Escherichia coli K-12 DH10B
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Working With: Genome: Escherichia coli K-12 DH10B Version: 10

AEC-0003860 (purA) - Escherichia coli K-12 DH10B - Feature Annotation

ASAP ID
AEC-0003860 showshow history
Names
purA ECDH10B_4372
Product
adenylosuccinate synthetase
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome forward 4503072 4504370 1299 433
Sequence

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Context

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InterProScan
BLASTP
Protein Families to toptop
Author Approval Family Annotated
Automated Process Approved IPR001114 (IPR001114 Adenylosuccinate synthetase) Jul 2009
Protein Domains to toptop
Internal error getting result
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Automated Process Approved GO biological process GO:0006164 purine nucleotide biosynthetic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001114
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0005525 GTP binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001114
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0004019 adenylosuccinate synthase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001114
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Approved name purA Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0013672
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Person Approved locus tag ECDH10B_4372 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu
Reference: Escherichia coli K-12 DH10B 		Feb 2008
Product
Person Approved product adenylosuccinate synthetase Published Annotation - PubMed ID: 16397293
Reference: Escherichia coli K-12 		Mar 2007
Protein Family
Automated Process Approved protein family IPR001114 Adenylosuccinate synthetase Protein Sequence Similarity - InterPro Domain: IPR001114
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Other
Person Approved comment 100% identical to E. coli K-12 MG1655 feature ABE-0013672 Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0013672
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Gene Ontology
Automated Process Approved GO biological process GO:0006164 purine nucleotide biosynthetic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001114
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0004019 adenylosuccinate synthase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001114
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0005525 GTP binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001114
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0000431 purA CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0000310 purA CDS
Ortholog
Automated Process Uncurated Go view Dickeya dadantii 3937 ABF-0015203 purA CDS
Automated Process Uncurated Go view Erwinia tasmaniensis Et1/99 [T] AFI-0003063 purA CDS
Automated Process Uncurated Go view Escherichia albertii TW07627 AFX-0001084 purA CDS
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0008872 purA CDS
Automated Process Uncurated Go view Escherichia coli 536 (UPEC) AEF-0004474 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0006781 purA CDS
Automated Process Uncurated Go view Escherichia coli APEC O1 (APEC) AEG-0004319 purA CDS
Automated Process Uncurated Go view Escherichia coli ATCC 8739 AEM-0009965 CDS
Automated Process Uncurated Go view Escherichia coli B171 (EPEC) ADN-0006132 purA CDS
Automated Process Uncurated Go view Escherichia coli B7A (ETEC) ADK-0005682 CDS
Automated Process Uncurated Go view Escherichia coli CFT073 (UPEC) ABR-0081475 purA CDS
Automated Process Uncurated Go view Escherichia coli E110019 (EPEC) ADM-0009546 purA CDS
Automated Process Uncurated Go view Escherichia coli E22 (EPEC) ADL-0009957 purA CDS
Automated Process Uncurated Go view Escherichia coli E2348/69 (EPEC) BCI-0004801 purA CDS
Automated Process Uncurated Go view Escherichia coli E24377A (ETEC) ADO-0009173 purA CDS
Automated Process Uncurated Go view Escherichia coli EC4024 (EHEC) BBI-0003242 CDS
Automated Process Uncurated Go view Escherichia coli EC4042 (EHEC) BBA-0009018 purA CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0007532 purA CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0007177 purA CDS
Automated Process Uncurated Go view Escherichia coli EC4113 (EHEC) BAY-0009581 purA CDS
Automated Process Uncurated Go view Escherichia coli EC4115 (EHEC) BAS-0010523 purA CDS
Automated Process Uncurated Go view Escherichia coli EC4196 (EHEC) BAX-0006749 purA CDS
Automated Process Uncurated Go view Escherichia coli EC4206 (EHEC) BAW-0008336 purA CDS
Automated Process Uncurated Go view Escherichia coli EC4401 (EHEC) BAV-0006694 purA CDS
Automated Process Uncurated Go view Escherichia coli EC4486 (EHEC) BAU-0005888 purA CDS
Automated Process Uncurated Go view Escherichia coli EC4501 (EHEC) BAT-0006030 purA CDS
Automated Process Uncurated Go view Escherichia coli EC508 (EHEC) BBJ-0009542 purA CDS
Automated Process Uncurated Go view Escherichia coli EC869 (EHEC) BBC-0005158 purA CDS
Automated Process Uncurated Go view Escherichia coli EDL933 (EHEC) ABH-0029355 purA CDS
Automated Process Uncurated Go view Escherichia coli HS ADR-0009108 purA CDS
Person Uncurated Go view Escherichia coli K-12 MG1655 ABE-0013672 purA CDS
Automated Process Uncurated Go view Escherichia coli K-12 W3110 ADY-0004269 purA CDS
Automated Process Uncurated Go view Escherichia coli SE11 AFS-0004578 CDS
Automated Process Uncurated Go view Escherichia coli SMS-3-5 AFT-0004640 purA CDS
Automated Process Uncurated Go view Escherichia coli Sakai (EHEC) ACA-0135269 purA CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0001191 CDS
Automated Process Uncurated Go view Escherichia coli UTI89 (UPEC) AEA-0004786 purA CDS
Automated Process Uncurated Go view Pectobacterium atrosepticum SCRI1043 ABL-0064245 purA CDS
Automated Process Uncurated Go view Pectobacterium brasiliensis 1692 AED-0002308 purA CDS
Automated Process Uncurated Go view Pectobacterium carotovorum WPP14 ADT-0001016 purA CDS
Automated Process Uncurated Go view Pectobacterium parmentieri WPP163 AFJ-0003824 purA CDS
Automated Process Uncurated Go view Salmonella Agona SL483 BBX-0008804 purA CDS
Automated Process Uncurated Go view Salmonella Arizonae CDC 346-86 BCD-0003420 CDS
Automated Process Uncurated Go view Salmonella Choleraesuis SC-B67 ADB-0005008 purA CDS
Automated Process Uncurated Go view Salmonella Dublin CT_02021853 BCB-0009002 purA CDS
Automated Process Uncurated Go view Salmonella Enteritidis P125109 BCF-0013690 purA CDS
Automated Process Uncurated Go view Salmonella Gallinarum 287/91 BCG-0012945 purA CDS
Automated Process Uncurated Go view Salmonella Hadar RI_05P066 BBT-0007727 purA CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL476 BBV-0009138 purA CDS
Automated Process Uncurated Go view Salmonella Javiana GA_MM04042433 BCA-0004110 purA CDS
Automated Process Uncurated Go view Salmonella Kentucky CVM29188 BBP-0008190 purA CDS
Automated Process Uncurated Go view Salmonella Newport SL254 BBQ-0009072 purA CDS
Automated Process Uncurated Go view Salmonella Newport SL317 BBR-0006308 purA CDS
Automated Process Uncurated Go view Salmonella Paratyphi A AKU_12601 BCH-0004216 CDS
Automated Process Uncurated Go view Salmonella Paratyphi A ATCC 9150 ADA-0004178 purA CDS
Automated Process Uncurated Go view Salmonella Paratyphi B SPB7 BCC-0005524 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA23 BBN-0004424 purA CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund CVM19633 BBO-0008696 purA CDS
Automated Process Uncurated Go view Salmonella Typhi CT18 ABX-0114885 purA CDS
Automated Process Uncurated Go view Salmonella Typhi Ty2 ABS-0086143 purA CDS
Automated Process Uncurated Go view Salmonella Typhimurium LT2 [T] ABU-0103436 purA CDS
Automated Process Uncurated Go view Salmonella Virchow SL491 BBS-0004772 purA CDS
Automated Process Uncurated Go view Shigella boydii 227 ADV-0004661 purA CDS
Automated Process Uncurated Go view Shigella boydii BS512 ADJ-0010127 purA CDS
Automated Process Uncurated Go view Shigella dysenteriae 1012 BAA-0007418 purA CDS
Automated Process Uncurated Go view Shigella dysenteriae 197 ADU-0004987 purA CDS
Automated Process Uncurated Go view Shigella flexneri 2457T ABQ-0075940 purA CDS
Automated Process Uncurated Go view Shigella flexneri 301 ABT-0090545 purA CDS
Automated Process Uncurated Go view Shigella flexneri 8401 BAG-0004607 purA CDS
Automated Process Uncurated Go view Shigella sonnei 046 ADD-0004737 purA CDS
Automated Process Uncurated Go view Yersinia bercovieri ATCC 43970 [T] AEK-0003581 CDS
Automated Process Uncurated Go view Yersinia enterocolitica 8081 BAH-0001198 adeK CDS
Automated Process Uncurated Go view Yersinia frederiksenii ATCC 33641 [T] AEI-0002086 purA CDS
Automated Process Uncurated Go view Yersinia intermedia ATCC 29909 [T] AEH-0003700 purA CDS
Automated Process Uncurated Go view Yersinia mollaretii ATCC 43969 [T] AEJ-0002438 CDS
Automated Process Uncurated Go view Yersinia pestis 91001 (biovar Microtus) ACQ-0235447 purA CDS
Automated Process Uncurated Go view Yersinia pestis Angola (biovar Pestoides) ADI-0004799 purA CDS
Automated Process Uncurated Go view Yersinia pestis Antiqua (biovar Antiqua) BAE-0004661 purA CDS
Automated Process Uncurated Go view Yersinia pestis B42003004 (biovar Antiqua) BAL-0008108 purA CDS
Automated Process Uncurated Go view Yersinia pestis CA88-4125 (biovar Orientalis) BAF-0002933 purA CDS
Automated Process Uncurated Go view Yersinia pestis CO92 (biovar Orientalis) ABY-0116597 purA CDS
Automated Process Uncurated Go view Yersinia pestis E1979001 (biovar Antiqua) BAM-0008340 purA CDS
Automated Process Uncurated Go view Yersinia pestis F1991016 (biovar Orientalis) BAQ-0006904 purA CDS
Automated Process Uncurated Go view Yersinia pestis FV-1 (biovar Orientalis) BAK-0001839 CDS
Automated Process Uncurated Go view Yersinia pestis IP275 (biovar Orientalis) BAC-0005672 purA CDS
Automated Process Uncurated Go view Yersinia pestis K1973002 (biovar Mediaevalis) BAO-0004065 purA CDS
Automated Process Uncurated Go view Yersinia pestis KIM (biovar Mediaevalis) ABI-0030263 purA CDS
Automated Process Uncurated Go view Yersinia pestis MG05-1020 (biovar Orientalis) BAP-0004749 purA CDS
Automated Process Uncurated Go view Yersinia pestis Nepal516 (biovar Antiqua) BAD-0003961 purA CDS
Automated Process Uncurated Go view Yersinia pestis Pestoides F (biovar Pestoides) BAI-0004323 CDS
Automated Process Uncurated Go view Yersinia pestis UG05-0454 (biovar Antiqua) BAN-0006874 purA CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP31758 ADS-0007671 purA CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP32953 ACZ-0000465 purA CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis PB1/+ AFV-0000539 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis YPIII AFW-0004501 CDS
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 4498072 to 4509370
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
AEC-0000001sourceforward14686137Contains
AEC-0003854miaACDSforward44976374498587Upstream
AEC-0003855hfqCDSforward44986734498981Upstream
AEC-0003856hflXCDSforward44990574500337Upstream
AEC-0003857hflKCDSforward45004234501682Upstream
AEC-0003858hflCCDSforward45016854502689Upstream
AEC-0003859yjeTCDSforward45027714502968Upstream
AEC-0003860purACDSforward45030724504370Matches
AEC-0003861nsrRCDSforward45045754505000Downstream
AEC-0003862rnrCDSforward45050394507480Downstream
AEC-0003863rlmBCDSforward45076604508391Downstream
AEC-0003864yjfICDSforward45085184508919Downstream
AEC-0003865yjfJCDSforward45089384509636Downstream
Release Notes to toptop
submitted to GenBank; assigned accession number CP000948