Escherichia coli K-12 DH10B
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Working With: Genome: Escherichia coli K-12 DH10B Version: 10

AEC-0003706 (purH) - Escherichia coli K-12 DH10B - Feature Annotation

ASAP ID
AEC-0003706 showshow history
Names
purH ECDH10B_4195
Product
fused IMP cyclohydrolase; phosphoribosylaminoimidazolecarboxamide formyltransferase
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome complement 4303662 4305251 1590 530
Sequence

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Context

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Pre-Run Search Results
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InterProScan
BLASTP
Protein Families to toptop
Author Approval Family Annotated
Automated Process Approved IPR002695 (IPR002695 Bifunctional purine biosynthesis protein PurH-like) Jul 2009
Automated Process Approved IPR013982 (IPR013982 (DEPRECATED) AICARFT/IMPCHase bienzyme, transformylase domain) Jul 2009
Automated Process Approved IPR011607 (IPR011607 Methylglyoxal synthase-like domain) Jul 2009
Protein Domains to toptop
Internal error getting result
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Automated Process Approved GO biological process GO:0006164 purine nucleotide biosynthetic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR002695
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO biological process GO:0006188 IMP biosynthetic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR013982
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0003824 catalytic activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR013982
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0003937 IMP cyclohydrolase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR002695
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0004643 phosphoribosylaminoimidazolecarboxamide formyltransferase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR002695
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Approved name purH Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0013097
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Person Approved locus tag ECDH10B_4195 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu
Reference: Escherichia coli K-12 DH10B 		Feb 2008
Product
Person Approved product fused IMP cyclohydrolase; phosphoribosylaminoimidazolecarboxamide formyltransferase Published Annotation - PubMed ID: 16397293
Reference: Escherichia coli K-12 		Mar 2007
Protein Family
Automated Process Approved protein family IPR002695 Bifunctional purine biosynthesis protein PurH-like Protein Sequence Similarity - InterPro Domain: IPR002695
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR013982 (DEPRECATED) AICARFT/IMPCHase bienzyme, transformylase domain Protein Sequence Similarity - InterPro Domain: IPR013982
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR011607 Methylglyoxal synthase-like domain Protein Sequence Similarity - InterPro Domain: IPR011607
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Other
Person Approved comment 100% identical to E. coli K-12 MG1655 feature ABE-0013097 Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0013097
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Gene Ontology
Automated Process Approved GO biological process GO:0006188 IMP biosynthetic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR013982
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO biological process GO:0006164 purine nucleotide biosynthetic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR002695
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0004643 phosphoribosylaminoimidazolecarboxamide formyltransferase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR002695
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0003824 catalytic activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR013982
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0003937 IMP cyclohydrolase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR002695
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0000505 purH CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0000608 purH CDS
Ortholog
Automated Process Uncurated Go view Dickeya dadantii 3937 ABF-0014933 purH CDS
Automated Process Uncurated Go view Erwinia tasmaniensis Et1/99 [T] AFI-0000194 purH CDS
Automated Process Uncurated Go view Escherichia albertii TW07627 AFX-0001758 purH CDS
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0009157 purH CDS
Automated Process Uncurated Go view Escherichia coli 536 (UPEC) AEF-0004267 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0006976 purH CDS
Automated Process Uncurated Go view Escherichia coli APEC O1 (APEC) AEG-0004063 purH CDS
Automated Process Uncurated Go view Escherichia coli ATCC 8739 AEM-0010199 CDS
Automated Process Uncurated Go view Escherichia coli B171 (EPEC) ADN-0009804 purH CDS
Automated Process Uncurated Go view Escherichia coli B7A (ETEC) ADK-0009076 CDS
Automated Process Uncurated Go view Escherichia coli CFT073 (UPEC) ABR-0081170 purH CDS
Automated Process Uncurated Go view Escherichia coli E110019 (EPEC) ADM-0006083 purH CDS
Automated Process Uncurated Go view Escherichia coli E22 (EPEC) ADL-0010423 purH CDS
Automated Process Uncurated Go view Escherichia coli E2348/69 (EPEC) BCI-0004599 purH CDS
Automated Process Uncurated Go view Escherichia coli E24377A (ETEC) ADO-0008986 purH CDS
Automated Process Uncurated Go view Escherichia coli EC4024 (EHEC) BBI-0006547 CDS
Automated Process Uncurated Go view Escherichia coli EC4042 (EHEC) BBA-0008805 purH CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0007318 purH CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0006965 purH CDS
Automated Process Uncurated Go view Escherichia coli EC4113 (EHEC) BAY-0010140 purH CDS
Automated Process Uncurated Go view Escherichia coli EC4115 (EHEC) BAS-0010307 purH CDS
Automated Process Uncurated Go view Escherichia coli EC4196 (EHEC) BAX-0009935 purH CDS
Automated Process Uncurated Go view Escherichia coli EC4206 (EHEC) BAW-0008123 purH CDS
Automated Process Uncurated Go view Escherichia coli EC4486 (EHEC) BAU-0010882 purH CDS
Automated Process Uncurated Go view Escherichia coli EC508 (EHEC) BBJ-0006111 purH CDS
Automated Process Uncurated Go view Escherichia coli EC869 (EHEC) BBC-0010628 purH CDS
Automated Process Uncurated Go view Escherichia coli EDL933 (EHEC) ABH-0029173 purH CDS
Automated Process Uncurated Go view Escherichia coli F11 (UPEC) ADQ-0009598 purH CDS
Automated Process Uncurated Go view Escherichia coli HS ADR-0008929 purH CDS
Person Uncurated Go view Escherichia coli K-12 MG1655 ABE-0013097 purH CDS
Automated Process Uncurated Go view Escherichia coli K-12 W3110 ADY-0003348 purH CDS
Automated Process Uncurated Go view Escherichia coli SE11 AFS-0004391 CDS
Automated Process Uncurated Go view Escherichia coli SMS-3-5 AFT-0004449 purH CDS
Automated Process Uncurated Go view Escherichia coli Sakai (EHEC) ACA-0135037 purH CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0001843 CDS
Automated Process Uncurated Go view Escherichia coli UTI89 (UPEC) AEA-0003823 purH CDS
Automated Process Uncurated Go view Pectobacterium atrosepticum SCRI1043 ABL-0060454 purH CDS
Automated Process Uncurated Go view Pectobacterium brasiliensis 1692 AED-0000150 purH CDS
Automated Process Uncurated Go view Pectobacterium carotovorum WPP14 ADT-0001278 purH CDS
Automated Process Uncurated Go view Pectobacterium parmentieri WPP163 AFJ-0001380 purH CDS
Automated Process Uncurated Go view Salmonella Agona SL483 BBX-0008583 purH CDS
Automated Process Uncurated Go view Salmonella Arizonae CDC 346-86 BCD-0003641 CDS
Automated Process Uncurated Go view Salmonella Dublin CT_02021853 BCB-0008823 purH CDS
Automated Process Uncurated Go view Salmonella Enteritidis P125109 BCF-0013105 purH CDS
Automated Process Uncurated Go view Salmonella Gallinarum 287/91 BCG-0010428 purH CDS
Automated Process Uncurated Go view Salmonella Hadar RI_05P066 BBT-0008878 purH CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL476 BBV-0008862 purH CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL486 BBW-0008700 purH CDS
Automated Process Uncurated Go view Salmonella Javiana GA_MM04042433 BCA-0008473 purH CDS
Automated Process Uncurated Go view Salmonella Kentucky CDC 191 BBZ-0008638 purH CDS
Automated Process Uncurated Go view Salmonella Kentucky CVM29188 BBP-0007974 purH CDS
Automated Process Uncurated Go view Salmonella Newport SL254 BBQ-0008856 purH CDS
Automated Process Uncurated Go view Salmonella Newport SL317 BBR-0009093 purH CDS
Automated Process Uncurated Go view Salmonella Paratyphi A AKU_12601 BCH-0004050 CDS
Automated Process Uncurated Go view Salmonella Paratyphi A ATCC 9150 ADA-0004009 purH CDS
Automated Process Uncurated Go view Salmonella Paratyphi B SPB7 BCC-0005190 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA23 BBN-0004207 purH CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund CVM19633 BBO-0008451 purH CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund SL480 BBY-0008741 purH CDS
Automated Process Uncurated Go view Salmonella Typhi CT18 ABX-0112814 purH CDS
Automated Process Uncurated Go view Salmonella Typhi Ty2 ABS-0085177 purH CDS
Automated Process Uncurated Go view Salmonella Typhimurium LT2 [T] ABU-0102844 purH CDS
Automated Process Uncurated Go view Salmonella Virchow SL491 BBS-0004982 purH CDS
Automated Process Uncurated Go view Salmonella Weltevreden SL484 BBU-0009235 purH CDS
Automated Process Uncurated Go view Salmonella enterica CVM23701 BBL-0009019 purH CDS
Automated Process Uncurated Go view Shigella boydii 227 ADV-0004383 purH CDS
Automated Process Uncurated Go view Shigella boydii BS512 ADJ-0009917 purH CDS
Automated Process Uncurated Go view Shigella dysenteriae 1012 BAA-0004548 purH CDS
Automated Process Uncurated Go view Shigella dysenteriae 197 ADU-0004209 purH CDS
Automated Process Uncurated Go view Shigella flexneri 2457T ABQ-0074881 purH CDS
Automated Process Uncurated Go view Shigella flexneri 301 ABT-0090296 purH CDS
Automated Process Uncurated Go view Shigella flexneri 8401 BAG-0004333 purH CDS
Automated Process Uncurated Go view Shigella sonnei 046 ADD-0004543 purH CDS
Automated Process Uncurated Go view Yersinia bercovieri ATCC 43970 [T] AEK-0002755 CDS
Automated Process Uncurated Go view Yersinia enterocolitica 8081 BAH-0000956 purH CDS
Automated Process Uncurated Go view Yersinia frederiksenii ATCC 33641 [T] AEI-0003919 purH CDS
Automated Process Uncurated Go view Yersinia intermedia ATCC 29909 [T] AEH-0003927 purH CDS
Automated Process Uncurated Go view Yersinia mollaretii ATCC 43969 [T] AEJ-0003073 CDS
Automated Process Uncurated Go view Yersinia pestis 91001 (biovar Microtus) ACQ-0241705 purH CDS
Automated Process Uncurated Go view Yersinia pestis Angola (biovar Pestoides) ADI-0004571 purH CDS
Automated Process Uncurated Go view Yersinia pestis Antiqua (biovar Antiqua) BAE-0004299 purH CDS
Automated Process Uncurated Go view Yersinia pestis B42003004 (biovar Antiqua) BAL-0008523 purH CDS
Automated Process Uncurated Go view Yersinia pestis CA88-4125 (biovar Orientalis) BAF-0003646 purH CDS
Automated Process Uncurated Go view Yersinia pestis CO92 (biovar Orientalis) ABY-0127814 purH CDS
Automated Process Uncurated Go view Yersinia pestis E1979001 (biovar Antiqua) BAM-0008577 purH CDS
Automated Process Uncurated Go view Yersinia pestis F1991016 (biovar Orientalis) BAQ-0008732 purH CDS
Automated Process Uncurated Go view Yersinia pestis IP275 (biovar Orientalis) BAC-0007576 purH CDS
Automated Process Uncurated Go view Yersinia pestis K1973002 (biovar Mediaevalis) BAO-0008153 purH CDS
Automated Process Uncurated Go view Yersinia pestis KIM (biovar Mediaevalis) ABI-0030122 purH CDS
Automated Process Uncurated Go view Yersinia pestis MG05-1020 (biovar Orientalis) BAP-0009034 purH CDS
Automated Process Uncurated Go view Yersinia pestis Nepal516 (biovar Antiqua) BAD-0000303 purH CDS
Automated Process Uncurated Go view Yersinia pestis Pestoides F (biovar Pestoides) BAI-0004476 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP31758 ADS-0007871 purH CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP32953 ACZ-0000327 purH CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis PB1/+ AFV-0000380 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis YPIII AFW-0000417 CDS
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 4298662 to 4310251
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
AEC-0000001sourceforward14686137Contains
AEC-0003701yjaHCDSforward42982854298980Downstream
AEC-0003702zraPCDScomplement42989824299407Downstream
AEC-0003703zraSCDSforward42996454301042Downstream
AEC-0003704zraRCDSforward43010394302364Downstream
AEC-0003705purDCDScomplement43023614303650Downstream
AEC-0003706purHCDScomplement43036624305251Matches
AEC-0004237rrsErRNAforward43058664307407Upstream
AEC-0004187gltVtRNAforward43074934307568Upstream
AEC-0004238rrlErRNAforward43077624310665Upstream
Release Notes to toptop
submitted to GenBank; assigned accession number CP000948