Escherichia coli K-12 DH10B
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Working With: Genome: Escherichia coli K-12 DH10B Version: 10

AEC-0003998 (yjjG) - Escherichia coli K-12 DH10B - Feature Annotation

ASAP ID
AEC-0003998 showshow history
Names
yjjG ECDH10B_4531
Product
predicted hydrolase
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome forward 4653131 4653808 678 226
Sequence

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Context

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Pre-Run Search Results
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InterProScan
BLASTP
Protein Families to toptop
Author Approval Family Annotated
Automated Process Approved IPR011951 (IPR011951 HAD-superfamily hydrolase, subfamily IA, YjjG/PynA) Jul 2009
Automated Process Approved IPR006439 (IPR006439 HAD hydrolase, subfamily IA) Jul 2009
Automated Process Approved IPR006402 (IPR006402 (DEPRECATED) HAD-superfamily hydrolase, subfamily IA, variant 3) Jul 2009
Automated Process Approved IPR005834 (IPR005834 (DEPRECATED) Haloacid dehalogenase-like hydrolase) Jul 2009
Protein Domains to toptop
Internal error getting result
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Automated Process Approved GO biological process GO:0008152 metabolic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR006439
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0003824 catalytic activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR005834
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0008967 phosphoglycolate phosphatase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR006439
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Approved name yjjG Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0014344
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Person Approved locus tag ECDH10B_4531 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu
Reference: Escherichia coli K-12 DH10B 		Feb 2008
Product
Person Approved product predicted hydrolase Published Annotation - PubMed ID: 16397293
Reference: Escherichia coli K-12 		Mar 2007
Protein Family
Automated Process Approved protein family IPR006439 HAD hydrolase, subfamily IA Protein Sequence Similarity - InterPro Domain: IPR006439
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR011951 HAD-superfamily hydrolase, subfamily IA, YjjG/PynA Protein Sequence Similarity - InterPro Domain: IPR011951
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR006402 (DEPRECATED) HAD-superfamily hydrolase, subfamily IA, variant 3 Protein Sequence Similarity - InterPro Domain: IPR006402
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR005834 (DEPRECATED) Haloacid dehalogenase-like hydrolase Protein Sequence Similarity - InterPro Domain: IPR005834
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Other
Person Approved comment 100% identical to E. coli K-12 MG1655 feature ABE-0014344 Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0014344
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Gene Ontology
Automated Process Approved GO biological process GO:0008152 metabolic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR006439
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0008967 phosphoglycolate phosphatase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR006439
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0003824 catalytic activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR005834
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0001988 yjjG CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0002199 yjjG CDS
Ortholog
Automated Process Uncurated Go view Erwinia tasmaniensis Et1/99 [T] AFI-0000649 yjjG CDS
Automated Process Uncurated Go view Escherichia albertii TW07627 AFX-0000890 yjjG CDS
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0008570 yjjG CDS
Automated Process Uncurated Go view Escherichia coli 536 (UPEC) AEF-0004758 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0006612 yjjG CDS
Automated Process Uncurated Go view Escherichia coli APEC O1 (APEC) AEG-0004486 yjjG CDS
Automated Process Uncurated Go view Escherichia coli ATCC 8739 AEM-0009787 CDS
Automated Process Uncurated Go view Escherichia coli B7A (ETEC) ADK-0007652 CDS
Automated Process Uncurated Go view Escherichia coli CFT073 (UPEC) ABR-0081673 yjjG CDS
Automated Process Uncurated Go view Escherichia coli E110019 (EPEC) ADM-0009202 yjjG CDS
Automated Process Uncurated Go view Escherichia coli E22 (EPEC) ADL-0009510 yjjG CDS
Automated Process Uncurated Go view Escherichia coli E2348/69 (EPEC) BCI-0004978 yjjG CDS
Automated Process Uncurated Go view Escherichia coli E24377A (ETEC) ADO-0009404 yjjG CDS
Automated Process Uncurated Go view Escherichia coli EC4024 (EHEC) BBI-0002898 CDS
Automated Process Uncurated Go view Escherichia coli EC4042 (EHEC) BBA-0009207 yjjG CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0007720 yjjG CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0008224 yjjG CDS
Automated Process Uncurated Go view Escherichia coli EC4113 (EHEC) BAY-0009094 yjjG CDS
Automated Process Uncurated Go view Escherichia coli EC4115 (EHEC) BAS-0010716 yjjG CDS
Automated Process Uncurated Go view Escherichia coli EC4196 (EHEC) BAX-0009226 yjjG CDS
Automated Process Uncurated Go view Escherichia coli EC4206 (EHEC) BAW-0008528 yjjG CDS
Automated Process Uncurated Go view Escherichia coli EC4401 (EHEC) BAV-0008726 yjjG CDS
Automated Process Uncurated Go view Escherichia coli EC4486 (EHEC) BAU-0006081 yjjG CDS
Automated Process Uncurated Go view Escherichia coli EC4501 (EHEC) BAT-0008308 yjjG CDS
Automated Process Uncurated Go view Escherichia coli EC508 (EHEC) BBJ-0005696 yjjG CDS
Automated Process Uncurated Go view Escherichia coli EC869 (EHEC) BBC-0005356 yjjG CDS
Automated Process Uncurated Go view Escherichia coli EDL933 (EHEC) ABH-0029546 yjjG CDS
Automated Process Uncurated Go view Escherichia coli F11 (UPEC) ADQ-0009876 yjjG CDS
Automated Process Uncurated Go view Escherichia coli HS ADR-0009295 yjjG CDS
Person Uncurated Go view Escherichia coli K-12 MG1655 ABE-0014344 yjjG CDS
Automated Process Uncurated Go view Escherichia coli K-12 W3110 ADY-0004472 yjjG CDS
Automated Process Uncurated Go view Escherichia coli SE11 AFS-0004756 CDS
Automated Process Uncurated Go view Escherichia coli SMS-3-5 AFT-0004912 yjjG CDS
Automated Process Uncurated Go view Escherichia coli Sakai (EHEC) ACA-0135454 yjjG CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0001385 CDS
Automated Process Uncurated Go view Escherichia coli UTI89 (UPEC) AEA-0005092 yjjG CDS
Automated Process Uncurated Go view Salmonella Agona SL483 BBX-0009038 yjjG CDS
Automated Process Uncurated Go view Salmonella Arizonae CDC 346-86 BCD-0003174 CDS
Automated Process Uncurated Go view Salmonella Choleraesuis SC-B67 ADB-0005212 yjjG CDS
Automated Process Uncurated Go view Salmonella Dublin CT_02021853 BCB-0009211 yjjG CDS
Automated Process Uncurated Go view Salmonella Enteritidis P125109 BCF-0014240 yjjG CDS
Automated Process Uncurated Go view Salmonella Gallinarum 287/91 BCG-0013457 yjjG CDS
Automated Process Uncurated Go view Salmonella Hadar RI_05P066 BBT-0006877 yjjG CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL476 BBV-0009320 yjjG CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL486 BBW-0008143 yjjG CDS
Automated Process Uncurated Go view Salmonella Javiana GA_MM04042433 BCA-0004291 yjjG CDS
Automated Process Uncurated Go view Salmonella Kentucky CDC 191 BBZ-0004772 yjjG CDS
Automated Process Uncurated Go view Salmonella Kentucky CVM29188 BBP-0008383 yjjG CDS
Automated Process Uncurated Go view Salmonella Newport SL254 BBQ-0009260 yjjG CDS
Automated Process Uncurated Go view Salmonella Newport SL317 BBR-0006105 yjjG CDS
Automated Process Uncurated Go view Salmonella Paratyphi A AKU_12601 BCH-0004408 CDS
Automated Process Uncurated Go view Salmonella Paratyphi A ATCC 9150 ADA-0004368 yjjG CDS
Automated Process Uncurated Go view Salmonella Paratyphi B SPB7 BCC-0005761 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA23 BBN-0004634 yjjG CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA29 BBM-0007415 yjjG CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund CVM19633 BBO-0008873 yjjG CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund SL480 BBY-0004199 yjjG CDS
Automated Process Uncurated Go view Salmonella Typhi CT18 ABX-0115218 CDS
Automated Process Uncurated Go view Salmonella Typhi Ty2 ABS-0086328 CDS
Automated Process Uncurated Go view Salmonella Typhimurium LT2 [T] ABU-0103978 yjjG CDS
Automated Process Uncurated Go view Salmonella Virchow SL491 BBS-0004556 yjjG CDS
Automated Process Uncurated Go view Salmonella Weltevreden SL484 BBU-0008274 yjjG CDS
Automated Process Uncurated Go view Salmonella enterica CVM23701 BBL-0004249 yjjG CDS
Automated Process Uncurated Go view Shigella boydii 227 ADV-0004837 yjjG CDS
Automated Process Uncurated Go view Shigella boydii BS512 ADJ-0010334 yjjG CDS
Automated Process Uncurated Go view Shigella dysenteriae 1012 BAA-0006928 yjjG CDS
Automated Process Uncurated Go view Shigella dysenteriae 197 ADU-0005255 yjjG CDS
Automated Process Uncurated Go view Shigella flexneri 2457T ABQ-0076025 yjjG CDS
Automated Process Uncurated Go view Shigella flexneri 301 ABT-0090619 yjjG CDS
Automated Process Uncurated Go view Shigella flexneri 8401 BAG-0004684 yjjG CDS
Automated Process Uncurated Go view Shigella sonnei 046 ADD-0004919 yjjG CDS
Automated Process Uncurated Go view Yersinia bercovieri ATCC 43970 [T] AEK-0003144 CDS
Automated Process Uncurated Go view Yersinia enterocolitica 8081 BAH-0006061 CDS
Automated Process Uncurated Go view Yersinia frederiksenii ATCC 33641 [T] AEI-0001003 yjjG CDS
Automated Process Uncurated Go view Yersinia intermedia ATCC 29909 [T] AEH-0000656 yjjG CDS
Automated Process Uncurated Go view Yersinia mollaretii ATCC 43969 [T] AEJ-0000454 CDS
Automated Process Uncurated Go view Yersinia pestis 91001 (biovar Microtus) ACQ-0239272 CDS
Automated Process Uncurated Go view Yersinia pestis Angola (biovar Pestoides) ADI-0006402 CDS
Automated Process Uncurated Go view Yersinia pestis Antiqua (biovar Antiqua) BAE-0001984 CDS
Automated Process Uncurated Go view Yersinia pestis B42003004 (biovar Antiqua) BAL-0004785 CDS
Automated Process Uncurated Go view Yersinia pestis CA88-4125 (biovar Orientalis) BAF-0001163 CDS
Automated Process Uncurated Go view Yersinia pestis CO92 (biovar Orientalis) ABY-0122898 CDS
Automated Process Uncurated Go view Yersinia pestis E1979001 (biovar Antiqua) BAM-0007073 CDS
Automated Process Uncurated Go view Yersinia pestis F1991016 (biovar Orientalis) BAQ-0007505 CDS
Automated Process Uncurated Go view Yersinia pestis FV-1 (biovar Orientalis) BAK-0002504 CDS
Automated Process Uncurated Go view Yersinia pestis IP275 (biovar Orientalis) BAC-0007970 CDS
Automated Process Uncurated Go view Yersinia pestis K1973002 (biovar Mediaevalis) BAO-0005940 CDS
Automated Process Uncurated Go view Yersinia pestis KIM (biovar Mediaevalis) ABI-0031835 CDS
Automated Process Uncurated Go view Yersinia pestis MG05-1020 (biovar Orientalis) BAP-0008159 CDS
Automated Process Uncurated Go view Yersinia pestis Nepal516 (biovar Antiqua) BAD-0002114 CDS
Automated Process Uncurated Go view Yersinia pestis Pestoides F (biovar Pestoides) BAI-0001011 CDS
Automated Process Uncurated Go view Yersinia pestis UG05-0454 (biovar Antiqua) BAN-0007078 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP31758 ADS-0005808 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP32953 ACZ-0002302 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis PB1/+ AFV-0002729 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis YPIII AFW-0002303 CDS
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 4648131 to 4658808
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
AEC-0000001sourceforward14686137Contains
AEC-0003992yjjQCDSforward46479624648687Upstream
AEC-0003993bglJCDSforward46486454649322Upstream
AEC-0003994fhuFCDScomplement46493604650148Upstream
AEC-0004108yjjZCDSforward46502894650525Upstream
AEC-0004193leuVtRNAcomplement46505644650650Upstream
AEC-0004194leuPtRNAcomplement46506854650771Upstream
AEC-0004195leuQtRNAcomplement46508004650886Upstream
AEC-0003995rsmCCDScomplement46511544652185Upstream
AEC-0003996holDCDSforward46522884652701Upstream
AEC-0003997rimICDSforward46526704653116Upstream
AEC-0003998yjjGCDSforward46531314653808Matches
AEC-0003999prfCCDSforward46538994655488Downstream
AEC-0004000osmYCDSforward46558814656486Downstream
AEC-0004109ytjACDSforward46565954656774Downstream
AEC-0004001yjjUCDSforward46568964657969Downstream
AEC-0004002yjjVCDSforward46579664658745Downstream
Release Notes to toptop
submitted to GenBank; assigned accession number CP000948