Escherichia coli K-12 DH10B
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Working With: Genome: Escherichia coli K-12 DH10B Version: 10

AEC-0003920 (mgtA) - Escherichia coli K-12 DH10B - Feature Annotation

ASAP ID
AEC-0003920 showshow history
Names
mgtA ECDH10B_4437
Product
magnesium transporter
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome forward 4567456 4570152 2697 899
Sequence

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View sequence with flanking regions: bases upstream and bases downstream

Context

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Pre-Run Search Results
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InterProScan
BLASTP
Protein Families to toptop
Author Approval Family Annotated
Automated Process Approved IPR006415 (IPR006415 P-type ATPase, subfamily IIIB) Jul 2009
Automated Process Approved IPR001757 (IPR001757 P-type ATPase) Jul 2009
Automated Process Approved IPR000695 (IPR000695 (DEPRECATED) ATPase, P-type, H+ transporting proton pump) Jul 2009
Automated Process Approved IPR004014 (IPR004014 Cation-transporting P-type ATPase, N-terminal) Jul 2009
Automated Process Approved IPR008250 (IPR008250 P-type ATPase, A domain superfamily) Jul 2009
Automated Process Approved IPR005834 (IPR005834 (DEPRECATED) Haloacid dehalogenase-like hydrolase) Jul 2009
Automated Process Approved IPR006068 (IPR006068 Cation-transporting P-type ATPase, C-terminal) Jul 2009
Protein Domains to toptop
Internal error getting result
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Automated Process Approved GO biological process GO:0008152 metabolic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR005834
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO biological process GO:0006812 cation transport GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR004014
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO biological process GO:0015693 magnesium ion transport GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR006415
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO biological process GO:0006754 ATP biosynthetic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR006415
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO cellular component GO:0016020 membrane GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001757
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO cellular component GO:0016021 integral component of membrane GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR006415
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0003824 catalytic activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR005834
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0016820 (DEPRECATED) hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR008250
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0005524 ATP binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001757
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0015444 P-type magnesium transporter activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR006415
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0015662 P-type ion transporter activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001757
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Approved name mgtA Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0013883
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Person Approved locus tag ECDH10B_4437 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu
Reference: Escherichia coli K-12 DH10B 		Feb 2008
Product
Person Approved product magnesium transporter Published Annotation - PubMed ID: 16397293
Reference: Escherichia coli K-12 		Mar 2007
Protein Family
Automated Process Approved protein family IPR004014 Cation-transporting P-type ATPase, N-terminal Protein Sequence Similarity - InterPro Domain: IPR004014
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR001757 P-type ATPase Protein Sequence Similarity - InterPro Domain: IPR001757
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR006415 P-type ATPase, subfamily IIIB Protein Sequence Similarity - InterPro Domain: IPR006415
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR000695 (DEPRECATED) ATPase, P-type, H+ transporting proton pump Protein Sequence Similarity - InterPro Domain: IPR000695
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR008250 P-type ATPase, A domain superfamily Protein Sequence Similarity - InterPro Domain: IPR008250
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR005834 (DEPRECATED) Haloacid dehalogenase-like hydrolase Protein Sequence Similarity - InterPro Domain: IPR005834
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR006068 Cation-transporting P-type ATPase, C-terminal Protein Sequence Similarity - InterPro Domain: IPR006068
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Other
Person Approved comment 100% identical to E. coli K-12 MG1655 feature ABE-0013883 Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0013883
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Gene Ontology
Automated Process Approved GO biological process GO:0008152 metabolic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR005834
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO biological process GO:0015693 magnesium ion transport GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR006415
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO biological process GO:0006754 ATP biosynthetic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR006415
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO biological process GO:0006812 cation transport GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR004014
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO cellular component GO:0016021 integral component of membrane GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR006415
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO cellular component GO:0016020 membrane GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001757
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0003824 catalytic activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR005834
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0015444 P-type magnesium transporter activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR006415
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0005524 ATP binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001757
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0015662 P-type ion transporter activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001757
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0016820 (DEPRECATED) hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR008250
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0000083 mgtA CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0000089 mgtA CDS
Ortholog
Automated Process Uncurated Go view Dickeya dadantii 3937 ABF-0017561 mgtA CDS
Automated Process Uncurated Go view Erwinia tasmaniensis Et1/99 [T] AFI-0003488 mgtB CDS
Automated Process Uncurated Go view Escherichia albertii TW07627 AFX-0001015 mgtA CDS
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0006973 mgtA CDS
Automated Process Uncurated Go view Escherichia coli 536 (UPEC) AEF-0004544 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0006711 mgtA CDS
Automated Process Uncurated Go view Escherichia coli APEC O1 (APEC) AEG-0004388 mgtA CDS
Automated Process Uncurated Go view Escherichia coli ATCC 8739 AEM-0009884 CDS
Automated Process Uncurated Go view Escherichia coli B171 (EPEC) ADN-0006059 mgtA CDS
Automated Process Uncurated Go view Escherichia coli B7A (ETEC) ADK-0007514 CDS
Automated Process Uncurated Go view Escherichia coli CFT073 (UPEC) ABR-0081554 mgtA CDS
Automated Process Uncurated Go view Escherichia coli E110019 (EPEC) ADM-0008328 mgtA CDS
Automated Process Uncurated Go view Escherichia coli E22 (EPEC) ADL-0007326 mgtA CDS
Automated Process Uncurated Go view Escherichia coli E2348/69 (EPEC) BCI-0004870 mgtA CDS
Automated Process Uncurated Go view Escherichia coli E24377A (ETEC) ADO-0009251 mgtA CDS
Automated Process Uncurated Go view Escherichia coli EC4024 (EHEC) BBI-0003507 CDS
Automated Process Uncurated Go view Escherichia coli EC4042 (EHEC) BBA-0009087 mgtA CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0007600 mgtA CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0009287 mgtA CDS
Automated Process Uncurated Go view Escherichia coli EC4113 (EHEC) BAY-0009168 mgtA CDS
Automated Process Uncurated Go view Escherichia coli EC4115 (EHEC) BAS-0010594 mgtA CDS
Automated Process Uncurated Go view Escherichia coli EC4196 (EHEC) BAX-0006681 mgtA CDS
Automated Process Uncurated Go view Escherichia coli EC4206 (EHEC) BAW-0008406 mgtA CDS
Automated Process Uncurated Go view Escherichia coli EC4401 (EHEC) BAV-0006763 mgtA CDS
Automated Process Uncurated Go view Escherichia coli EC4486 (EHEC) BAU-0005957 mgtA CDS
Automated Process Uncurated Go view Escherichia coli EC4501 (EHEC) BAT-0006097 mgtA CDS
Automated Process Uncurated Go view Escherichia coli EC508 (EHEC) BBJ-0005570 mgtA CDS
Automated Process Uncurated Go view Escherichia coli EC869 (EHEC) BBC-0005226 mgtA CDS
Automated Process Uncurated Go view Escherichia coli EDL933 (EHEC) ABH-0029423 mgtA CDS
Automated Process Uncurated Go view Escherichia coli F11 (UPEC) ADQ-0005720 mgtA CDS
Automated Process Uncurated Go view Escherichia coli HS ADR-0009185 mgtA CDS
Person Uncurated Go view Escherichia coli K-12 MG1655 ABE-0013883 mgtA CDS
Automated Process Uncurated Go view Escherichia coli K-12 W3110 ADY-0004333 mgtA CDS
Automated Process Uncurated Go view Escherichia coli SE11 AFS-0004652 CDS
Automated Process Uncurated Go view Escherichia coli SMS-3-5 AFT-0004715 mgtA CDS
Automated Process Uncurated Go view Escherichia coli Sakai (EHEC) ACA-0135336 mgtA CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0001262 CDS
Automated Process Uncurated Go view Escherichia coli UTI89 (UPEC) AEA-0004856 mgtA CDS
Automated Process Uncurated Go view Pectobacterium atrosepticum SCRI1043 ABL-0060650 mgtB CDS
Automated Process Uncurated Go view Pectobacterium brasiliensis 1692 AED-0000303 mgtB CDS
Automated Process Uncurated Go view Pectobacterium carotovorum WPP14 ADT-0002445 CDS
Automated Process Uncurated Go view Pectobacterium parmentieri WPP163 AFJ-0002858 mgtB CDS
Automated Process Uncurated Go view Shigella boydii 227 ADV-0004581 mgtA CDS
Automated Process Uncurated Go view Shigella boydii BS512 ADJ-0010258 mgtA CDS
Automated Process Uncurated Go view Shigella dysenteriae 1012 BAA-0006566 mgtA CDS
Automated Process Uncurated Go view Shigella dysenteriae 197 ADU-0004805 mgtA CDS
Automated Process Uncurated Go view Shigella flexneri 2457T ABQ-0075837 mgtA CDS
Automated Process Uncurated Go view Shigella flexneri 301 ABT-0090457 mgtA CDS
Automated Process Uncurated Go view Shigella flexneri 8401 BAG-0004517 mgtA CDS
Automated Process Uncurated Go view Shigella sonnei 046 ADD-0004800 mgtA CDS
Automated Process Uncurated Go view Yersinia pestis 91001 (biovar Microtus) ACQ-0238587 mgtB CDS
Automated Process Uncurated Go view Yersinia pestis Angola (biovar Pestoides) ADI-0006945 mgtA CDS
Automated Process Uncurated Go view Yersinia pestis Antiqua (biovar Antiqua) BAE-0002255 mgtB CDS
Automated Process Uncurated Go view Yersinia pestis B42003004 (biovar Antiqua) BAL-0005011 mgtA CDS
Automated Process Uncurated Go view Yersinia pestis CA88-4125 (biovar Orientalis) BAF-0001741 mgtB CDS
Automated Process Uncurated Go view Yersinia pestis CO92 (biovar Orientalis) ABY-0120804 mgtB CDS
Automated Process Uncurated Go view Yersinia pestis E1979001 (biovar Antiqua) BAM-0004793 mgtA CDS
Automated Process Uncurated Go view Yersinia pestis F1991016 (biovar Orientalis) BAQ-0005693 mgtA CDS
Automated Process Uncurated Go view Yersinia pestis FV-1 (biovar Orientalis) BAK-0002883 CDS
Automated Process Uncurated Go view Yersinia pestis IP275 (biovar Orientalis) BAC-0007814 mgtA CDS
Automated Process Uncurated Go view Yersinia pestis K1973002 (biovar Mediaevalis) BAO-0007595 mgtA CDS
Automated Process Uncurated Go view Yersinia pestis KIM (biovar Mediaevalis) ABI-0031516 mgtB CDS
Automated Process Uncurated Go view Yersinia pestis MG05-1020 (biovar Orientalis) BAP-0008687 mgtA CDS
Automated Process Uncurated Go view Yersinia pestis Nepal516 (biovar Antiqua) BAD-0002378 mgtB CDS
Automated Process Uncurated Go view Yersinia pestis Pestoides F (biovar Pestoides) BAI-0002147 CDS
Automated Process Uncurated Go view Yersinia pestis UG05-0454 (biovar Antiqua) BAN-0008000 mgtA CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP31758 ADS-0005600 mgtA CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP32953 ACZ-0002497 mgtB CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis PB1/+ AFV-0002975 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis YPIII AFW-0002046 CDS
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 4562456 to 4575152
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
AEC-0000001sourceforward14686137Contains
AEC-0003916nrdDCDScomplement45603534562491Upstream
AEC-0003917treCCDScomplement45628854564540Upstream
AEC-0003918treBCDScomplement45645904566011Upstream
AEC-0003919treRCDScomplement45661304567077Upstream
AEC-0003920mgtACDSforward45674564570152Matches
AEC-0003921yjgFCDScomplement45703584570744Downstream
AEC-0003922pyrICDScomplement45708174571278Downstream
AEC-0003923pyrBCDScomplement45712914572226Downstream
AEC-0003924pyrLCDScomplement45722304572364Downstream
AEC-0003925yjgHCDScomplement45726454573040Downstream
AEC-0003926yjgICDScomplement45731714573884Downstream
AEC-0003927yjgJCDSforward45739554574548Downstream
AEC-0003928yjgKCDSforward45746934575145Downstream
Release Notes to toptop
submitted to GenBank; assigned accession number CP000948