Escherichia coli K-12 DH10B
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Working With: Genome: Escherichia coli K-12 DH10B Version: 10

AEC-0003650 (metL) - Escherichia coli K-12 DH10B - Feature Annotation

ASAP ID
AEC-0003650 showshow history
Names
metL ECDH10B_4129
Product
fused aspartokinase II; homoserine dehydrogenase II
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome forward 4227555 4229987 2433 811
Sequence

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Context

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Pre-Run Search Results
Search Database View Results
InterProScan
BLASTP
Protein Families to toptop
Author Approval Family Annotated
Automated Process Approved IPR001341 (IPR001341 Aspartate kinase) Jul 2009
Automated Process Approved IPR001048 (IPR001048 Aspartate/glutamate/uridylate kinase) Jul 2009
Automated Process Approved IPR016040 (IPR016040 NAD(P)-binding domain) Jul 2009
Automated Process Approved IPR011147 (IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I) Jul 2009
Automated Process Approved IPR005106 (IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding) Jul 2009
Automated Process Approved IPR001342 (IPR001342 Homoserine dehydrogenase, catalytic) Jul 2009
Protein Domains to toptop
Internal error getting result
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Automated Process Approved GO biological process GO:0008652 cellular amino acid biosynthetic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001341
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO biological process GO:0009067 aspartate family amino acid biosynthetic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR011147
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO biological process GO:0008152 metabolic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR016040
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0016491 oxidoreductase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR005106
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0050661 NADP binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR005106
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0004412 homoserine dehydrogenase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR011147
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0003824 catalytic activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR016040
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0004072 aspartate kinase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001341
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0005488 binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR016040
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Approved name metL Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0012889
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Person Approved locus tag ECDH10B_4129 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu
Reference: Escherichia coli K-12 DH10B 		Feb 2008
Product
Person Approved product fused aspartokinase II; homoserine dehydrogenase II Published Annotation - PubMed ID: 16397293
Reference: Escherichia coli K-12 		Mar 2007
Protein Family
Automated Process Approved protein family IPR001048 Aspartate/glutamate/uridylate kinase Protein Sequence Similarity - InterPro Domain: IPR001048
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR001341 Aspartate kinase Protein Sequence Similarity - InterPro Domain: IPR001341
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR016040 NAD(P)-binding domain Protein Sequence Similarity - InterPro Domain: IPR016040
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR001342 Homoserine dehydrogenase, catalytic Protein Sequence Similarity - InterPro Domain: IPR001342
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding Protein Sequence Similarity - InterPro Domain: IPR005106
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I Protein Sequence Similarity - InterPro Domain: IPR011147
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Other
Person Approved comment 100% identical to E. coli K-12 MG1655 feature ABE-0012889 Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0012889
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Gene Ontology
Automated Process Approved GO biological process GO:0008652 cellular amino acid biosynthetic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001341
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO biological process GO:0008152 metabolic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR016040
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO biological process GO:0009067 aspartate family amino acid biosynthetic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR011147
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0003824 catalytic activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR016040
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0004072 aspartate kinase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001341
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0004412 homoserine dehydrogenase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR011147
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0050661 NADP binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR005106
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0016491 oxidoreductase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR005106
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0005488 binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR016040
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0001144 metL CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0000979 metL CDS
Ortholog
Automated Process Uncurated Go view Dickeya dadantii 3937 ABF-0020416 metL CDS
Automated Process Uncurated Go view Erwinia tasmaniensis Et1/99 [T] AFI-0000133 metL CDS
Automated Process Uncurated Go view Escherichia albertii TW07627 AFX-0001879 CDS
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0007523 metL CDS
Automated Process Uncurated Go view Escherichia coli 536 (UPEC) AEF-0004194 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0007049 metL CDS
Automated Process Uncurated Go view Escherichia coli APEC O1 (APEC) AEG-0003999 metL CDS
Automated Process Uncurated Go view Escherichia coli ATCC 8739 AEM-0010272 CDS
Automated Process Uncurated Go view Escherichia coli B171 (EPEC) ADN-0009139 metL CDS
Automated Process Uncurated Go view Escherichia coli B7A (ETEC) ADK-0009422 CDS
Automated Process Uncurated Go view Escherichia coli CFT073 (UPEC) ABR-0081091 metL CDS
Automated Process Uncurated Go view Escherichia coli E110019 (EPEC) ADM-0006418 metL CDS
Automated Process Uncurated Go view Escherichia coli E22 (EPEC) ADL-0007609 metL CDS
Automated Process Uncurated Go view Escherichia coli E2348/69 (EPEC) BCI-0004515 metL CDS
Automated Process Uncurated Go view Escherichia coli E24377A (ETEC) ADO-0008914 metL CDS
Automated Process Uncurated Go view Escherichia coli EC4024 (EHEC) BBI-0001187 CDS
Automated Process Uncurated Go view Escherichia coli EC4042 (EHEC) BBA-0008730 metL CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0007243 metL CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0007434 metL CDS
Automated Process Uncurated Go view Escherichia coli EC4113 (EHEC) BAY-0006894 metL CDS
Automated Process Uncurated Go view Escherichia coli EC4115 (EHEC) BAS-0010232 metL CDS
Automated Process Uncurated Go view Escherichia coli EC4196 (EHEC) BAX-0007854 metL CDS
Automated Process Uncurated Go view Escherichia coli EC4206 (EHEC) BAW-0008047 metL CDS
Automated Process Uncurated Go view Escherichia coli EC4401 (EHEC) BAV-0007592 metL CDS
Automated Process Uncurated Go view Escherichia coli EC4486 (EHEC) BAU-0007673 metL CDS
Automated Process Uncurated Go view Escherichia coli EC4501 (EHEC) BAT-0007260 metL CDS
Automated Process Uncurated Go view Escherichia coli EC508 (EHEC) BBJ-0007210 metL CDS
Automated Process Uncurated Go view Escherichia coli EC869 (EHEC) BBC-0007115 metL CDS
Automated Process Uncurated Go view Escherichia coli EDL933 (EHEC) ABH-0029101 metL CDS
Automated Process Uncurated Go view Escherichia coli F11 (UPEC) ADQ-0007804 metL CDS
Automated Process Uncurated Go view Escherichia coli HS ADR-0008859 metL CDS
Person Uncurated Go view Escherichia coli K-12 MG1655 ABE-0012889 metL CDS
Automated Process Uncurated Go view Escherichia coli K-12 W3110 ADY-0003414 metL CDS
Automated Process Uncurated Go view Escherichia coli SE11 AFS-0004321 CDS
Automated Process Uncurated Go view Escherichia coli SMS-3-5 AFT-0004377 metL CDS
Automated Process Uncurated Go view Escherichia coli Sakai (EHEC) ACA-0134967 metL CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0001781 CDS
Automated Process Uncurated Go view Escherichia coli UTI89 (UPEC) AEA-0004534 metL CDS
Automated Process Uncurated Go view Pectobacterium atrosepticum SCRI1043 ABL-0064588 metL CDS
Automated Process Uncurated Go view Pectobacterium brasiliensis 1692 AED-0002541 metL CDS
Automated Process Uncurated Go view Pectobacterium carotovorum WPP14 ADT-0002258 metL CDS
Automated Process Uncurated Go view Pectobacterium parmentieri WPP163 AFJ-0000645 metL CDS
Automated Process Uncurated Go view Salmonella Agona SL483 BBX-0008512 metL CDS
Automated Process Uncurated Go view Salmonella Arizonae CDC 346-86 BCD-0003727 CDS
Automated Process Uncurated Go view Salmonella Choleraesuis SC-B67 ADB-0004686 metL CDS
Automated Process Uncurated Go view Salmonella Dublin CT_02021853 BCB-0008744 metL CDS
Automated Process Uncurated Go view Salmonella Enteritidis P125109 BCF-0012850 metL CDS
Automated Process Uncurated Go view Salmonella Gallinarum 287/91 BCG-0010099 metL CDS
Automated Process Uncurated Go view Salmonella Hadar RI_05P066 BBT-0007444 metL CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL476 BBV-0008791 metL CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL486 BBW-0007782 metL CDS
Automated Process Uncurated Go view Salmonella Javiana GA_MM04042433 BCA-0007703 metL CDS
Automated Process Uncurated Go view Salmonella Kentucky CDC 191 BBZ-0007401 metL CDS
Automated Process Uncurated Go view Salmonella Kentucky CVM29188 BBP-0007903 metL CDS
Automated Process Uncurated Go view Salmonella Newport SL254 BBQ-0008781 metL CDS
Automated Process Uncurated Go view Salmonella Newport SL317 BBR-0008686 metL CDS
Automated Process Uncurated Go view Salmonella Paratyphi A AKU_12601 BCH-0003982 CDS
Automated Process Uncurated Go view Salmonella Paratyphi A ATCC 9150 ADA-0003941 metL CDS
Automated Process Uncurated Go view Salmonella Paratyphi B SPB7 BCC-0005103 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA23 BBN-0008926 metL CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA29 BBM-0006653 metL CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund CVM19633 BBO-0008382 metL CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund SL480 BBY-0006974 metL CDS
Automated Process Uncurated Go view Salmonella Typhi CT18 ABX-0112960 metL CDS
Automated Process Uncurated Go view Salmonella Typhi Ty2 ABS-0085241 metL CDS
Automated Process Uncurated Go view Salmonella Typhimurium LT2 [T] ABU-0102637 metL CDS
Automated Process Uncurated Go view Salmonella Virchow SL491 BBS-0005053 metL CDS
Automated Process Uncurated Go view Salmonella Weltevreden SL484 BBU-0007790 metL CDS
Automated Process Uncurated Go view Salmonella enterica CVM23701 BBL-0005987 metL CDS
Automated Process Uncurated Go view Shigella boydii 227 ADV-0004316 metL CDS
Automated Process Uncurated Go view Shigella boydii BS512 ADJ-0009842 metL CDS
Automated Process Uncurated Go view Shigella dysenteriae 1012 BAA-0005783 metL CDS
Automated Process Uncurated Go view Shigella dysenteriae 197 ADU-0004267 metL CDS
Automated Process Uncurated Go view Shigella flexneri 2457T ABQ-0074961 metL CDS
Automated Process Uncurated Go view Shigella flexneri 301 ABT-0090234 metL CDS
Automated Process Uncurated Go view Shigella flexneri 8401 BAG-0004263 metL CDS
Automated Process Uncurated Go view Shigella sonnei 046 ADD-0004478 metL CDS
Automated Process Uncurated Go view Yersinia bercovieri ATCC 43970 [T] AEK-0003410 CDS
Automated Process Uncurated Go view Yersinia enterocolitica 8081 BAH-0000356 metL CDS
Automated Process Uncurated Go view Yersinia frederiksenii ATCC 33641 [T] AEI-0003207 metL CDS
Automated Process Uncurated Go view Yersinia intermedia ATCC 29909 [T] AEH-0003913 metL CDS
Automated Process Uncurated Go view Yersinia mollaretii ATCC 43969 [T] AEJ-0003680 CDS
Automated Process Uncurated Go view Yersinia pestis 91001 (biovar Microtus) ACQ-0234494 metL CDS
Automated Process Uncurated Go view Yersinia pestis Angola (biovar Pestoides) ADI-0007929 metL CDS
Automated Process Uncurated Go view Yersinia pestis Antiqua (biovar Antiqua) BAE-0000334 metL CDS
Automated Process Uncurated Go view Yersinia pestis B42003004 (biovar Antiqua) BAL-0007735 metL CDS
Automated Process Uncurated Go view Yersinia pestis CA88-4125 (biovar Orientalis) BAF-0003153 metL CDS
Automated Process Uncurated Go view Yersinia pestis CO92 (biovar Orientalis) ABY-0115691 metL CDS
Automated Process Uncurated Go view Yersinia pestis E1979001 (biovar Antiqua) BAM-0007869 metL CDS
Automated Process Uncurated Go view Yersinia pestis F1991016 (biovar Orientalis) BAQ-0008796 metL CDS
Automated Process Uncurated Go view Yersinia pestis FV-1 (biovar Orientalis) BAK-0001476 CDS
Automated Process Uncurated Go view Yersinia pestis IP275 (biovar Orientalis) BAC-0005429 metL CDS
Automated Process Uncurated Go view Yersinia pestis K1973002 (biovar Mediaevalis) BAO-0007146 metL CDS
Automated Process Uncurated Go view Yersinia pestis KIM (biovar Mediaevalis) ABI-0029896 metL CDS
Automated Process Uncurated Go view Yersinia pestis MG05-1020 (biovar Orientalis) BAP-0005023 metL CDS
Automated Process Uncurated Go view Yersinia pestis Nepal516 (biovar Antiqua) BAD-0004493 metL CDS
Automated Process Uncurated Go view Yersinia pestis Pestoides F (biovar Pestoides) BAI-0004556 CDS
Automated Process Uncurated Go view Yersinia pestis UG05-0454 (biovar Antiqua) BAN-0008824 metL CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP31758 ADS-0004049 metL CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP32953 ACZ-0000113 metL CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis PB1/+ AFV-0000124 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis YPIII AFW-0004861 CDS
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 4222555 to 4234987
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
AEC-0000001sourceforward14686137Contains
AEC-0003645priACDScomplement42223324224530Upstream
AEC-0003646rpmECDSforward42247334224945Upstream
AEC-0003647yiiXCDScomplement42250064225614Upstream
AEC-0003648metJCDScomplement42257984226115Upstream
AEC-0003649metBCDSforward42263924227552Upstream
AEC-0003650metLCDSforward42275554229987Matches
AEC-0003651metFCDSforward42303364231226Downstream
AEC-0003652katGCDSforward42315554233735Downstream
AEC-0003653yijECDSforward42338284234733Downstream
AEC-0003654yijFCDScomplement42347604235377Downstream
Release Notes to toptop
submitted to GenBank; assigned accession number CP000948