Escherichia coli K-12 DH10B
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Working With: Genome: Escherichia coli K-12 DH10B Version: 10

AEC-0003936 (pepA) - Escherichia coli K-12 DH10B - Feature Annotation

ASAP ID
AEC-0003936 showshow history
Names
pepA ECDH10B_4453
Product
aminopeptidase A, a cyteinylglycinase
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome complement 4584271 4585782 1512 504
Sequence

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Context

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Pre-Run Search Results
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InterProScan
BLASTP
Protein Families to toptop
Author Approval Family Annotated
Automated Process Approved IPR011356 (IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B) Jul 2009
Automated Process Approved IPR000819 (IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal) Jul 2009
Automated Process Approved IPR008283 (IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal) Jul 2009
Protein Domains to toptop
Internal error getting result
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Automated Process Approved GO biological process GO:0006508 proteolysis GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR000819
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO biological process GO:0019538 protein metabolic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR011356
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO cellular component GO:0005622 intracellular anatomical structure GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR000819
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO cellular component GO:0005737 cytoplasm GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR011356
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0030145 manganese ion binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR011356
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0004177 aminopeptidase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR011356
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0008235 metalloexopeptidase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR011356
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Approved name pepA Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0013953
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Person Approved locus tag ECDH10B_4453 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu
Reference: Escherichia coli K-12 DH10B 		Feb 2008
Product
Person Approved product aminopeptidase A, a cyteinylglycinase Published Annotation - PubMed ID: 16397293
Reference: Escherichia coli K-12 		Mar 2007
Protein Family
Automated Process Approved protein family IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B Protein Sequence Similarity - InterPro Domain: IPR011356
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal Protein Sequence Similarity - InterPro Domain: IPR000819
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal Protein Sequence Similarity - InterPro Domain: IPR008283
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Other
Person Approved comment 100% identical to E. coli K-12 MG1655 feature ABE-0013953 Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0013953
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Gene Ontology
Automated Process Approved GO biological process GO:0006508 proteolysis GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR000819
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO biological process GO:0019538 protein metabolic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR011356
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO cellular component GO:0005622 intracellular anatomical structure GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR000819
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO cellular component GO:0005737 cytoplasm GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR011356
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0030145 manganese ion binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR011356
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0004177 aminopeptidase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR011356
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0008235 metalloexopeptidase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR011356
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0000246 pepA CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0000216 pepA CDS
Ortholog
Automated Process Uncurated Go view Dickeya dadantii 3937 ABF-0016590 pepA CDS
Automated Process Uncurated Go view Erwinia tasmaniensis Et1/99 [T] AFI-0000405 pepA CDS
Automated Process Uncurated Go view Escherichia albertii TW07627 AFX-0001002 pepA CDS
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0006955 pepA CDS
Automated Process Uncurated Go view Escherichia coli 536 (UPEC) AEF-0004561 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0006692 pepA CDS
Automated Process Uncurated Go view Escherichia coli APEC O1 (APEC) AEG-0004404 pepA CDS
Automated Process Uncurated Go view Escherichia coli ATCC 8739 AEM-0009868 CDS
Automated Process Uncurated Go view Escherichia coli B171 (EPEC) ADN-0006041 pepA CDS
Automated Process Uncurated Go view Escherichia coli B7A (ETEC) ADK-0007530 PepA CDS
Automated Process Uncurated Go view Escherichia coli CFT073 (UPEC) ABR-0081574 pepA CDS
Automated Process Uncurated Go view Escherichia coli E110019 (EPEC) ADM-0008311 pepA CDS
Automated Process Uncurated Go view Escherichia coli E22 (EPEC) ADL-0007343 pepA CDS
Automated Process Uncurated Go view Escherichia coli E2348/69 (EPEC) BCI-0004886 pepA CDS
Automated Process Uncurated Go view Escherichia coli E24377A (ETEC) ADO-0009269 pepA CDS
Automated Process Uncurated Go view Escherichia coli EC4024 (EHEC) BBI-0003524 CDS
Automated Process Uncurated Go view Escherichia coli EC4042 (EHEC) BBA-0009103 pepA CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0007616 pepA CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0009304 pepA CDS
Automated Process Uncurated Go view Escherichia coli EC4115 (EHEC) BAS-0010611 pepA CDS
Automated Process Uncurated Go view Escherichia coli EC4196 (EHEC) BAX-0006665 pepA CDS
Automated Process Uncurated Go view Escherichia coli EC4206 (EHEC) BAW-0008423 pepA CDS
Automated Process Uncurated Go view Escherichia coli EC4401 (EHEC) BAV-0006780 pepA CDS
Automated Process Uncurated Go view Escherichia coli EC4486 (EHEC) BAU-0005974 pepA CDS
Automated Process Uncurated Go view Escherichia coli EC4501 (EHEC) BAT-0006115 pepA CDS
Automated Process Uncurated Go view Escherichia coli EC508 (EHEC) BBJ-0005587 pepA CDS
Automated Process Uncurated Go view Escherichia coli EC869 (EHEC) BBC-0005243 pepA CDS
Automated Process Uncurated Go view Escherichia coli EDL933 (EHEC) ABH-0029443 pepA CDS
Automated Process Uncurated Go view Escherichia coli F11 (UPEC) ADQ-0005702 pepA CDS
Automated Process Uncurated Go view Escherichia coli HS ADR-0009204 pepA CDS
Person Uncurated Go view Escherichia coli K-12 MG1655 ABE-0013953 pepA CDS
Automated Process Uncurated Go view Escherichia coli K-12 W3110 ADY-0004349 pepA CDS
Automated Process Uncurated Go view Escherichia coli SE11 AFS-0004670 CDS
Automated Process Uncurated Go view Escherichia coli SMS-3-5 AFT-0004732 pepA CDS
Automated Process Uncurated Go view Escherichia coli Sakai (EHEC) ACA-0135354 pepA CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0001279 CDS
Automated Process Uncurated Go view Escherichia coli UTI89 (UPEC) AEA-0004875 pepA CDS
Automated Process Uncurated Go view Pectobacterium atrosepticum SCRI1043 ABL-0060622 pepA CDS
Automated Process Uncurated Go view Pectobacterium brasiliensis 1692 AED-0000264 pepA CDS
Automated Process Uncurated Go view Pectobacterium carotovorum WPP14 ADT-0000132 pepA CDS
Automated Process Uncurated Go view Pectobacterium parmentieri WPP163 AFJ-0002812 pepA CDS
Automated Process Uncurated Go view Salmonella Agona SL483 BBX-0008923 pepA CDS
Automated Process Uncurated Go view Salmonella Arizonae CDC 346-86 BCD-0003320 CDS
Automated Process Uncurated Go view Salmonella Choleraesuis SC-B67 ADB-0005108 pepA CDS
Automated Process Uncurated Go view Salmonella Dublin CT_02021853 BCB-0009101 pepA CDS
Automated Process Uncurated Go view Salmonella Enteritidis P125109 BCF-0013979 pepA CDS
Automated Process Uncurated Go view Salmonella Gallinarum 287/91 BCG-0013222 pepA CDS
Automated Process Uncurated Go view Salmonella Hadar RI_05P066 BBT-0006959 pepA CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL476 BBV-0009236 pepA CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL486 BBW-0007684 pepA CDS
Automated Process Uncurated Go view Salmonella Javiana GA_MM04042433 BCA-0004209 pepA CDS
Automated Process Uncurated Go view Salmonella Kentucky CVM29188 BBP-0008287 pepA CDS
Automated Process Uncurated Go view Salmonella Newport SL254 BBQ-0009171 pepA CDS
Automated Process Uncurated Go view Salmonella Newport SL317 BBR-0006210 pepA CDS
Automated Process Uncurated Go view Salmonella Paratyphi A AKU_12601 BCH-0004311 CDS
Automated Process Uncurated Go view Salmonella Paratyphi A ATCC 9150 ADA-0004273 pepA CDS
Automated Process Uncurated Go view Salmonella Paratyphi B SPB7 BCC-0005660 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA23 BBN-0004543 pepA CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA29 BBM-0006527 pepA CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund CVM19633 BBO-0008794 pepA CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund SL480 BBY-0004122 pepA CDS
Automated Process Uncurated Go view Salmonella Typhi CT18 ABX-0115065 pepA CDS
Automated Process Uncurated Go view Salmonella Typhi Ty2 ABS-0086238 pepA CDS
Automated Process Uncurated Go view Salmonella Typhimurium LT2 [T] ABU-0103759 pepA CDS
Automated Process Uncurated Go view Salmonella Virchow SL491 BBS-0004656 pepA CDS
Automated Process Uncurated Go view Salmonella Weltevreden SL484 BBU-0007371 pepA CDS
Automated Process Uncurated Go view Salmonella enterica CVM23701 BBL-0005604 pepA CDS
Automated Process Uncurated Go view Shigella boydii 227 ADV-0004554 pepA CDS
Automated Process Uncurated Go view Shigella boydii BS512 ADJ-0010238 pepA CDS
Automated Process Uncurated Go view Shigella dysenteriae 1012 BAA-0006550 pepA CDS
Automated Process Uncurated Go view Shigella dysenteriae 197 ADU-0004833 pepA CDS
Automated Process Uncurated Go view Shigella flexneri 2457T ABQ-0075815 pepA CDS
Automated Process Uncurated Go view Shigella flexneri 301 ABT-0090439 pepA CDS
Automated Process Uncurated Go view Shigella flexneri 8401 BAG-0004499 pepA CDS
Automated Process Uncurated Go view Shigella sonnei 046 ADD-0004827 pepA CDS
Automated Process Uncurated Go view Yersinia bercovieri ATCC 43970 [T] AEK-0002750 CDS
Automated Process Uncurated Go view Yersinia enterocolitica 8081 BAH-0001542 carP CDS
Automated Process Uncurated Go view Yersinia frederiksenii ATCC 33641 [T] AEI-0002191 carP CDS
Automated Process Uncurated Go view Yersinia intermedia ATCC 29909 [T] AEH-0001581 pepA CDS
Automated Process Uncurated Go view Yersinia mollaretii ATCC 43969 [T] AEJ-0002824 CDS
Automated Process Uncurated Go view Yersinia pestis 91001 (biovar Microtus) ACQ-0235645 pepA CDS
Automated Process Uncurated Go view Yersinia pestis Angola (biovar Pestoides) ADI-0008173 pepA CDS
Automated Process Uncurated Go view Yersinia pestis Antiqua (biovar Antiqua) BAE-0003523 pepA CDS
Automated Process Uncurated Go view Yersinia pestis B42003004 (biovar Antiqua) BAL-0008428 pepA CDS
Automated Process Uncurated Go view Yersinia pestis CA88-4125 (biovar Orientalis) BAF-0003917 pepA CDS
Automated Process Uncurated Go view Yersinia pestis CO92 (biovar Orientalis) ABY-0126936 pepA CDS
Automated Process Uncurated Go view Yersinia pestis E1979001 (biovar Antiqua) BAM-0006353 pepA CDS
Automated Process Uncurated Go view Yersinia pestis F1991016 (biovar Orientalis) BAQ-0005841 pepA CDS
Automated Process Uncurated Go view Yersinia pestis FV-1 (biovar Orientalis) BAK-0001902 CDS
Automated Process Uncurated Go view Yersinia pestis IP275 (biovar Orientalis) BAC-0005830 pepA CDS
Automated Process Uncurated Go view Yersinia pestis K1973002 (biovar Mediaevalis) BAO-0004181 pepA CDS
Automated Process Uncurated Go view Yersinia pestis KIM (biovar Mediaevalis) ABI-0030379 pepA CDS
Automated Process Uncurated Go view Yersinia pestis MG05-1020 (biovar Orientalis) BAP-0006584 pepA CDS
Automated Process Uncurated Go view Yersinia pestis Nepal516 (biovar Antiqua) BAD-0000798 pepA CDS
Automated Process Uncurated Go view Yersinia pestis Pestoides F (biovar Pestoides) BAI-0003891 CDS
Automated Process Uncurated Go view Yersinia pestis UG05-0454 (biovar Antiqua) BAN-0005006 pepA CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP31758 ADS-0007562 pepA CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP32953 ACZ-0000569 pepA CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis PB1/+ AFV-0000664 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis YPIII AFW-0004365 CDS
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 4579271 to 4590782
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
AEC-0000001sourceforward14686137Contains
AEC-0003932yjgMCDScomplement45788654579368Downstream
AEC-0003933yjgNCDSforward45795614580757Downstream
AEC-0003934valSCDScomplement45808134583668Downstream
AEC-0003935holCCDScomplement45836684584111Downstream
AEC-0003936pepACDScomplement45842714585782Matches
AEC-0003937yjgPCDSforward45860494587149Upstream
AEC-0003938yjgQCDSforward45871494588231Upstream
AEC-0003939yjgRCDScomplement45883924589894Upstream
AEC-0003940idnRCDScomplement45899724590970Upstream
Release Notes to toptop
submitted to GenBank; assigned accession number CP000948