Escherichia coli K-12 DH10B
Working With: Genome: Escherichia coli K-12 DH10B Version: 10

AEC-0003737 (plsB) - Escherichia coli K-12 DH10B - Feature Annotation

ASAP ID
AEC-0003737 showshow history
Names
plsB ECDH10B_4230
Product
glycerol-3-phosphate O-acyltransferase
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome complement 4351762 4354185 2424 808
Sequence

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Context

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InterProScan
BLASTP
Protein Families to toptop
Author Approval Family Annotated
Automated Process Approved IPR002123 (IPR002123 Phospholipid/glycerol acyltransferase) Jul 2009
Protein Domains to toptop
Internal error getting result
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Automated Process Approved GO biological process GO:0008152 metabolic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR002123
Reference: Escherichia coli K-12 DH10B
Jul 2009
Automated Process Approved GO molecular function GO:0008415 (DEPRECATED) acyltransferase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR002123
Reference: Escherichia coli K-12 DH10B
Jul 2009
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Approved name plsB Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0013232
Reference: Escherichia coli K-12 MG1655
Mar 2007
Person Approved locus tag ECDH10B_4230 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu
Reference: Escherichia coli K-12 DH10B
Feb 2008
Product
Person Approved product glycerol-3-phosphate O-acyltransferase Published Annotation - PubMed ID: 16397293
Reference: Escherichia coli K-12
Mar 2007
Protein Family
Automated Process Approved protein family IPR002123 Phospholipid/glycerol acyltransferase Protein Sequence Similarity - InterPro Domain: IPR002123
Reference: Escherichia coli K-12 DH10B
Jul 2009
Other
Person Approved comment 100% identical to E. coli K-12 MG1655 feature ABE-0013232 Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0013232
Reference: Escherichia coli K-12 MG1655
Mar 2007
Gene Ontology
Automated Process Approved GO biological process GO:0008152 metabolic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR002123
Reference: Escherichia coli K-12 DH10B
Jul 2009
Automated Process Approved GO molecular function GO:0008415 (DEPRECATED) acyltransferase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR002123
Reference: Escherichia coli K-12 DH10B
Jul 2009
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0001500 plsB CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0001109 plsB CDS
Ortholog
Automated Process Uncurated Go view Dickeya dadantii 3937 ABF-0018673 plsB CDS
Automated Process Uncurated Go view Erwinia tasmaniensis Et1/99 [T] AFI-0003208 plsB CDS
Automated Process Uncurated Go view Escherichia albertii TW07627 AFX-0002001 plsB CDS
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0006278 plsB CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0006934 plsB CDS
Automated Process Uncurated Go view Escherichia coli APEC O1 (APEC) AEG-0004104 plsB CDS
Automated Process Uncurated Go view Escherichia coli ATCC 8739 AEM-0010155 CDS
Automated Process Uncurated Go view Escherichia coli B171 (EPEC) ADN-0006183 plsB CDS
Automated Process Uncurated Go view Escherichia coli B7A (ETEC) ADK-0007711 CDS
Automated Process Uncurated Go view Escherichia coli CFT073 (UPEC) ABR-0081219 plsB CDS
Automated Process Uncurated Go view Escherichia coli E110019 (EPEC) ADM-0006126 plsB CDS
Automated Process Uncurated Go view Escherichia coli E22 (EPEC) ADL-0006581 plsB CDS
Automated Process Uncurated Go view Escherichia coli E2348/69 (EPEC) BCI-0004652 plsB CDS
Automated Process Uncurated Go view Escherichia coli E24377A (ETEC) ADO-0009031 plsB CDS
Automated Process Uncurated Go view Escherichia coli EC4024 (EHEC) BBI-0003077 CDS
Automated Process Uncurated Go view Escherichia coli EC4042 (EHEC) BBA-0008850 plsB CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0007363 plsB CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0007010 plsB CDS
Automated Process Uncurated Go view Escherichia coli EC4113 (EHEC) BAY-0008928 plsB CDS
Automated Process Uncurated Go view Escherichia coli EC4115 (EHEC) BAS-0010352 plsB CDS
Automated Process Uncurated Go view Escherichia coli EC4196 (EHEC) BAX-0007025 plsB CDS
Automated Process Uncurated Go view Escherichia coli EC4206 (EHEC) BAW-0008168 plsB CDS
Automated Process Uncurated Go view Escherichia coli EC4401 (EHEC) BAV-0007139 plsB CDS
Automated Process Uncurated Go view Escherichia coli EC4486 (EHEC) BAU-0005719 plsB CDS
Automated Process Uncurated Go view Escherichia coli EC4501 (EHEC) BAT-0006489 plsB CDS
Automated Process Uncurated Go view Escherichia coli EC508 (EHEC) BBJ-0006066 plsB CDS
Automated Process Uncurated Go view Escherichia coli EC869 (EHEC) BBC-0004989 plsB CDS
Automated Process Uncurated Go view Escherichia coli EDL933 (EHEC) ABH-0029216 plsB CDS
Automated Process Uncurated Go view Escherichia coli F11 (UPEC) ADQ-0006992 plsB CDS
Automated Process Uncurated Go view Escherichia coli HS ADR-0008970 plsB CDS
Person Uncurated Go view Escherichia coli K-12 MG1655 ABE-0013232 plsB CDS
Automated Process Uncurated Go view Escherichia coli K-12 W3110 ADY-0004127 plsB CDS
Automated Process Uncurated Go view Escherichia coli SE11 AFS-0004433 CDS
Automated Process Uncurated Go view Escherichia coli SMS-3-5 AFT-0004495 plsB CDS
Automated Process Uncurated Go view Escherichia coli Sakai (EHEC) ACA-0135136 plsB CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0003286 CDS
Automated Process Uncurated Go view Escherichia coli UTI89 (UPEC) AEA-0004620 plsB CDS
Automated Process Uncurated Go view Pectobacterium atrosepticum SCRI1043 ABL-0060852 plsB CDS
Automated Process Uncurated Go view Pectobacterium brasiliensis 1692 AED-0004257 plsB CDS
Automated Process Uncurated Go view Pectobacterium carotovorum WPP14 ADT-0003347 plsB CDS
Automated Process Uncurated Go view Pectobacterium parmentieri WPP163 AFJ-0000946 plsB CDS
Automated Process Uncurated Go view Salmonella Agona SL483 BBX-0008654 CDS
Automated Process Uncurated Go view Salmonella Arizonae CDC 346-86 BCD-0003603 CDS
Automated Process Uncurated Go view Salmonella Choleraesuis SC-B67 ADB-0004845 plsB CDS
Automated Process Uncurated Go view Salmonella Dublin CT_02021853 BCB-0008868 CDS
Automated Process Uncurated Go view Salmonella Enteritidis P125109 BCF-0013230 plsB CDS
Automated Process Uncurated Go view Salmonella Gallinarum 287/91 BCG-0012500 plsB CDS
Automated Process Uncurated Go view Salmonella Hadar RI_05P066 BBT-0007865 CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL476 BBV-0008932 CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL486 BBW-0007336 CDS
Automated Process Uncurated Go view Salmonella Javiana GA_MM04042433 BCA-0003972 CDS
Automated Process Uncurated Go view Salmonella Kentucky CDC 191 BBZ-0005713 CDS
Automated Process Uncurated Go view Salmonella Kentucky CVM29188 BBP-0008040 CDS
Automated Process Uncurated Go view Salmonella Newport SL254 BBQ-0008923 CDS
Automated Process Uncurated Go view Salmonella Newport SL317 BBR-0008229 CDS
Automated Process Uncurated Go view Salmonella Paratyphi A AKU_12601 BCH-0004088 CDS
Automated Process Uncurated Go view Salmonella Paratyphi A ATCC 9150 ADA-0004047 plsB CDS
Automated Process Uncurated Go view Salmonella Paratyphi B SPB7 BCC-0005243 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA23 BBN-0004273 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA29 BBM-0007698 CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund CVM19633 BBO-0008491 CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund SL480 BBY-0008505 CDS
Automated Process Uncurated Go view Salmonella Typhi CT18 ABX-0114381 plsB CDS
Automated Process Uncurated Go view Salmonella Typhi Ty2 ABS-0085868 plsB CDS
Automated Process Uncurated Go view Salmonella Typhimurium LT2 [T] ABU-0103030 plsB CDS
Automated Process Uncurated Go view Salmonella Virchow SL491 BBS-0004914 CDS
Automated Process Uncurated Go view Salmonella Weltevreden SL484 BBU-0007583 CDS
Automated Process Uncurated Go view Salmonella enterica CVM23701 BBL-0005752 CDS
Automated Process Uncurated Go view Shigella boydii 227 ADV-0004434 plsB CDS
Automated Process Uncurated Go view Shigella boydii BS512 ADJ-0009975 plsB CDS
Automated Process Uncurated Go view Shigella dysenteriae 1012 BAA-0004597 plsB CDS
Automated Process Uncurated Go view Shigella dysenteriae 197 ADU-0005138 plsB CDS
Automated Process Uncurated Go view Shigella flexneri 2457T ABQ-0074775 plsB CDS
Automated Process Uncurated Go view Shigella flexneri 301 ABT-0090376 plsB CDS
Automated Process Uncurated Go view Shigella flexneri 8401 BAG-0004431 plsB CDS
Automated Process Uncurated Go view Shigella sonnei 046 ADD-0004586 plsB CDS
Automated Process Uncurated Go view Yersinia bercovieri ATCC 43970 [T] AEK-0002261 CDS
Automated Process Uncurated Go view Yersinia enterocolitica 8081 BAH-0011090 b4041 CDS
Automated Process Uncurated Go view Yersinia frederiksenii ATCC 33641 [T] AEI-0003360 pslB CDS
Automated Process Uncurated Go view Yersinia intermedia ATCC 29909 [T] AEH-0003050 plsB CDS
Automated Process Uncurated Go view Yersinia mollaretii ATCC 43969 [T] AEJ-0002660 CDS
Automated Process Uncurated Go view Yersinia pestis 91001 (biovar Microtus) ACQ-0235302 plsB CDS
Automated Process Uncurated Go view Yersinia pestis Antiqua (biovar Antiqua) BAE-0004738 plsB CDS
Automated Process Uncurated Go view Yersinia pestis CA88-4125 (biovar Orientalis) BAF-0002995 plsB CDS
Automated Process Uncurated Go view Yersinia pestis CO92 (biovar Orientalis) ABY-0116373 plsB CDS
Automated Process Uncurated Go view Yersinia pestis FV-1 (biovar Orientalis) BAK-0001185 CDS
Automated Process Uncurated Go view Yersinia pestis KIM (biovar Mediaevalis) ABI-0030195 plsB CDS
Automated Process Uncurated Go view Yersinia pestis Nepal516 (biovar Antiqua) BAD-0004036 plsB CDS
Automated Process Uncurated Go view Yersinia pestis Pestoides F (biovar Pestoides) BAI-0004396 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP31758 ADS-0007799 plsB CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP32953 ACZ-0000399 plsB CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis PB1/+ AFV-0000462 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis YPIII AFW-0004580 CDS
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 4346762 to 4359185
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
AEC-0000001sourceforward14686137Contains
AEC-0003732lamBCDSforward43456904347030Downstream
AEC-0003733malMCDSforward43472734348193Downstream
AEC-0003734yjbICDSforward43486744350002Downstream
AEC-0003735ubiCCDSforward43502254350722Downstream
AEC-0003736ubiACDSforward43507354351607Downstream
AEC-0003737plsBCDScomplement43517624354185Matches
AEC-0003738dgkACDSforward43543564354724Upstream
AEC-0003739lexACDSforward43548344355442Upstream
AEC-0003740dinFCDSforward43554614356840Upstream
AEC-0003741yjbJCDSforward43569564357165Upstream
AEC-0003742zurCDScomplement43572074357722Upstream
AEC-0003743yjbLCDSpforward43580404358294Upstream
AEC-0004530pseudogeneforward43580404359025Upstream
AEC-0003744yjbMCDSpforward43583184359025Upstream
Release Notes to toptop
submitted to GenBank; assigned accession number CP000948