Escherichia coli K-12 DH10B
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Working With: Genome: Escherichia coli K-12 DH10B Version: 10

AEC-0004441 (grxB) - Escherichia coli K-12 DH10B - Feature Annotation

ASAP ID
AEC-0004441
Names
grxB ECDH10B_1135
Product
glutaredoxin 2
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome complement 1178075 1178722 648 216
Sequence

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Context

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Pre-Run Search Results
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InterProScan
BLASTP
Protein Families to toptop
Author Approval Family Annotated
Automated Process Approved IPR010987 (IPR010987 Glutathione S-transferase, C-terminal-like) Jul 2009
Automated Process Approved IPR012336 (IPR012336 Thioredoxin-like fold) Jul 2009
Automated Process Approved IPR011901 (IPR011901 Glutaredoxin-2) Jul 2009
Automated Process Approved IPR004045 (IPR004045 Glutathione S-transferase, N-terminal) Jul 2009
Automated Process Approved IPR007494 (IPR007494 Glutaredoxin 2, C-terminal) Jul 2009
Automated Process Approved IPR011767 (IPR011767 Glutaredoxin active site) Jul 2009
Automated Process Approved IPR012335 (IPR012335 (DEPRECATED) Thioredoxin fold) Jul 2009
Protein Domains to toptop
Internal error getting result
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Automated Process Approved GO biological process GO:0045454 cell redox homeostasis GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR011767
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0015035 protein-disulfide reductase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR011901
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0009055 electron transfer activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR011901
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Approved name grxB Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0003615
Reference: Escherichia coli K-12 MG1655 		Jan 2008
Person Approved locus tag ECDH10B_1135 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu
Reference: Escherichia coli K-12 DH10B 		Feb 2008
Product
Person Approved product glutaredoxin 2 Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0003615
Reference: Escherichia coli K-12 MG1655 		Jan 2008
Protein Family
Automated Process Approved protein family IPR004045 Glutathione S-transferase, N-terminal Protein Sequence Similarity - InterPro Domain: IPR004045
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR007494 Glutaredoxin 2, C-terminal Protein Sequence Similarity - InterPro Domain: IPR007494
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR011767 Glutaredoxin active site Protein Sequence Similarity - InterPro Domain: IPR011767
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR012335 (DEPRECATED) Thioredoxin fold Protein Sequence Similarity - InterPro Domain: IPR012335
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR011901 Glutaredoxin-2 Protein Sequence Similarity - InterPro Domain: IPR011901
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR012336 Thioredoxin-like fold Protein Sequence Similarity - InterPro Domain: IPR012336
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR010987 Glutathione S-transferase, C-terminal-like Protein Sequence Similarity - InterPro Domain: IPR010987
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Other
Person Uncurated note contains the nonsynonymous change E167K Protein Sequence Similarity - ASAP FeatureID: ABE-0003615
Reference: Escherichia coli K-12 DH10B 		Jan 2008
Gene Ontology
Automated Process Approved GO biological process GO:0045454 cell redox homeostasis GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR011767
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0009055 electron transfer activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR011901
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0015035 protein-disulfide reductase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR011901
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0002532 grxB CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0002445 grxB CDS
Ortholog
Automated Process Uncurated Go view Dickeya dadantii 3937 ABF-0017048 grxB CDS
Automated Process Uncurated Go view Erwinia tasmaniensis Et1/99 [T] AFI-0002114 grxB CDS
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0007217 grxB CDS
Automated Process Uncurated Go view Escherichia coli 536 (UPEC) AEF-0001066 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0005413 grxB CDS
Automated Process Uncurated Go view Escherichia coli APEC O1 (APEC) AEG-0000981 grxB CDS
Automated Process Uncurated Go view Escherichia coli ATCC 8739 AEM-0008363 CDS
Automated Process Uncurated Go view Escherichia coli B171 (EPEC) ADN-0008083 grxB CDS
Automated Process Uncurated Go view Escherichia coli B7A (ETEC) ADK-0008872 CDS
Automated Process Uncurated Go view Escherichia coli CFT073 (UPEC) ABR-0077435 grxB CDS
Automated Process Uncurated Go view Escherichia coli E110019 (EPEC) ADM-0007880 grxB CDS
Automated Process Uncurated Go view Escherichia coli E22 (EPEC) ADL-0008364 grxB CDS
Automated Process Uncurated Go view Escherichia coli E2348/69 (EPEC) BCI-0001226 grxB CDS
Automated Process Uncurated Go view Escherichia coli E24377A (ETEC) ADO-0005630 grxB CDS
Automated Process Uncurated Go view Escherichia coli EC4024 (EHEC) BBI-0005285 CDS
Automated Process Uncurated Go view Escherichia coli EC4042 (EHEC) BBA-0010157 grxB CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0009191 grxB CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0010106 grxB CDS
Automated Process Uncurated Go view Escherichia coli EC4113 (EHEC) BAY-0005354 grxB CDS
Automated Process Uncurated Go view Escherichia coli EC4115 (EHEC) BAS-0006283 grxB CDS
Automated Process Uncurated Go view Escherichia coli EC4196 (EHEC) BAX-0006552 grxB CDS
Automated Process Uncurated Go view Escherichia coli EC4206 (EHEC) BAW-0010064 grxB CDS
Automated Process Uncurated Go view Escherichia coli EC4401 (EHEC) BAV-0010558 grxB CDS
Automated Process Uncurated Go view Escherichia coli EC4486 (EHEC) BAU-0007148 grxB CDS
Automated Process Uncurated Go view Escherichia coli EC4501 (EHEC) BAT-0010020 grxB CDS
Automated Process Uncurated Go view Escherichia coli EC508 (EHEC) BBJ-0009712 grxB CDS
Automated Process Uncurated Go view Escherichia coli EC869 (EHEC) BBC-0010256 grxB CDS
Automated Process Uncurated Go view Escherichia coli EDL933 (EHEC) ABH-0025502 grxB CDS
Automated Process Uncurated Go view Escherichia coli F11 (UPEC) ADQ-0007533 grxB CDS
Automated Process Uncurated Go view Escherichia coli HS ADR-0005863 grxB CDS
Automated Process Uncurated Go view Escherichia coli K-12 MG1655 ABE-0003615 grxB CDS
Automated Process Uncurated Go view Escherichia coli K-12 W3110 ADY-0001075 grxB CDS
Automated Process Uncurated Go view Escherichia coli SE11 AFS-0001154 CDS
Automated Process Uncurated Go view Escherichia coli SMS-3-5 AFT-0002064 grxB CDS
Automated Process Uncurated Go view Escherichia coli Sakai (EHEC) ACA-0131389 grxB CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0000418 CDS
Automated Process Uncurated Go view Escherichia coli UTI89 (UPEC) AEA-0001192 grxB CDS
Automated Process Uncurated Go view Pectobacterium atrosepticum SCRI1043 ABL-0062789 grxB CDS
Automated Process Uncurated Go view Pectobacterium brasiliensis 1692 AED-0001282 grxB CDS
Automated Process Uncurated Go view Pectobacterium carotovorum WPP14 ADT-0001846 grxB CDS
Automated Process Uncurated Go view Pectobacterium parmentieri WPP163 AFJ-0003894 grxB CDS
Automated Process Uncurated Go view Salmonella Agona SL483 BBX-0006197 grxB CDS
Automated Process Uncurated Go view Salmonella Arizonae CDC 346-86 BCD-0001917 CDS
Automated Process Uncurated Go view Salmonella Choleraesuis SC-B67 ADB-0001320 grxB CDS
Automated Process Uncurated Go view Salmonella Dublin CT_02021853 BCB-0006475 grxB CDS
Automated Process Uncurated Go view Salmonella Enteritidis P125109 BCF-0006129 grxB CDS
Automated Process Uncurated Go view Salmonella Gallinarum 287/91 BCG-0005913 grxB CDS
Automated Process Uncurated Go view Salmonella Hadar RI_05P066 BBT-0008415 grxB CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL476 BBV-0005641 grxB CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL486 BBW-0008343 grxB CDS
Automated Process Uncurated Go view Salmonella Javiana GA_MM04042433 BCA-0008063 grxB CDS
Automated Process Uncurated Go view Salmonella Kentucky CDC 191 BBZ-0008339 grxB CDS
Automated Process Uncurated Go view Salmonella Kentucky CVM29188 BBP-0004733 grxB CDS
Automated Process Uncurated Go view Salmonella Newport SL254 BBQ-0005631 grxB CDS
Automated Process Uncurated Go view Salmonella Newport SL317 BBR-0008390 grxB CDS
Automated Process Uncurated Go view Salmonella Paratyphi A AKU_12601 BCH-0001698 CDS
Automated Process Uncurated Go view Salmonella Paratyphi A ATCC 9150 ADA-0001686 grxB CDS
Automated Process Uncurated Go view Salmonella Paratyphi B SPB7 BCC-0002377 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA23 BBN-0005810 grxB CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA29 BBM-0008139 grxB CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund CVM19633 BBO-0005321 grxB CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund SL480 BBY-0006513 grxB CDS
Automated Process Uncurated Go view Salmonella Typhi CT18 ABX-0107526 grxB CDS
Automated Process Uncurated Go view Salmonella Typhi Ty2 ABS-0083469 grxB CDS
Automated Process Uncurated Go view Salmonella Typhimurium LT2 [T] ABU-0094055 grxB CDS
Automated Process Uncurated Go view Salmonella Virchow SL491 BBS-0008286 grxB CDS
Automated Process Uncurated Go view Salmonella Weltevreden SL484 BBU-0008755 grxB CDS
Automated Process Uncurated Go view Salmonella enterica CVM23701 BBL-0008113 grxB CDS
Automated Process Uncurated Go view Shigella boydii 227 ADV-0002216 grxB CDS
Automated Process Uncurated Go view Shigella boydii BS512 ADJ-0007674 grxB CDS
Automated Process Uncurated Go view Shigella dysenteriae 1012 BAA-0004773 grxB CDS
Automated Process Uncurated Go view Shigella dysenteriae 197 ADU-0002405 grxB CDS
Automated Process Uncurated Go view Shigella flexneri 2457T ABQ-0072200 grxB CDS
Automated Process Uncurated Go view Shigella flexneri 301 ABT-0087417 grxB CDS
Automated Process Uncurated Go view Shigella flexneri 8401 BAG-0001157 grxB CDS
Automated Process Uncurated Go view Shigella sonnei 046 ADD-0001170 grxB CDS
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 1173075 to 1183722
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
AEC-0000001sourceforward14686137Contains
AEC-0001009yceICDScomplement11725691173144Downstream
AEC-0001010yceJCDScomplement11731481173714Downstream
AEC-0001011yceOCDScomplement11739751174115Downstream
AEC-0001012solACDScomplement11741361175254Downstream
AEC-0001013bssSCDScomplement11753691175623Downstream
AEC-0001014dinICDScomplement11759101176155Downstream
AEC-0001015pyrCCDScomplement11762291177275Downstream
AEC-0001016yceBCDScomplement11773811177941Downstream
AEC-0004441grxBCDScomplement11780751178722Matches
AEC-0001017mdtHCDScomplement11787861179994Upstream
AEC-0001018rimJCDSforward11802301180814Upstream
AEC-0001019yceHCDSforward11808251181472Upstream
AEC-0001020mviMCDSforward11814741182397Upstream
AEC-0001021yceNCDSforward11825071184042Upstream
Release Notes to toptop
submitted to GenBank; assigned accession number CP000948