubMed ID: 16397293
Reference: Escherichia coli K-12 		Mar 2007
Protein Family
Automated Process Approved protein family IPR013023 Ketol-acid reductoisomerase Protein Sequence Similarity - InterPro Domain: IPR013023
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR014359 Ketol-acid reductoisomerase, prokaryotic Protein Sequence Similarity - InterPro Domain: IPR014359
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR016040 NAD(P)-binding domain Protein Sequence Similarity - InterPro Domain: IPR016040
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily Protein Sequence Similarity - InterPro Domain: IPR008927
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR000506 Ketol-acid reductoisomerase, C-terminal Protein Sequence Similarity - InterPro Domain: IPR000506
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR013116 Ketol-acid reductoisomerase, N-terminal Protein Sequence Similarity - InterPro Domain: IPR013116
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Other
Person Approved comment 100% identical to E. coli K-12 MG1655 feature ABE-0012331 Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0012331
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Gene Ontology
Automated Process Approved GO biological process GO:0008152 metabolic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR016040
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO biological process GO:0008652 cellular amino acid biosynthetic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR013116
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO biological process GO:0009082 branched-chain amino acid biosynthetic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR014359
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0050661 NADP binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR014359
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0004455 ketol-acid reductoisomerase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR014359
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0003824 catalytic activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR016040
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0005488 binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR016040
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0016491 oxidoreductase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR013023
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0000283 ilvC CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0000434 ilvC CDS
Ortholog
Automated Process Uncurated Go view Dickeya dadantii 3937 ABF-0014951 ilvC CDS
Automated Process Uncurated Go view Erwinia tasmaniensis Et1/99 [T] AFI-0000211 ilvC CDS
Automated Process Uncurated Go view Escherichia albertii TW07627 AFX-0001666 ilvC CDS
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0007931 ilvC CDS
Automated Process Uncurated Go view Escherichia coli 536 (UPEC) AEF-0004009 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0007275 ilvC CDS
Automated Process Uncurated Go view Escherichia coli APEC O1 (APEC) AEG-0003817 ilvC CDS
Automated Process Uncurated Go view Escherichia coli ATCC 8739 AEM-0010455 CDS
Automated Process Uncurated Go view Escherichia coli B171 (EPEC) ADN-0009582 ilvC CDS
Automated Process Uncurated Go view Escherichia coli B7A (ETEC) ADK-0006187 CDS
Automated Process Uncurated Go view Escherichia coli CFT073 (UPEC) ABR-0080887 ilvC CDS
Automated Process Uncurated Go view Escherichia coli E110019 (EPEC) ADM-0009734 ilvC CDS
Automated Process Uncurated Go view Escherichia coli E22 (EPEC) ADL-0010094 ilvC CDS
Automated Process Uncurated Go view Escherichia coli E2348/69 (EPEC) BCI-0004334 ilvC CDS
Automated Process Uncurated Go view Escherichia coli E24377A (ETEC) ADO-0008718 ilvC CDS
Automated Process Uncurated Go view Escherichia coli EC4024 (EHEC) BBI-0002586 CDS
Automated Process Uncurated Go view Escherichia coli EC4042 (EHEC) BBA-0008537 ilvC CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0007050 ilvC CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0007241 ilvC CDS
Automated Process Uncurated Go view Escherichia coli EC4113 (EHEC) BAY-0009835 ilvC CDS
Automated Process Uncurated Go view Escherichia coli EC4115 (EHEC) BAS-0010041 ilvC CDS
Automated Process Uncurated Go view Escherichia coli EC4196 (EHEC) BAX-0008284 ilvC CDS
Automated Process Uncurated Go view Escherichia coli EC4206 (EHEC) BAW-0007853 ilvC CDS
Automated Process Uncurated Go view Escherichia coli EC4401 (EHEC) BAV-0005639 ilvC CDS
Automated Process Uncurated Go view Escherichia coli EC4486 (EHEC) BAU-0007480 ilvC CDS
Automated Process Uncurated Go view Escherichia coli EC4501 (EHEC) BAT-0009704 ilvC CDS
Automated Process Uncurated Go view Escherichia coli EC508 (EHEC) BBJ-0008706 ilvC CDS
Automated Process Uncurated Go view Escherichia coli EC869 (EHEC) BBC-0006920 ilvC CDS
Automated Process Uncurated Go view Escherichia coli EDL933 (EHEC) ABH-0028911 ilvC CDS
Automated Process Uncurated Go view Escherichia coli F11 (UPEC) ADQ-0009683 ilvC CDS
Automated Process Uncurated Go view Escherichia coli HS ADR-0008677 ilvC CDS
Person Uncurated Go view Escherichia coli K-12 MG1655 ABE-0012331 ilvC CDS
Automated Process Uncurated Go view Escherichia coli K-12 W3110 ADY-0003580 ilvC CDS
Automated Process Uncurated Go view Escherichia coli SE11 AFS-0004135 CDS
Automated Process Uncurated Go view Escherichia coli SMS-3-5 AFT-0004136 ilvC CDS
Automated Process Uncurated Go view Escherichia coli Sakai (EHEC) ACA-0134792 ilvC CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0004744 CDS
Automated Process Uncurated Go view Escherichia coli UTI89 (UPEC) AEA-0004339 ilvC CDS
Automated Process Uncurated Go view Pectobacterium atrosepticum SCRI1043 ABL-0064552 ilvC CDS
Automated Process Uncurated Go view Pectobacterium brasiliensis 1692 AED-0002507 ilvC CDS
Automated Process Uncurated Go view Pectobacterium carotovorum WPP14 ADT-0001148 ilvC CDS
Automated Process Uncurated Go view Pectobacterium parmentieri WPP163 AFJ-0003462 ilvC CDS
Automated Process Uncurated Go view Salmonella Agona SL483 BBX-0008300 CDS
Automated Process Uncurated Go view Salmonella Arizonae CDC 346-86 BCD-0003927 CDS
Automated Process Uncurated Go view Salmonella Choleraesuis SC-B67 ADB-0004468 ilvC CDS
Automated Process Uncurated Go view Salmonella Dublin CT_02021853 BCB-0008543 CDS
Automated Process Uncurated Go view Salmonella Enteritidis P125109 BCF-0012266 ilvC CDS
Automated Process Uncurated Go view Salmonella Gallinarum 287/91 BCG-0010767 ilvC CDS
Automated Process Uncurated Go view Salmonella Hadar RI_05P066 BBT-0007643 CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL476 BBV-0008597 CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL486 BBW-0008536 CDS
Automated Process Uncurated Go view Salmonella Javiana GA_MM04042433 BCA-0007502 CDS
Automated Process Uncurated Go view Salmonella Kentucky CDC 191 BBZ-0008474 ilvC CDS
Automated Process Uncurated Go view Salmonella Kentucky CVM29188 BBP-0007688 ilvC CDS
Automated Process Uncurated Go view Salmonella Newport SL254 BBQ-0008544 CDS
Automated Process Uncurated Go view Salmonella Newport SL317 BBR-0008879 ilvC CDS
Automated Process Uncurated Go view Salmonella Paratyphi A AKU_12601 BCH-0003786 CDS
Automated Process Uncurated Go view Salmonella Paratyphi A ATCC 9150 ADA-0003746 ilvC CDS
Automated Process Uncurated Go view Salmonella Paratyphi B SPB7 BCC-0004874 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA23 BBN-0008718 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA29 BBM-0008387 CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund CVM19633 BBO-0008186 CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund SL480 BBY-0007580 CDS
Automated Process Uncurated Go view Salmonella Typhi CT18 ABX-0112712 ilvC CDS
Automated Process Uncurated Go view Salmonella Typhi Ty2 ABS-0085111 ilvC CDS
Automated Process Uncurated Go view Salmonella Typhimurium LT2 [T] ABU-0102064 ilvC CDS
Automated Process Uncurated Go view Salmonella Virchow SL491 BBS-0005254 ilvC CDS
Automated Process Uncurated Go view Salmonella Weltevreden SL484 BBU-0009096 CDS
Automated Process Uncurated Go view Salmonella enterica CVM23701 BBL-0008649 CDS
Automated Process Uncurated Go view Shigella boydii 227 ADV-0004127 ilvC CDS
Automated Process Uncurated Go view Shigella boydii BS512 ADJ-0009564 ilvC CDS
Automated Process Uncurated Go view Shigella dysenteriae 1012 BAA-0007471 ilvC CDS
Automated Process Uncurated Go view Shigella dysenteriae 197 ADU-0004485 ilvC CDS
Automated Process Uncurated Go view Shigella flexneri 2457T ABQ-0075168 ilvC CDS
Automated Process Uncurated Go view Shigella flexneri 301 ABT-0090063 ilvC CDS
Automated Process Uncurated Go view Shigella flexneri 8401 BAG-0003959 ilvC CDS
Automated Process Uncurated Go view Shigella sonnei 046 ADD-0004298 ilvC CDS
Automated Process Uncurated Go view Yersinia bercovieri ATCC 43970 [T] AEK-0003177 CDS
Automated Process Uncurated Go view Yersinia enterocolitica 8081 BAH-0000495 ilvC CDS
Automated Process Uncurated Go view Yersinia frederiksenii ATCC 33641 [T] AEI-0003551 ilvC CDS
Automated Process Uncurated Go view Yersinia intermedia ATCC 29909 [T] AEH-0003603 ilvC CDS
Automated Process Uncurated Go view Yersinia mollaretii ATCC 43969 [T] AEJ-0003146 CDS
Automated Process Uncurated Go view Yersinia pestis 91001 (biovar Microtus) ACQ-0241831 ilvC CDS
Automated Process Uncurated Go view Yersinia pestis Angola (biovar Pestoides) ADI-0004598 ilvC CDS
Automated Process Uncurated Go view Yersinia pestis Antiqua (biovar Antiqua) BAE-0000169 ilvC CDS
Automated Process Uncurated Go view Yersinia pestis B42003004 (biovar Antiqua) BAL-0007688 ilvC CDS
Automated Process Uncurated Go view Yersinia pestis CA88-4125 (biovar Orientalis) BAF-0003496 ilvC CDS
Automated Process Uncurated Go view Yersinia pestis CO92 (biovar Orientalis) ABY-0128387 ilvC CDS
Automated Process Uncurated Go view Yersinia pestis E1979001 (biovar Antiqua) BAM-0005984 ilvC CDS
Automated Process Uncurated Go view Yersinia pestis F1991016 (biovar Orientalis) BAQ-0006434 ilvC CDS
Automated Process Uncurated Go view Yersinia pestis IP275 (biovar Orientalis) BAC-0009105 ilvC CDS
Automated Process Uncurated Go view Yersinia pestis K1973002 (biovar Mediaevalis) BAO-0007197 ilvC CDS
Automated Process Uncurated Go view Yersinia pestis KIM (biovar Mediaevalis) ABI-0029945 ilvC CDS
Automated Process Uncurated Go view Yersinia pestis MG05-1020 (biovar Orientalis) BAP-0006881 ilvC CDS
Automated Process Uncurated Go view Yersinia pestis Nepal516 (biovar Antiqua) BAD-0000102 ilvC CDS
Automated Process Uncurated Go view Yersinia pestis Pestoides F (biovar Pestoides) BAI-0004200 CDS
Automated Process Uncurated Go view Yersinia pestis UG05-0454 (biovar Antiqua) BAN-0008347 ilvC CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP31758 ADS-0004094 ilvC CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP32953 ACZ-0000159 ilvC CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis PB1/+ AFV-0000179 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis YPIII AFW-0004812 CDS
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 4049913 to 4061388
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
AEC-0000001sourceforward14686137Contains
AEC-0003504ilvECDSforward40494274050356Upstream
AEC-0003505ilvACDSforward40522744053818Upstream
AEC-0003506ilvYCDScomplement40538704054763Upstream
AEC-0003507ilvCCDSforward40549134056388Matches
AEC-0003508ppiCCDScomplement40564754056756Downstream
AEC-0003509yifN_2CDSpcomplement40569554057230Downstream
AEC-0004521yifNpseudogenecomplement40569554057403Downstream
AEC-0003510yifN_1CDSpcomplement40571854057403Downstream
AEC-0003511repCDSforward40576204059641Downstream
AEC-0003512gppCDScomplement40596884061172Downstream
AEC-0003513rhlBCDScomplement40613084062573Downstream
Release Notes to toptop
submitted to GenBank; assigned accession number CP000948