Escherichia coli K-12 DH10B
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Working With: Genome: Escherichia coli K-12 DH10B Version: 10

AEC-0003738 (dgkA) - Escherichia coli K-12 DH10B - Feature Annotation

ASAP ID
AEC-0003738 showshow history
Names
dgkA ECDH10B_4231
Product
diacylglycerol kinase
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome forward 4354356 4354724 369 123
Sequence

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Context

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InterProScan
BLASTP
Protein Families to toptop
Author Approval Family Annotated
Automated Process Approved IPR000829 (IPR000829 DAGK family) Jul 2009
Protein Domains to toptop
Internal error getting result
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Automated Process Approved GO biological process GO:0008654 phospholipid biosynthetic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR000829
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO cellular component GO:0016020 membrane GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR000829
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0004143 diacylglycerol kinase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR000829
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Approved name dgkA Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0013235
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Person Approved locus tag ECDH10B_4231 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu
Reference: Escherichia coli K-12 DH10B 		Feb 2008
Product
Person Approved product diacylglycerol kinase Published Annotation - PubMed ID: 16397293
Reference: Escherichia coli K-12 		Mar 2007
Protein Family
Automated Process Approved protein family IPR000829 DAGK family Protein Sequence Similarity - InterPro Domain: IPR000829
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Other
Person Approved comment 100% identical to E. coli K-12 MG1655 feature ABE-0013235 Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0013235
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Gene Ontology
Automated Process Approved GO biological process GO:0008654 phospholipid biosynthetic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR000829
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO cellular component GO:0016020 membrane GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR000829
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0004143 diacylglycerol kinase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR000829
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0001137 dgkA CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0000741 dgkA CDS
Ortholog
Automated Process Uncurated Go view Dickeya dadantii 3937 ABF-0018675 dgkA CDS
Automated Process Uncurated Go view Erwinia tasmaniensis Et1/99 [T] AFI-0003207 dgkA CDS
Automated Process Uncurated Go view Escherichia albertii TW07627 AFX-0002000 dgkA CDS
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0006279 dgkA CDS
Automated Process Uncurated Go view Escherichia coli 536 (UPEC) AEF-0004311 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0006933 dgkA CDS
Automated Process Uncurated Go view Escherichia coli APEC O1 (APEC) AEG-0004105 dgkA CDS
Automated Process Uncurated Go view Escherichia coli ATCC 8739 AEM-0010154 CDS
Automated Process Uncurated Go view Escherichia coli B171 (EPEC) ADN-0006184 dgkA CDS
Automated Process Uncurated Go view Escherichia coli B7A (ETEC) ADK-0007710 CDS
Automated Process Uncurated Go view Escherichia coli CFT073 (UPEC) ABR-0081221 dgkA CDS
Automated Process Uncurated Go view Escherichia coli E110019 (EPEC) ADM-0006127 dgkA CDS
Automated Process Uncurated Go view Escherichia coli E22 (EPEC) ADL-0006582 dgkA CDS
Automated Process Uncurated Go view Escherichia coli E2348/69 (EPEC) BCI-0004653 dgkA CDS
Automated Process Uncurated Go view Escherichia coli E24377A (ETEC) ADO-0009032 dgkA CDS
Automated Process Uncurated Go view Escherichia coli EC4024 (EHEC) BBI-0003078 CDS
Automated Process Uncurated Go view Escherichia coli EC4042 (EHEC) BBA-0008851 dgkA CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0007364 dgkA CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0007011 dgkA CDS
Automated Process Uncurated Go view Escherichia coli EC4113 (EHEC) BAY-0008927 dgkA CDS
Automated Process Uncurated Go view Escherichia coli EC4115 (EHEC) BAS-0010353 dgkA CDS
Automated Process Uncurated Go view Escherichia coli EC4196 (EHEC) BAX-0007026 dgkA CDS
Automated Process Uncurated Go view Escherichia coli EC4206 (EHEC) BAW-0008169 dgkA CDS
Automated Process Uncurated Go view Escherichia coli EC4401 (EHEC) BAV-0007140 dgkA CDS
Automated Process Uncurated Go view Escherichia coli EC4486 (EHEC) BAU-0005720 dgkA CDS
Automated Process Uncurated Go view Escherichia coli EC4501 (EHEC) BAT-0006490 dgkA CDS
Automated Process Uncurated Go view Escherichia coli EC508 (EHEC) BBJ-0006065 dgkA CDS
Automated Process Uncurated Go view Escherichia coli EC869 (EHEC) BBC-0004990 dgkA CDS
Automated Process Uncurated Go view Escherichia coli EDL933 (EHEC) ABH-0029217 dgkA CDS
Automated Process Uncurated Go view Escherichia coli F11 (UPEC) ADQ-0006993 dgkA CDS
Automated Process Uncurated Go view Escherichia coli HS ADR-0008971 dgkA CDS
Person Uncurated Go view Escherichia coli K-12 MG1655 ABE-0013235 dgkA CDS
Automated Process Uncurated Go view Escherichia coli K-12 W3110 ADY-0004128 dgkA CDS
Automated Process Uncurated Go view Escherichia coli SE11 AFS-0004434 CDS
Automated Process Uncurated Go view Escherichia coli SMS-3-5 AFT-0004496 dgkA CDS
Automated Process Uncurated Go view Escherichia coli Sakai (EHEC) ACA-0135137 dgkA CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0003287 CDS
Automated Process Uncurated Go view Escherichia coli UTI89 (UPEC) AEA-0004621 dgkA CDS
Automated Process Uncurated Go view Pectobacterium atrosepticum SCRI1043 ABL-0060853 dgkA CDS
Automated Process Uncurated Go view Pectobacterium brasiliensis 1692 AED-0000334 dgkA CDS
Automated Process Uncurated Go view Pectobacterium carotovorum WPP14 ADT-0001344 dgkA CDS
Automated Process Uncurated Go view Pectobacterium parmentieri WPP163 AFJ-0000947 dgkA CDS
Automated Process Uncurated Go view Salmonella Agona SL483 BBX-0008655 dgkA CDS
Automated Process Uncurated Go view Salmonella Arizonae CDC 346-86 BCD-0003602 CDS
Automated Process Uncurated Go view Salmonella Choleraesuis SC-B67 ADB-0004846 dgkA CDS
Automated Process Uncurated Go view Salmonella Dublin CT_02021853 BCB-0008869 dgkA CDS
Automated Process Uncurated Go view Salmonella Enteritidis P125109 BCF-0013232 dgkA CDS
Automated Process Uncurated Go view Salmonella Gallinarum 287/91 BCG-0012502 dgkA CDS
Automated Process Uncurated Go view Salmonella Hadar RI_05P066 BBT-0007864 dgkA CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL476 BBV-0008933 dgkA CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL486 BBW-0007337 dgkA CDS
Automated Process Uncurated Go view Salmonella Javiana GA_MM04042433 BCA-0003973 dgkA CDS
Automated Process Uncurated Go view Salmonella Kentucky CDC 191 BBZ-0005714 dgkA CDS
Automated Process Uncurated Go view Salmonella Kentucky CVM29188 BBP-0008041 dgkA CDS
Automated Process Uncurated Go view Salmonella Newport SL254 BBQ-0008924 dgkA CDS
Automated Process Uncurated Go view Salmonella Newport SL317 BBR-0008230 dgkA CDS
Automated Process Uncurated Go view Salmonella Paratyphi A AKU_12601 BCH-0004089 CDS
Automated Process Uncurated Go view Salmonella Paratyphi A ATCC 9150 ADA-0004048 dgkA CDS
Automated Process Uncurated Go view Salmonella Paratyphi B SPB7 BCC-0005244 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA23 BBN-0004274 dgkA CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA29 BBM-0007697 dgkA CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund CVM19633 BBO-0008492 dgkA CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund SL480 BBY-0008506 dgkA CDS
Automated Process Uncurated Go view Salmonella Typhi CT18 ABX-0114383 dgkA CDS
Automated Process Uncurated Go view Salmonella Typhi Ty2 ABS-0085869 dgkA CDS
Automated Process Uncurated Go view Salmonella Typhimurium LT2 [T] ABU-0103034 dgkA CDS
Automated Process Uncurated Go view Salmonella Virchow SL491 BBS-0004913 dgkA CDS
Automated Process Uncurated Go view Salmonella Weltevreden SL484 BBU-0007582 dgkA CDS
Automated Process Uncurated Go view Salmonella enterica CVM23701 BBL-0005753 dgkA CDS
Automated Process Uncurated Go view Shigella boydii 227 ADV-0004433 dgkA CDS
Automated Process Uncurated Go view Shigella boydii BS512 ADJ-0009974 dgkA CDS
Automated Process Uncurated Go view Shigella dysenteriae 1012 BAA-0004598 dgkA CDS
Automated Process Uncurated Go view Shigella dysenteriae 197 ADU-0005137 dgkA CDS
Automated Process Uncurated Go view Shigella flexneri 2457T ABQ-0074776 dgkA CDS
Automated Process Uncurated Go view Shigella flexneri 301 ABT-0090375 dgkA CDS
Automated Process Uncurated Go view Shigella flexneri 8401 BAG-0004430 dgkA CDS
Automated Process Uncurated Go view Shigella sonnei 046 ADD-0004587 dgkA CDS
Automated Process Uncurated Go view Yersinia bercovieri ATCC 43970 [T] AEK-0002260 CDS
Automated Process Uncurated Go view Yersinia enterocolitica 8081 BAH-0011086 b4042 CDS
Automated Process Uncurated Go view Yersinia frederiksenii ATCC 33641 [T] AEI-0003359 b4042 CDS
Automated Process Uncurated Go view Yersinia intermedia ATCC 29909 [T] AEH-0003049 dgkA CDS
Automated Process Uncurated Go view Yersinia mollaretii ATCC 43969 [T] AEJ-0002659 CDS
Automated Process Uncurated Go view Yersinia pestis 91001 (biovar Microtus) ACQ-0235303 dgkA CDS
Automated Process Uncurated Go view Yersinia pestis Angola (biovar Pestoides) ADI-0005408 dgkA CDS
Automated Process Uncurated Go view Yersinia pestis Antiqua (biovar Antiqua) BAE-0004737 dgkA CDS
Automated Process Uncurated Go view Yersinia pestis B42003004 (biovar Antiqua) BAL-0007975 dgkA CDS
Automated Process Uncurated Go view Yersinia pestis CA88-4125 (biovar Orientalis) BAF-0002994 dgkA CDS
Automated Process Uncurated Go view Yersinia pestis CO92 (biovar Orientalis) ABY-0116375 dgkA CDS
Automated Process Uncurated Go view Yersinia pestis E1979001 (biovar Antiqua) BAM-0006773 dgkA CDS
Automated Process Uncurated Go view Yersinia pestis F1991016 (biovar Orientalis) BAQ-0006973 dgkA CDS
Automated Process Uncurated Go view Yersinia pestis FV-1 (biovar Orientalis) BAK-0001186 CDS
Automated Process Uncurated Go view Yersinia pestis IP275 (biovar Orientalis) BAC-0005605 dgkA CDS
Automated Process Uncurated Go view Yersinia pestis K1973002 (biovar Mediaevalis) BAO-0007433 dgkA CDS
Automated Process Uncurated Go view Yersinia pestis KIM (biovar Mediaevalis) ABI-0030196 dgkA CDS
Automated Process Uncurated Go view Yersinia pestis MG05-1020 (biovar Orientalis) BAP-0004820 dgkA CDS
Automated Process Uncurated Go view Yersinia pestis Nepal516 (biovar Antiqua) BAD-0004035 dgkA CDS
Automated Process Uncurated Go view Yersinia pestis Pestoides F (biovar Pestoides) BAI-0004395 CDS
Automated Process Uncurated Go view Yersinia pestis UG05-0454 (biovar Antiqua) BAN-0008781 dgkA CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP31758 ADS-0007798 dgkA CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP32953 ACZ-0000400 dgkA CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis PB1/+ AFV-0000463 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis YPIII AFW-0004579 CDS
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 4349356 to 4359724
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
AEC-0000001sourceforward14686137Contains
AEC-0003734yjbICDSforward43486744350002Upstream
AEC-0003735ubiCCDSforward43502254350722Upstream
AEC-0003736ubiACDSforward43507354351607Upstream
AEC-0003737plsBCDScomplement43517624354185Upstream
AEC-0003738dgkACDSforward43543564354724Matches
AEC-0003739lexACDSforward43548344355442Downstream
AEC-0003740dinFCDSforward43554614356840Downstream
AEC-0003741yjbJCDSforward43569564357165Downstream
AEC-0003742zurCDScomplement43572074357722Downstream
AEC-0003743yjbLCDSpforward43580404358294Downstream
AEC-0004530pseudogeneforward43580404359025Downstream
AEC-0003744yjbMCDSpforward43583184359025Downstream
AEC-0003745dusACDSforward43593884360425Downstream
Release Notes to toptop
submitted to GenBank; assigned accession number CP000948