Escherichia coli K-12 DH10B
About ASAP Data Release Policy University of Wisconsin—Madison
Home    Overview    Annotations    BLAST    Downloads    Comparative Genomics    Experiments    Strains    Help (this script)    User: guest  / Log On   
Working With: Genome: Escherichia coli K-12 DH10B Version: 10

AEC-0003668 (argB) - Escherichia coli K-12 DH10B - Feature Annotation

ASAP ID
AEC-0003668 showshow history
Names
argB ECDH10B_4147
Product
acetylglutamate kinase
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome forward 4253736 4254509 774 258
Sequence

Get full DNA or protein sequence

View sequence with flanking regions: bases upstream and bases downstream

Context

Browse sequence in GaPP

You last hovered over feature (none)
Pre-Run Search Results
Search Database View Results
InterProScan
BLASTP
Protein Families to toptop
Author Approval Family Annotated
Automated Process Approved IPR004662 (IPR004662 Acetylglutamate kinase family) Jul 2009
Automated Process Approved IPR001048 (IPR001048 Aspartate/glutamate/uridylate kinase) Jul 2009
Automated Process Approved IPR011148 (IPR011148 (DEPRECATED) N-acetylglutamate kinase) Jul 2009
Protein Domains to toptop
Internal error getting result
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Automated Process Approved GO biological process GO:0006526 arginine biosynthetic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR004662
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO biological process GO:0008652 cellular amino acid biosynthetic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001048
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO cellular component GO:0005737 cytoplasm GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR004662
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0003991 acetylglutamate kinase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR004662
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Approved name argB Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0012967
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Person Approved locus tag ECDH10B_4147 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu
Reference: Escherichia coli K-12 DH10B 		Feb 2008
Product
Person Approved product acetylglutamate kinase Published Annotation - PubMed ID: 16397293
Reference: Escherichia coli K-12 		Mar 2007
Protein Family
Automated Process Approved protein family IPR004662 Acetylglutamate kinase family Protein Sequence Similarity - InterPro Domain: IPR004662
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR011148 (DEPRECATED) N-acetylglutamate kinase Protein Sequence Similarity - InterPro Domain: IPR011148
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR001048 Aspartate/glutamate/uridylate kinase Protein Sequence Similarity - InterPro Domain: IPR001048
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Other
Person Approved comment 100% identical to E. coli K-12 MG1655 feature ABE-0012967 Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0012967
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Gene Ontology
Automated Process Approved GO biological process GO:0008652 cellular amino acid biosynthetic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001048
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO biological process GO:0006526 arginine biosynthetic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR004662
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO cellular component GO:0005737 cytoplasm GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR004662
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0003991 acetylglutamate kinase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR004662
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0000403 argB CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0000718 argB CDS
Ortholog
Automated Process Uncurated Go view Dickeya dadantii 3937 ABF-0017724 argB CDS
Automated Process Uncurated Go view Erwinia tasmaniensis Et1/99 [T] AFI-0000140 argB CDS
Automated Process Uncurated Go view Escherichia albertii TW07627 AFX-0001898 argB CDS
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0007504 argB CDS
Automated Process Uncurated Go view Escherichia coli 536 (UPEC) AEF-0004217 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0007030 argB CDS
Automated Process Uncurated Go view Escherichia coli APEC O1 (APEC) AEG-0004022 argB CDS
Automated Process Uncurated Go view Escherichia coli ATCC 8739 AEM-0010251 CDS
Automated Process Uncurated Go view Escherichia coli B171 (EPEC) ADN-0009120 argB CDS
Automated Process Uncurated Go view Escherichia coli B7A (ETEC) ADK-0010529 CDS
Automated Process Uncurated Go view Escherichia coli CFT073 (UPEC) ABR-0081116 argB CDS
Automated Process Uncurated Go view Escherichia coli E110019 (EPEC) ADM-0006437 argB CDS
Automated Process Uncurated Go view Escherichia coli E22 (EPEC) ADL-0007590 argB CDS
Automated Process Uncurated Go view Escherichia coli E2348/69 (EPEC) BCI-0004545 argB CDS
Automated Process Uncurated Go view Escherichia coli E24377A (ETEC) ADO-0008932 argB CDS
Automated Process Uncurated Go view Escherichia coli EC4024 (EHEC) BBI-0001205 CDS
Automated Process Uncurated Go view Escherichia coli EC4042 (EHEC) BBA-0008749 argB CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0007262 argB CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0007453 argB CDS
Automated Process Uncurated Go view Escherichia coli EC4113 (EHEC) BAY-0006875 argB CDS
Automated Process Uncurated Go view Escherichia coli EC4115 (EHEC) BAS-0010251 argB CDS
Automated Process Uncurated Go view Escherichia coli EC4196 (EHEC) BAX-0007835 argB CDS
Automated Process Uncurated Go view Escherichia coli EC4206 (EHEC) BAW-0008066 argB CDS
Automated Process Uncurated Go view Escherichia coli EC4401 (EHEC) BAV-0007611 argB CDS
Automated Process Uncurated Go view Escherichia coli EC4486 (EHEC) BAU-0007693 argB CDS
Automated Process Uncurated Go view Escherichia coli EC4501 (EHEC) BAT-0007240 argB CDS
Automated Process Uncurated Go view Escherichia coli EC508 (EHEC) BBJ-0007190 argB CDS
Automated Process Uncurated Go view Escherichia coli EC869 (EHEC) BBC-0007134 argB CDS
Automated Process Uncurated Go view Escherichia coli EDL933 (EHEC) ABH-0029121 argB CDS
Automated Process Uncurated Go view Escherichia coli F11 (UPEC) ADQ-0007829 argB CDS
Automated Process Uncurated Go view Escherichia coli HS ADR-0008878 argB CDS
Person Uncurated Go view Escherichia coli K-12 MG1655 ABE-0012967 argB CDS
Automated Process Uncurated Go view Escherichia coli K-12 W3110 ADY-0003396 argB CDS
Automated Process Uncurated Go view Escherichia coli SE11 AFS-0004339 CDS
Automated Process Uncurated Go view Escherichia coli SMS-3-5 AFT-0004401 argB CDS
Automated Process Uncurated Go view Escherichia coli Sakai (EHEC) ACA-0134987 argB CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0001800 CDS
Automated Process Uncurated Go view Escherichia coli UTI89 (UPEC) AEA-0004559 argB CDS
Automated Process Uncurated Go view Pectobacterium atrosepticum SCRI1043 ABL-0060394 argB CDS
Automated Process Uncurated Go view Pectobacterium brasiliensis 1692 AED-0000125 argB CDS
Automated Process Uncurated Go view Pectobacterium carotovorum WPP14 ADT-0000053 argB CDS
Automated Process Uncurated Go view Pectobacterium parmentieri WPP163 AFJ-0003750 argB CDS
Automated Process Uncurated Go view Salmonella Agona SL483 BBX-0008527 argB CDS
Automated Process Uncurated Go view Salmonella Arizonae CDC 346-86 BCD-0003712 CDS
Automated Process Uncurated Go view Salmonella Choleraesuis SC-B67 ADB-0004709 argB CDS
Automated Process Uncurated Go view Salmonella Dublin CT_02021853 BCB-0008768 argB CDS
Automated Process Uncurated Go view Salmonella Enteritidis P125109 BCF-0012948 argB CDS
Automated Process Uncurated Go view Salmonella Gallinarum 287/91 BCG-0010013 argB CDS
Automated Process Uncurated Go view Salmonella Hadar RI_05P066 BBT-0007423 argB CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL476 BBV-0008806 argB CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL486 BBW-0007766 argB CDS
Automated Process Uncurated Go view Salmonella Javiana GA_MM04042433 BCA-0007723 argB CDS
Automated Process Uncurated Go view Salmonella Kentucky CDC 191 BBZ-0007416 argB CDS
Automated Process Uncurated Go view Salmonella Kentucky CVM29188 BBP-0007918 argB CDS
Automated Process Uncurated Go view Salmonella Newport SL254 BBQ-0008802 argB CDS
Automated Process Uncurated Go view Salmonella Newport SL317 BBR-0008707 argB CDS
Automated Process Uncurated Go view Salmonella Paratyphi A AKU_12601 BCH-0003998 CDS
Automated Process Uncurated Go view Salmonella Paratyphi A ATCC 9150 ADA-0003957 argB CDS
Automated Process Uncurated Go view Salmonella Paratyphi B SPB7 BCC-0005128 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA23 BBN-0008947 argB CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA29 BBM-0006632 argB CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund CVM19633 BBO-0008396 argB CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund SL480 BBY-0006988 argB CDS
Automated Process Uncurated Go view Salmonella Typhi CT18 ABX-0112917 argB CDS
Automated Process Uncurated Go view Salmonella Typhi Ty2 ABS-0085226 argB CDS
Automated Process Uncurated Go view Salmonella Typhimurium LT2 [T] ABU-0102713 argB CDS
Automated Process Uncurated Go view Salmonella Virchow SL491 BBS-0005038 argB CDS
Automated Process Uncurated Go view Salmonella Weltevreden SL484 BBU-0007775 argB CDS
Automated Process Uncurated Go view Salmonella enterica CVM23701 BBL-0006008 argB CDS
Automated Process Uncurated Go view Shigella boydii 227 ADV-0004334 argB CDS
Automated Process Uncurated Go view Shigella boydii BS512 ADJ-0009861 argB CDS
Automated Process Uncurated Go view Shigella dysenteriae 1012 BAA-0005765 argB CDS
Automated Process Uncurated Go view Shigella dysenteriae 197 ADU-0004286 argB CDS
Automated Process Uncurated Go view Shigella flexneri 2457T ABQ-0074937 argB CDS
Automated Process Uncurated Go view Shigella flexneri 301 ABT-0090249 argB CDS
Automated Process Uncurated Go view Shigella flexneri 8401 BAG-0004281 argB CDS
Automated Process Uncurated Go view Shigella sonnei 046 ADD-0004496 argB CDS
Automated Process Uncurated Go view Yersinia bercovieri ATCC 43970 [T] AEK-0002372 CDS
Automated Process Uncurated Go view Yersinia enterocolitica 8081 BAH-0000379 argB CDS
Automated Process Uncurated Go view Yersinia frederiksenii ATCC 33641 [T] AEI-0003212 argB CDS
Automated Process Uncurated Go view Yersinia intermedia ATCC 29909 [T] AEH-0003373 argB CDS
Automated Process Uncurated Go view Yersinia mollaretii ATCC 43969 [T] AEJ-0002679 CDS
Automated Process Uncurated Go view Yersinia pestis 91001 (biovar Microtus) ACQ-0241757 argB CDS
Automated Process Uncurated Go view Yersinia pestis Angola (biovar Pestoides) ADI-0008021 argB CDS
Automated Process Uncurated Go view Yersinia pestis Antiqua (biovar Antiqua) BAE-0000122 argB CDS
Automated Process Uncurated Go view Yersinia pestis B42003004 (biovar Antiqua) BAL-0007728 argB CDS
Automated Process Uncurated Go view Yersinia pestis CA88-4125 (biovar Orientalis) BAF-0003461 argB CDS
Automated Process Uncurated Go view Yersinia pestis CO92 (biovar Orientalis) ABY-0128517 argB CDS
Automated Process Uncurated Go view Yersinia pestis E1979001 (biovar Antiqua) BAM-0005943 argB CDS
Automated Process Uncurated Go view Yersinia pestis F1991016 (biovar Orientalis) BAQ-0008787 argB CDS
Automated Process Uncurated Go view Yersinia pestis FV-1 (biovar Orientalis) BAK-0002632 CDS
Automated Process Uncurated Go view Yersinia pestis IP275 (biovar Orientalis) BAC-0006033 argB CDS
Automated Process Uncurated Go view Yersinia pestis K1973002 (biovar Mediaevalis) BAO-0007153 argB CDS
Automated Process Uncurated Go view Yersinia pestis KIM (biovar Mediaevalis) ABI-0029905 argB CDS
Automated Process Uncurated Go view Yersinia pestis MG05-1020 (biovar Orientalis) BAP-0006838 argB CDS
Automated Process Uncurated Go view Yersinia pestis Nepal516 (biovar Antiqua) BAD-0000054 argB CDS
Automated Process Uncurated Go view Yersinia pestis Pestoides F (biovar Pestoides) BAI-0004249 CDS
Automated Process Uncurated Go view Yersinia pestis UG05-0454 (biovar Antiqua) BAN-0007432 argB CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP31758 ADS-0004055 argB CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP32953 ACZ-0000118 argB CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis PB1/+ AFV-0000132 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis YPIII AFW-0004855 CDS
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 4248736 to 4259509
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
AEC-0000001sourceforward14686137Contains
AEC-0003665ppcCDScomplement42481674250818Upstream
AEC-0003666argECDScomplement42514164252567Upstream
AEC-0003667argCCDSforward42527214253725Upstream
AEC-0003668argBCDSforward42537364254509Matches
AEC-0003669argHCDSforward42545704255943Downstream
AEC-0004287oxySncRNAcomplement42560054256114Downstream
AEC-0003670oxyRCDSforward42562104257127Downstream
AEC-0003671sthACDScomplement42571104258510Downstream
AEC-0003672fabRCDSforward42588444259491Downstream
AEC-0003673yijDCDSforward42594914259850Downstream
Release Notes to toptop
submitted to GenBank; assigned accession number CP000948