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Report for CCDS10171.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10171.1 Public Homo sapiens 15 LDHAL6B 24 110 108 CCDS HistoryNCBI Gene:92483Re-query CCDS DB by CCDS ID:10171.1Re-query CCDS DB by GeneID:92483See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10171.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000307144.6 ENSP00000302393.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000307144.6Link to Ensembl Protein Viewer:ENSP00000302393.4Re-query CCDS DB by Nucleotide ID:ENST00000307144Re-query CCDS DB by Protein ID:ENSP00000302393
Original member Current member NCBI NM_033195.3 NP_149972.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_033195.3Link to Protein Sequence:NP_149972.1Re-query CCDS DB by Nucleotide ID:NM_033195Re-query CCDS DB by Protein ID:NP_149972Link to BLAST:NP_149972.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_149972.1 381 Q9BYZ2 381 100% 0 0

Chromosomal Locations for CCDS 10171.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 59206941 59208086 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1146 nt):
ATGAGTTGGACTGTGCCTGTTGTGCGGGCCAGCCAGAGAGTGAGCTCGGTGGGAGCGAATTTCCTATGCC
TG
GGGATGGCCCTGTGTCCGCGTCAAGCAACGCGCATCCCGCTCAACGGCACCTGGCTCTTCACCCCCGT
G
AGCAAGATGGCGACTGTGAAGAGTGAGCTTATTGAGCGTTTCACTTCCGAGAAGCCCGTTCATCACAGT
AAG
GTCTCCATCATAGGAACTGGATCGGTGGGCATGGCCTGCGCTATCAGCATCTTATTAAAAGGCTTGA
GT
GATGAACTTGCCCTTGTGGATCTTGATGAAGACAAACTGAAGGGTGAGACGATGGATCTTCAACATGG
C
AGCCCTTTCACGAAAATGCCAAATATTGTTTGTAGCAAAGATTACTTTGTCACAGCAAACTCCAACCTA
GTG
ATTATCACAGCAGGTGCACGCCAAGAAAAGGGAGAAACGCGCCTTAATTTAGTCCAGCGAAATGTGG
CC
ATCTTCAAGTTAATGATTTCCAGTATTGTCCAGTACAGCCCCCACTGCAAACTGATTATTGTTTCCAA
T
CCAGTGGATATCTTAACTTATGTAGCTTGGAAGTTGAGTGCATTTCCCAAAAACCGTATTATTGGAAGC
GGC
TGTAATCTGGATACTGCTCGTTTTCGTTTCTTGATTGGACAAAAGCTTGGTATCCATTCTGAAAGCT
GC
CATGGATGGATCCTCGGAGAGCATGGAGACTCAAGTGTTCCTGTGTGGAGTGGAGTGAACATAGCTGG
T
GTCCCTTTGAAGGATCTGAACTCTGATATAGGAACTGATAAAGATCCTGAGCAATGGAAAAATGTCCAC
AAA
GAAGTGACTGCAACTGCCTATGAGATTATTAAAATGAAAGGTTATACTTCTTGGGCCATTGGCCTAT
CT
GTGGCCGATTTAACAGAAAGTATTTTGAAGAATCTTAGGAGAATACATCCAGTTTCCACCATAATTAA
G
GGCCTCTATGGAATAGATGAAGAAGTATTCCTCAGTATTCCTTGTATCCTGGGAGAGAACGGTATTACC
AAC
CTTATAAAGATAAAGCTGACCCCTGAAGAAGAGGCCCATCTGAAAAAAAGTGCAAAAACACTCTGGG
AA
ATTCAGAATAAGCTTAAGCTTTAA


Translation (381 aa):
MSWTVPVVRASQRVSSVGANFLCLGMALCPRQATRIPLNGTWLFTPVSKMATVKSELIERFTSEKPVHHS
K
VSIIGTGSVGMACAISILLKGLSDELALVDLDEDKLKGETMDLQHGSPFTKMPNIVCSKDYFVTANSNL
V
IITAGARQEKGETRLNLVQRNVAIFKLMISSIVQYSPHCKLIIVSNPVDILTYVAWKLSAFPKNRIIGS
G
CNLDTARFRFLIGQKLGIHSESCHGWILGEHGDSSVPVWSGVNIAGVPLKDLNSDIGTDKDPEQWKNVH
K
EVTATAYEIIKMKGYTSWAIGLSVADLTESILKNLRRIHPVSTIIKGLYGIDEEVFLSIPCILGENGIT
N
LIKIKLTPEEEAHLKKSAKTLWEIQNKLKL




Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser