Escherichia coli K-12 DH10B
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Working With: Genome: Escherichia coli K-12 DH10B Version: 10

AEC-0003666 (argE) - Escherichia coli K-12 DH10B - Feature Annotation

ASAP ID
AEC-0003666 showshow history
Names
argE ECDH10B_4145
Product
acetylornithine deacetylase
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome complement 4251416 4252567 1152 384
Sequence

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Context

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Pre-Run Search Results
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InterProScan
BLASTP
Protein Families to toptop
Author Approval Family Annotated
Automated Process Approved IPR010169 (IPR010169 Acetylornithine deacetylase ArgE) Jul 2009
Automated Process Approved IPR011650 (IPR011650 Peptidase M20, dimerisation domain) Jul 2009
Automated Process Approved IPR001261 (IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site) Jul 2009
Automated Process Approved IPR002933 (IPR002933 Peptidase M20) Jul 2009
Protein Domains to toptop
Internal error getting result
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Automated Process Approved GO biological process GO:0006508 proteolysis GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001261
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO biological process GO:0006526 arginine biosynthetic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR010169
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO cellular component GO:0005737 cytoplasm GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR010169
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0046983 protein dimerization activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR011650
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0016787 hydrolase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR011650
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0008237 metallopeptidase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001261
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0008777 acetylornithine deacetylase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR010169
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0008270 zinc ion binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR010169
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0050897 cobalt ion binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR010169
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Approved name argE Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0012955
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Person Approved locus tag ECDH10B_4145 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu
Reference: Escherichia coli K-12 DH10B 		Feb 2008
Product
Person Approved product acetylornithine deacetylase Published Annotation - PubMed ID: 16397293
Reference: Escherichia coli K-12 		Mar 2007
Protein Family
Automated Process Approved protein family IPR010169 Acetylornithine deacetylase ArgE Protein Sequence Similarity - InterPro Domain: IPR010169
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR011650 Peptidase M20, dimerisation domain Protein Sequence Similarity - InterPro Domain: IPR011650
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site Protein Sequence Similarity - InterPro Domain: IPR001261
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR002933 Peptidase M20 Protein Sequence Similarity - InterPro Domain: IPR002933
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Other
Person Approved comment 100% identical to E. coli K-12 MG1655 feature ABE-0012955 Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0012955
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Gene Ontology
Automated Process Approved GO biological process GO:0006508 proteolysis GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001261
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO biological process GO:0006526 arginine biosynthetic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR010169
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO cellular component GO:0005737 cytoplasm GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR010169
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0008237 metallopeptidase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001261
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0008270 zinc ion binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR010169
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0008777 acetylornithine deacetylase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR010169
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0050897 cobalt ion binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR010169
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0016787 hydrolase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR011650
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0046983 protein dimerization activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR011650
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0000537 argE CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0000790 argE CDS
Ortholog
Automated Process Uncurated Go view Dickeya dadantii 3937 ABF-0017721 argE CDS
Automated Process Uncurated Go view Erwinia tasmaniensis Et1/99 [T] AFI-0000139 argE CDS
Automated Process Uncurated Go view Escherichia albertii TW07627 AFX-0001896 argE CDS
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0007506 argE CDS
Automated Process Uncurated Go view Escherichia coli 536 (UPEC) AEF-0004215 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0007032 argE CDS
Automated Process Uncurated Go view Escherichia coli APEC O1 (APEC) AEG-0004020 argE CDS
Automated Process Uncurated Go view Escherichia coli ATCC 8739 AEM-0010253 CDS
Automated Process Uncurated Go view Escherichia coli B171 (EPEC) ADN-0009122 argE CDS
Automated Process Uncurated Go view Escherichia coli B7A (ETEC) ADK-0010181 CDS
Automated Process Uncurated Go view Escherichia coli CFT073 (UPEC) ABR-0081114 argE CDS
Automated Process Uncurated Go view Escherichia coli E110019 (EPEC) ADM-0006435 argE CDS
Automated Process Uncurated Go view Escherichia coli E22 (EPEC) ADL-0007592 argE CDS
Automated Process Uncurated Go view Escherichia coli E2348/69 (EPEC) BCI-0004543 argE CDS
Automated Process Uncurated Go view Escherichia coli E24377A (ETEC) ADO-0008930 argE CDS
Automated Process Uncurated Go view Escherichia coli EC4024 (EHEC) BBI-0001203 CDS
Automated Process Uncurated Go view Escherichia coli EC4042 (EHEC) BBA-0008747 argE CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0007260 argE CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0007451 argE CDS
Automated Process Uncurated Go view Escherichia coli EC4113 (EHEC) BAY-0006877 argE CDS
Automated Process Uncurated Go view Escherichia coli EC4115 (EHEC) BAS-0010249 argE CDS
Automated Process Uncurated Go view Escherichia coli EC4196 (EHEC) BAX-0007837 argE CDS
Automated Process Uncurated Go view Escherichia coli EC4206 (EHEC) BAW-0008064 argE CDS
Automated Process Uncurated Go view Escherichia coli EC4401 (EHEC) BAV-0007609 argE CDS
Automated Process Uncurated Go view Escherichia coli EC4486 (EHEC) BAU-0007691 argE CDS
Automated Process Uncurated Go view Escherichia coli EC4501 (EHEC) BAT-0007242 argE CDS
Automated Process Uncurated Go view Escherichia coli EC508 (EHEC) BBJ-0007192 argE CDS
Automated Process Uncurated Go view Escherichia coli EC869 (EHEC) BBC-0007132 argE CDS
Automated Process Uncurated Go view Escherichia coli EDL933 (EHEC) ABH-0029119 argE CDS
Automated Process Uncurated Go view Escherichia coli F11 (UPEC) ADQ-0007827 argE_2 CDS
Automated Process Uncurated Go view Escherichia coli HS ADR-0008876 argE CDS
Person Uncurated Go view Escherichia coli K-12 MG1655 ABE-0012955 argE CDS
Automated Process Uncurated Go view Escherichia coli K-12 W3110 ADY-0003398 argE CDS
Automated Process Uncurated Go view Escherichia coli SE11 AFS-0004337 CDS
Automated Process Uncurated Go view Escherichia coli SMS-3-5 AFT-0004399 argE CDS
Automated Process Uncurated Go view Escherichia coli Sakai (EHEC) ACA-0134985 argE CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0001798 CDS
Automated Process Uncurated Go view Escherichia coli UTI89 (UPEC) AEA-0004557 argE CDS
Automated Process Uncurated Go view Pectobacterium atrosepticum SCRI1043 ABL-0060392 argE CDS
Automated Process Uncurated Go view Pectobacterium brasiliensis 1692 AED-0000104 argE CDS
Automated Process Uncurated Go view Pectobacterium carotovorum WPP14 ADT-0001268 argE CDS
Automated Process Uncurated Go view Pectobacterium parmentieri WPP163 AFJ-0003748 argE CDS
Automated Process Uncurated Go view Salmonella Agona SL483 BBX-0008525 argE CDS
Automated Process Uncurated Go view Salmonella Arizonae CDC 346-86 BCD-0003715 CDS
Automated Process Uncurated Go view Salmonella Choleraesuis SC-B67 ADB-0004707 argE CDS
Automated Process Uncurated Go view Salmonella Dublin CT_02021853 BCB-0008766 argE CDS
Automated Process Uncurated Go view Salmonella Enteritidis P125109 BCF-0012939 argE CDS
Automated Process Uncurated Go view Salmonella Gallinarum 287/91 BCG-0010019 argE CDS
Automated Process Uncurated Go view Salmonella Hadar RI_05P066 BBT-0007425 argE CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL476 BBV-0008804 argE CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL486 BBW-0007768 argE CDS
Automated Process Uncurated Go view Salmonella Javiana GA_MM04042433 BCA-0007721 argE CDS
Automated Process Uncurated Go view Salmonella Kentucky CDC 191 BBZ-0007414 argE CDS
Automated Process Uncurated Go view Salmonella Kentucky CVM29188 BBP-0007916 argE CDS
Automated Process Uncurated Go view Salmonella Newport SL254 BBQ-0008800 argE CDS
Automated Process Uncurated Go view Salmonella Newport SL317 BBR-0008705 argE CDS
Automated Process Uncurated Go view Salmonella Paratyphi A AKU_12601 BCH-0003996 CDS
Automated Process Uncurated Go view Salmonella Paratyphi A ATCC 9150 ADA-0003955 argE CDS
Automated Process Uncurated Go view Salmonella Paratyphi B SPB7 BCC-0005126 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA23 BBN-0008945 argE CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA29 BBM-0006634 argE CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund CVM19633 BBO-0008394 argE CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund SL480 BBY-0006986 argE CDS
Automated Process Uncurated Go view Salmonella Typhi CT18 ABX-0112921 argE CDS
Automated Process Uncurated Go view Salmonella Typhi Ty2 ABS-0085228 argE CDS
Automated Process Uncurated Go view Salmonella Typhimurium LT2 [T] ABU-0102698 argE CDS
Automated Process Uncurated Go view Salmonella Virchow SL491 BBS-0005040 argE CDS
Automated Process Uncurated Go view Salmonella Weltevreden SL484 BBU-0007777 argE CDS
Automated Process Uncurated Go view Salmonella enterica CVM23701 BBL-0006006 argE CDS
Automated Process Uncurated Go view Shigella boydii 227 ADV-0004332 argE CDS
Automated Process Uncurated Go view Shigella boydii BS512 ADJ-0009859 argE CDS
Automated Process Uncurated Go view Shigella dysenteriae 1012 BAA-0005767 argE CDS
Automated Process Uncurated Go view Shigella dysenteriae 197 ADU-0004284 argE CDS
Automated Process Uncurated Go view Shigella flexneri 2457T ABQ-0074939 argE CDS
Automated Process Uncurated Go view Shigella flexneri 301 ABT-0090247 argE CDS
Automated Process Uncurated Go view Shigella flexneri 8401 BAG-0004279 argE CDS
Automated Process Uncurated Go view Shigella sonnei 046 ADD-0004494 argE CDS
Automated Process Uncurated Go view Yersinia bercovieri ATCC 43970 [T] AEK-0002370 CDS
Automated Process Uncurated Go view Yersinia enterocolitica 8081 BAH-0000370 argE CDS
Automated Process Uncurated Go view Yersinia frederiksenii ATCC 33641 [T] AEI-0003210 argE CDS
Automated Process Uncurated Go view Yersinia intermedia ATCC 29909 [T] AEH-0003375 argE CDS
Automated Process Uncurated Go view Yersinia mollaretii ATCC 43969 [T] AEJ-0002677 CDS
Automated Process Uncurated Go view Yersinia pestis 91001 (biovar Microtus) ACQ-0241754 argE CDS
Automated Process Uncurated Go view Yersinia pestis Angola (biovar Pestoides) ADI-0008023 argE CDS
Automated Process Uncurated Go view Yersinia pestis Antiqua (biovar Antiqua) BAE-0000120 argE CDS
Automated Process Uncurated Go view Yersinia pestis B42003004 (biovar Antiqua) BAL-0007730 argE CDS
Automated Process Uncurated Go view Yersinia pestis CA88-4125 (biovar Orientalis) BAF-0003459 argE CDS
Automated Process Uncurated Go view Yersinia pestis CO92 (biovar Orientalis) ABY-0128523 argE CDS
Automated Process Uncurated Go view Yersinia pestis E1979001 (biovar Antiqua) BAM-0005941 argE CDS
Automated Process Uncurated Go view Yersinia pestis F1991016 (biovar Orientalis) BAQ-0008789 argE CDS
Automated Process Uncurated Go view Yersinia pestis FV-1 (biovar Orientalis) BAK-0002072 CDS
Automated Process Uncurated Go view Yersinia pestis IP275 (biovar Orientalis) BAC-0006035 argE CDS
Automated Process Uncurated Go view Yersinia pestis K1973002 (biovar Mediaevalis) BAO-0007151 argE CDS
Automated Process Uncurated Go view Yersinia pestis KIM (biovar Mediaevalis) ABI-0029903 argE CDS
Automated Process Uncurated Go view Yersinia pestis MG05-1020 (biovar Orientalis) BAP-0006836 argE CDS
Automated Process Uncurated Go view Yersinia pestis Nepal516 (biovar Antiqua) BAD-0000052 argE CDS
Automated Process Uncurated Go view Yersinia pestis Pestoides F (biovar Pestoides) BAI-0004251 CDS
Automated Process Uncurated Go view Yersinia pestis UG05-0454 (biovar Antiqua) BAN-0007434 argE CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP31758 ADS-0004053 argE CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP32953 ACZ-0000116 argE CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis PB1/+ AFV-0000129 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis YPIII AFW-0004857 CDS
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 4246416 to 4257567
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
AEC-0000001sourceforward14686137Contains
AEC-0003664yijPCDScomplement42462524247985Downstream
AEC-0003665ppcCDScomplement42481674250818Downstream
AEC-0003666argECDScomplement42514164252567Matches
AEC-0003667argCCDSforward42527214253725Upstream
AEC-0003668argBCDSforward42537364254509Upstream
AEC-0003669argHCDSforward42545704255943Upstream
AEC-0004287oxySncRNAcomplement42560054256114Upstream
AEC-0003670oxyRCDSforward42562104257127Upstream
AEC-0003671sthACDScomplement42571104258510Upstream
Release Notes to toptop
submitted to GenBank; assigned accession number CP000948