Escherichia coli K-12 DH10B
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Working With: Genome: Escherichia coli K-12 DH10B Version: 10

AEC-0003751 (aphA) - Escherichia coli K-12 DH10B - Feature Annotation

ASAP ID
AEC-0003751 showshow history
Names
aphA ECDH10B_4244
Product
acid phosphatase/phosphotransferase, class B, non-specific
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome forward 4367133 4367846 714 238
Sequence

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Context

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InterProScan
BLASTP
Protein Families to toptop
Author Approval Family Annotated
Automated Process Approved IPR005519 (IPR005519 Acid phosphatase, class B-like) Jul 2009
Automated Process Approved IPR010025 (IPR010025 HAD-superfamily phosphatase, subfamily IIIB, AphA) Jul 2009
Protein Domains to toptop
Internal error getting result
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Automated Process Approved GO cellular component GO:0030288 outer membrane-bounded periplasmic space GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR010025
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0003993 acid phosphatase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR005519
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Approved name aphA Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0013283
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Person Approved locus tag ECDH10B_4244 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu
Reference: Escherichia coli K-12 DH10B 		Feb 2008
Product
Person Approved product acid phosphatase/phosphotransferase, class B, non-specific Published Annotation - PubMed ID: 16397293
Reference: Escherichia coli K-12 		Mar 2007
Protein Family
Automated Process Approved protein family IPR005519 Acid phosphatase, class B-like Protein Sequence Similarity - InterPro Domain: IPR005519
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR010025 HAD-superfamily phosphatase, subfamily IIIB, AphA Protein Sequence Similarity - InterPro Domain: IPR010025
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Other
Person Approved comment 100% identical to E. coli K-12 MG1655 feature ABE-0013283 Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0013283
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Gene Ontology
Automated Process Approved GO cellular component GO:0030288 outer membrane-bounded periplasmic space GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR010025
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0003993 acid phosphatase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR005519
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0002769 aphA CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0002794 aphA CDS
Ortholog
Automated Process Uncurated Go view Escherichia albertii TW07627 AFX-0001978 aphA CDS
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0006332 aphA CDS
Automated Process Uncurated Go view Escherichia coli 536 (UPEC) AEF-0004334 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0006917 CDS
Automated Process Uncurated Go view Escherichia coli APEC O1 (APEC) AEG-0004131 aphA CDS
Automated Process Uncurated Go view Escherichia coli ATCC 8739 AEM-0010138 CDS
Automated Process Uncurated Go view Escherichia coli B171 (EPEC) ADN-0006262 aphA CDS
Automated Process Uncurated Go view Escherichia coli B7A (ETEC) ADK-0009244 pseudogene
Automated Process Uncurated Go view Escherichia coli CFT073 (UPEC) ABR-0081253 aphA CDS
Automated Process Uncurated Go view Escherichia coli E110019 (EPEC) ADM-0006143 aphA CDS
Automated Process Uncurated Go view Escherichia coli E2348/69 (EPEC) BCI-0004675 aphA CDS
Automated Process Uncurated Go view Escherichia coli E24377A (ETEC) ADO-0009044 aphA CDS
Automated Process Uncurated Go view Escherichia coli EC4024 (EHEC) BBI-0003110 CDS
Automated Process Uncurated Go view Escherichia coli EC4042 (EHEC) BBA-0008886 CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0007399 CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0007044 aphA CDS
Automated Process Uncurated Go view Escherichia coli EC4113 (EHEC) BAY-0006279 aphA CDS
Automated Process Uncurated Go view Escherichia coli EC4115 (EHEC) BAS-0010388 CDS
Automated Process Uncurated Go view Escherichia coli EC4196 (EHEC) BAX-0007060 aphA CDS
Automated Process Uncurated Go view Escherichia coli EC4206 (EHEC) BAW-0008204 CDS
Automated Process Uncurated Go view Escherichia coli EC4401 (EHEC) BAV-0007174 aphA CDS
Automated Process Uncurated Go view Escherichia coli EC4486 (EHEC) BAU-0005756 aphA CDS
Automated Process Uncurated Go view Escherichia coli EC4501 (EHEC) BAT-0006503 aphA CDS
Automated Process Uncurated Go view Escherichia coli EC508 (EHEC) BBJ-0006030 aphA CDS
Automated Process Uncurated Go view Escherichia coli EC869 (EHEC) BBC-0005025 aphA CDS
Automated Process Uncurated Go view Escherichia coli EDL933 (EHEC) ABH-0029229 aphA CDS
Automated Process Uncurated Go view Escherichia coli F11 (UPEC) ADQ-0007017 aphA CDS
Person Uncurated Go view Escherichia coli K-12 MG1655 ABE-0013283 aphA CDS
Automated Process Uncurated Go view Escherichia coli K-12 W3110 ADY-0004141 aphA CDS
Automated Process Uncurated Go view Escherichia coli SE11 AFS-0004449 CDS
Automated Process Uncurated Go view Escherichia coli SMS-3-5 AFT-0004509 aphA CDS
Automated Process Uncurated Go view Escherichia coli Sakai (EHEC) ACA-0135149 aphA CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0003300 CDS
Automated Process Uncurated Go view Escherichia coli UTI89 (UPEC) AEA-0004650 aphA CDS
Automated Process Uncurated Go view Salmonella Agona SL483 BBX-0008668 aphA CDS
Automated Process Uncurated Go view Salmonella Arizonae CDC 346-86 BCD-0003589 CDS
Automated Process Uncurated Go view Salmonella Choleraesuis SC-B67 ADB-0004861 aphA CDS
Automated Process Uncurated Go view Salmonella Dublin CT_02021853 BCB-0008883 aphA CDS
Automated Process Uncurated Go view Salmonella Enteritidis P125109 BCF-0013273 aphA CDS
Automated Process Uncurated Go view Salmonella Gallinarum 287/91 BCG-0012541 aphA CDS
Automated Process Uncurated Go view Salmonella Hadar RI_05P066 BBT-0007850 aphA CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL476 BBV-0008947 aphA CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL486 BBW-0007351 aphA CDS
Automated Process Uncurated Go view Salmonella Javiana GA_MM04042433 BCA-0003986 aphA CDS
Automated Process Uncurated Go view Salmonella Kentucky CDC 191 BBZ-0005727 aphA CDS
Automated Process Uncurated Go view Salmonella Kentucky CVM29188 BBP-0008054 aphA CDS
Automated Process Uncurated Go view Salmonella Newport SL254 BBQ-0008938 aphA CDS
Automated Process Uncurated Go view Salmonella Newport SL317 BBR-0008244 aphA CDS
Automated Process Uncurated Go view Salmonella Paratyphi A AKU_12601 BCH-0004102 CDS
Automated Process Uncurated Go view Salmonella Paratyphi A ATCC 9150 ADA-0004061 aphA CDS
Automated Process Uncurated Go view Salmonella Paratyphi B SPB7 BCC-0005259 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA23 BBN-0004288 aphA CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA29 BBM-0007683 aphA CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund CVM19633 BBO-0008561 aphA CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund SL480 BBY-0006252 aphA CDS
Automated Process Uncurated Go view Salmonella Typhi CT18 ABX-0114412 aphA CDS
Automated Process Uncurated Go view Salmonella Typhi Ty2 ABS-0085882 aphA CDS
Automated Process Uncurated Go view Salmonella Typhimurium LT2 [T] ABU-0103077 aphA CDS
Automated Process Uncurated Go view Salmonella Virchow SL491 BBS-0004899 aphA CDS
Automated Process Uncurated Go view Salmonella Weltevreden SL484 BBU-0007568 aphA CDS
Automated Process Uncurated Go view Salmonella enterica CVM23701 BBL-0005767 aphA CDS
Automated Process Uncurated Go view Shigella boydii 227 ADV-0004443 aphA CDS
Automated Process Uncurated Go view Shigella boydii BS512 ADJ-0009988 aphA CDS
Automated Process Uncurated Go view Shigella dysenteriae 1012 BAA-0004615 aphA CDS
Automated Process Uncurated Go view Shigella flexneri 2457T ABQ-0074789 aphA CDS
Automated Process Uncurated Go view Shigella flexneri 301 ABT-0090361 aphA CDS
Automated Process Uncurated Go view Shigella flexneri 8401 BAG-0004417 aphA CDS
Automated Process Uncurated Go view Shigella sonnei 046 ADD-0004600 aphA CDS
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 4362133 to 4372846
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
AEC-0000001sourceforward14686137Contains
AEC-0003748dnaBCDSforward43620334363448Upstream
AEC-0003749alrCDSforward43635014364580Upstream
AEC-0003750tyrBCDSforward43648334366026Upstream
AEC-0004547yjbSpseudogenecomplement43662484366731Upstream
AEC-0003751aphACDSforward43671334367846Matches
AEC-0003752yjbQCDSforward43679574368373Downstream
AEC-0003753yjbRCDSforward43683774368733Downstream
AEC-0003754ssbCDSforward43718444372380Downstream
AEC-0003755yjcBCDScomplement43724794372760Downstream
Release Notes to toptop
submitted to GenBank; assigned accession number CP000948