Escherichia coli K-12 DH10B
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Working With: Genome: Escherichia coli K-12 DH10B Version: 10

AEC-0003625 (fieF) - Escherichia coli K-12 DH10B - Feature Annotation

ASAP ID
AEC-0003625 showshow history
Names
fieF ECDH10B_4104
Product
zinc transporter
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome forward 4204189 4205091 903 301
Sequence

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Context

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Pre-Run Search Results
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InterProScan
BLASTP
Protein Families to toptop
Author Approval Family Annotated
Automated Process Approved IPR002524 (IPR002524 Cation efflux protein) Jul 2009
Automated Process Approved IPR016040 (IPR016040 NAD(P)-binding domain) Jul 2009
Protein Domains to toptop
Internal error getting result
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Automated Process Approved GO biological process GO:0008152 metabolic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR016040
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO biological process GO:0006812 cation transport GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR002524
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO cellular component GO:0016020 membrane GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR002524
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0005488 binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR016040
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0003824 catalytic activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR016040
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0008324 cation transmembrane transporter activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR002524
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Approved name fieF Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0012786
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Person Approved locus tag ECDH10B_4104 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu
Reference: Escherichia coli K-12 DH10B 		Feb 2008
Product
Person Approved product zinc transporter Published Annotation - PubMed ID: 16397293
Reference: Escherichia coli K-12 		Mar 2007
Protein Family
Automated Process Approved protein family IPR002524 Cation efflux protein Protein Sequence Similarity - InterPro Domain: IPR002524
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR016040 NAD(P)-binding domain Protein Sequence Similarity - InterPro Domain: IPR016040
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Other
Person Approved comment 100% identical to E. coli K-12 MG1655 feature ABE-0012786 Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0012786
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Gene Ontology
Automated Process Approved GO biological process GO:0008152 metabolic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR016040
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO biological process GO:0006812 cation transport GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR002524
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO cellular component GO:0016020 membrane GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR002524
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0005488 binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR016040
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0008324 cation transmembrane transporter activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR002524
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0003824 catalytic activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR016040
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0001237 fieF CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0000118 fieF CDS
Ortholog
Automated Process Uncurated Go view Dickeya dadantii 3937 ABF-0020381 fieF CDS
Automated Process Uncurated Go view Erwinia tasmaniensis Et1/99 [T] AFI-0000102 fieF CDS
Automated Process Uncurated Go view Escherichia albertii TW07627 AFX-0001845 fieF CDS
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0007550 fieF CDS
Automated Process Uncurated Go view Escherichia coli 536 (UPEC) AEF-0004169 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0007075 fieF CDS
Automated Process Uncurated Go view Escherichia coli APEC O1 (APEC) AEG-0003976 fieF CDS
Automated Process Uncurated Go view Escherichia coli ATCC 8739 AEM-0010305 CDS
Automated Process Uncurated Go view Escherichia coli B171 (EPEC) ADN-0006913 fieF CDS
Automated Process Uncurated Go view Escherichia coli B7A (ETEC) ADK-0006609 CDS
Automated Process Uncurated Go view Escherichia coli CFT073 (UPEC) ABR-0081064 fieF CDS
Automated Process Uncurated Go view Escherichia coli E110019 (EPEC) ADM-0006389 fieF CDS
Automated Process Uncurated Go view Escherichia coli E22 (EPEC) ADL-0007639 fieF CDS
Automated Process Uncurated Go view Escherichia coli E2348/69 (EPEC) BCI-0004490 fieF CDS
Automated Process Uncurated Go view Escherichia coli E24377A (ETEC) ADO-0008883 fieF CDS
Automated Process Uncurated Go view Escherichia coli EC4024 (EHEC) BBI-0001153 CDS
Automated Process Uncurated Go view Escherichia coli EC4042 (EHEC) BBA-0008699 fieF CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0007212 fieF CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0007403 fieF CDS
Automated Process Uncurated Go view Escherichia coli EC4113 (EHEC) BAY-0006925 fieF CDS
Automated Process Uncurated Go view Escherichia coli EC4115 (EHEC) BAS-0010201 fieF CDS
Automated Process Uncurated Go view Escherichia coli EC4196 (EHEC) BAX-0007884 fieF CDS
Automated Process Uncurated Go view Escherichia coli EC4206 (EHEC) BAW-0008015 fieF CDS
Automated Process Uncurated Go view Escherichia coli EC4401 (EHEC) BAV-0007559 fieF CDS
Automated Process Uncurated Go view Escherichia coli EC4486 (EHEC) BAU-0007642 fieF CDS
Automated Process Uncurated Go view Escherichia coli EC4501 (EHEC) BAT-0007290 fieF CDS
Automated Process Uncurated Go view Escherichia coli EC508 (EHEC) BBJ-0007241 fieF CDS
Automated Process Uncurated Go view Escherichia coli EC869 (EHEC) BBC-0007085 fieF CDS
Automated Process Uncurated Go view Escherichia coli EDL933 (EHEC) ABH-0029065 fieF CDS
Automated Process Uncurated Go view Escherichia coli F11 (UPEC) ADQ-0007779 fieF CDS
Automated Process Uncurated Go view Escherichia coli HS ADR-0008830 fieF CDS
Person Uncurated Go view Escherichia coli K-12 MG1655 ABE-0012786 fieF CDS
Automated Process Uncurated Go view Escherichia coli K-12 W3110 ADY-0003439 fieF CDS
Automated Process Uncurated Go view Escherichia coli SE11 AFS-0004290 CDS
Automated Process Uncurated Go view Escherichia coli SMS-3-5 AFT-0004350 fieF CDS
Automated Process Uncurated Go view Escherichia coli Sakai (EHEC) ACA-0134937 fieF CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0001748 CDS
Automated Process Uncurated Go view Escherichia coli UTI89 (UPEC) AEA-0004507 yiiP CDS
Automated Process Uncurated Go view Pectobacterium atrosepticum SCRI1043 ABL-0064646 fieF CDS
Automated Process Uncurated Go view Pectobacterium brasiliensis 1692 AED-0002556 cepA CDS
Automated Process Uncurated Go view Pectobacterium carotovorum WPP14 ADT-0002267 cepA CDS
Automated Process Uncurated Go view Pectobacterium parmentieri WPP163 AFJ-0000687 fieF CDS
Automated Process Uncurated Go view Salmonella Agona SL483 BBX-0008471 fieF CDS
Automated Process Uncurated Go view Salmonella Arizonae CDC 346-86 BCD-0003754 CDS
Automated Process Uncurated Go view Salmonella Choleraesuis SC-B67 ADB-0004640 fieF CDS
Automated Process Uncurated Go view Salmonella Dublin CT_02021853 BCB-0008701 fieF CDS
Automated Process Uncurated Go view Salmonella Enteritidis P125109 BCF-0012714 yiiP CDS
Automated Process Uncurated Go view Salmonella Gallinarum 287/91 BCG-0010228 yiiP CDS
Automated Process Uncurated Go view Salmonella Hadar RI_05P066 BBT-0007487 fieF CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL476 BBV-0008748 fieF CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL486 BBW-0007826 fieF CDS
Automated Process Uncurated Go view Salmonella Javiana GA_MM04042433 BCA-0007662 fieF CDS
Automated Process Uncurated Go view Salmonella Kentucky CDC 191 BBZ-0007357 fieF CDS
Automated Process Uncurated Go view Salmonella Kentucky CVM29188 BBP-0007859 fieF CDS
Automated Process Uncurated Go view Salmonella Newport SL254 BBQ-0008739 fieF CDS
Automated Process Uncurated Go view Salmonella Newport SL317 BBR-0008643 fieF CDS
Automated Process Uncurated Go view Salmonella Paratyphi A AKU_12601 BCH-0003943 CDS
Automated Process Uncurated Go view Salmonella Paratyphi A ATCC 9150 ADA-0003901 fieF CDS
Automated Process Uncurated Go view Salmonella Paratyphi B SPB7 BCC-0005054 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA23 BBN-0008883 fieF CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA29 BBM-0006694 fieF CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund CVM19633 BBO-0008342 fieF CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund SL480 BBY-0006934 fieF CDS
Automated Process Uncurated Go view Salmonella Typhi CT18 ABX-0113041 fieF CDS
Automated Process Uncurated Go view Salmonella Typhi Ty2 ABS-0085282 fieF CDS
Automated Process Uncurated Go view Salmonella Typhimurium LT2 [T] ABU-0102515 fieF CDS
Automated Process Uncurated Go view Salmonella Virchow SL491 BBS-0005096 fieF CDS
Automated Process Uncurated Go view Salmonella Weltevreden SL484 BBU-0007833 CDS
Automated Process Uncurated Go view Salmonella enterica CVM23701 BBL-0005944 fieF CDS
Automated Process Uncurated Go view Shigella boydii 227 ADV-0004286 yiiP CDS
Automated Process Uncurated Go view Shigella boydii BS512 ADJ-0009811 fieF CDS
Automated Process Uncurated Go view Shigella dysenteriae 1012 BAA-0005815 fieF CDS
Automated Process Uncurated Go view Shigella dysenteriae 197 ADU-0004330 yiiP CDS
Automated Process Uncurated Go view Shigella flexneri 2457T ABQ-0074989 fieF CDS
Automated Process Uncurated Go view Shigella flexneri 301 ABT-0090210 fieF CDS
Automated Process Uncurated Go view Shigella flexneri 8401 BAG-0003802 yiiP CDS
Automated Process Uncurated Go view Shigella sonnei 046 ADD-0004446 fieF CDS
Automated Process Uncurated Go view Yersinia bercovieri ATCC 43970 [T] AEK-0001345 CDS
Automated Process Uncurated Go view Yersinia enterocolitica 8081 BAH-0000276 CDS
Automated Process Uncurated Go view Yersinia frederiksenii ATCC 33641 [T] AEI-0003184 fieF_1 CDS
Automated Process Uncurated Go view Yersinia intermedia ATCC 29909 [T] AEH-0002793 fieF CDS
Automated Process Uncurated Go view Yersinia mollaretii ATCC 43969 [T] AEJ-0003699 CDS
Automated Process Uncurated Go view Yersinia pestis 91001 (biovar Microtus) ACQ-0234398 fieF CDS
Automated Process Uncurated Go view Yersinia pestis Angola (biovar Pestoides) ADI-0004191 fieF CDS
Automated Process Uncurated Go view Yersinia pestis Antiqua (biovar Antiqua) BAE-0004132 fieF CDS
Automated Process Uncurated Go view Yersinia pestis B42003004 (biovar Antiqua) BAL-0007769 fieF CDS
Automated Process Uncurated Go view Yersinia pestis CA88-4125 (biovar Orientalis) BAF-0003213 fieF CDS
Automated Process Uncurated Go view Yersinia pestis CO92 (biovar Orientalis) ABY-0115566 fieF CDS
Automated Process Uncurated Go view Yersinia pestis E1979001 (biovar Antiqua) BAM-0007903 fieF CDS
Automated Process Uncurated Go view Yersinia pestis F1991016 (biovar Orientalis) BAQ-0006244 fieF CDS
Automated Process Uncurated Go view Yersinia pestis FV-1 (biovar Orientalis) BAK-0000961 CDS
Automated Process Uncurated Go view Yersinia pestis IP275 (biovar Orientalis) BAC-0005468 fieF CDS
Automated Process Uncurated Go view Yersinia pestis K1973002 (biovar Mediaevalis) BAO-0007984 fieF CDS
Automated Process Uncurated Go view Yersinia pestis KIM (biovar Mediaevalis) ABI-0029646 fieF CDS
Automated Process Uncurated Go view Yersinia pestis MG05-1020 (biovar Orientalis) BAP-0005062 fieF CDS
Automated Process Uncurated Go view Yersinia pestis Nepal516 (biovar Antiqua) BAD-0004531 fieF CDS
Automated Process Uncurated Go view Yersinia pestis Pestoides F (biovar Pestoides) BAI-0004597 CDS
Automated Process Uncurated Go view Yersinia pestis UG05-0454 (biovar Antiqua) BAN-0004379 fieF CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP31758 ADS-0004015 fieF CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP32953 ACZ-0000080 fieF CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis PB1/+ AFV-0000086 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis YPIII AFW-0004899 CDS
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 4199189 to 4210091
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
AEC-0000001sourceforward14686137Contains
AEC-0003621kdgTCDSforward41994104200393Upstream
AEC-0003622yiiMCDSforward42005424201216Upstream
AEC-0003623cpxACDScomplement42013224202695Upstream
AEC-0003624cpxRCDScomplement42026924203390Upstream
AEC-0004042cpxPCDSforward42035404204040Upstream
AEC-0003625fieFCDSforward42041894205091Matches
AEC-0003626pfkACDSforward42052724206234Downstream
AEC-0003627sbpCDSforward42065544207543Downstream
AEC-0003628cdhCDSforward42076504208405Downstream
AEC-0003629tpiACDScomplement42084604209227Downstream
AEC-0003630yiiQCDScomplement42093354209934Downstream
AEC-0003631yiiRCDSforward42100354210475Downstream
Release Notes to toptop
submitted to GenBank; assigned accession number CP000948