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Report for CCDS10587.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10587.1 Public Homo sapiens 16 ACSM1 24 110 108 CCDS HistoryNCBI Gene:116285Re-query CCDS DB by CCDS ID:10587.1Re-query CCDS DB by GeneID:116285See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10587.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000307493.8 ENSP00000301956.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000307493.8Link to Ensembl Protein Viewer:ENSP00000301956.3Re-query CCDS DB by Nucleotide ID:ENST00000307493Re-query CCDS DB by Protein ID:ENSP00000301956
Original member Current member EBI ENST00000520010.6 ENSP00000428047.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000520010.6Link to Ensembl Protein Viewer:ENSP00000428047.1Re-query CCDS DB by Nucleotide ID:ENST00000520010Re-query CCDS DB by Protein ID:ENSP00000428047
Original member Current member NCBI NM_001318890.3 NP_001305819.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001318890.3Link to Protein Sequence:NP_001305819.1Re-query CCDS DB by Nucleotide ID:NM_001318890Re-query CCDS DB by Protein ID:NP_001305819Link to BLAST:NP_001305819.1
Original member Current member NCBI NM_052956.3 NP_443188.2 Accepted alive Link to Nucleotide Sequence:NM_052956.3Link to Protein Sequence:NP_443188.2Re-query CCDS DB by Nucleotide ID:NM_052956Re-query CCDS DB by Protein ID:NP_443188Link to BLAST:NP_443188.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001305819.1 577 Q08AH1-1 577 100% 0 0
NP_443188.2 577 Q08AH1-1 577 100% 0 0

Chromosomal Locations for CCDS 10587.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 20623486 20623572 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 20624096 20624215 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 20625423 20625522 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 20627189 20627316 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 20636739 20636840 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 20637371 20637451 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 20640461 20640584 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 20661794 20661873 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 20669827 20669986 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 20671531 20671671 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 20682256 20682463 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 20685193 20685403 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 20690997 20691188 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1734 nt):
ATGCAGTGGCTAATGAGGTTCCGGACCCTCTGGGGCATCCACAAATCCTTCCACAACATCCACCCTGCCC
CTTCACAGCTGCGCTGCCGGTCTTTATCAGAATTTGGAGCCCCAAGATGGAATGACTATGAAGTACCGGA
GGAATTTAACTTTGCAAGTTATGTACTGGACTACTGGGCTCAAAAGGAGAAGGAGGGCAAGAGAGGTCCA
AATCCAGCTTTTTGGTGGGTGAATGGCCAAGGGGATGAAGTAAAGTGGAGCTTCAGAGAGATGGGAGACC
TAACCCGCCGTGTAGCCAACGTCTTCACACAGACCTGTGGCCTACAACAGGGAGACCATCTGGCCTTGAT
GCTGCCTCGAGTTCCTGAGTGGTGGCTGGTGGCTGTGGGCTGCATGCGAACAGGGATCATCTTCATTCCT
GCGACCATCCTGTTGAAGGCCAAAGACATTCTCTATCGACTACAGTTGTCTAAAGCCAAGGGCATTGTGA
CCATAGATGCCCTTGCCTCAGAGGTGGACTCCATAGCTTCTCAGTGCCCCTCTCTGAAAACCAAGCTCCT
GGTGTCTGATCACAGCCGTGAAGGGTGGCTGGACTTCCGATCGCTGGTTAAATCAGCATCCCCAGAACAC
ACCTGTGTTAAGTCAAAGACCTTGGACCCAATGGTCATCTTCTTCACCAGTGGGACCACAGGCTTCCCCA
AGATGGCAAAACACTCCCATGGGTTGGCCTTACAACCCTCCTTCCCAGGAAGTAGGAAATTACGGAGCCT
GAAGACATCTGATGTCTCCTGGTGCCTGTCGGACTCAGGATGGATTGTGGCTACCATTTGGACCCTGGTA
GAACCATGGACAGCGGGTTGTACAGTCTTTATCCACCATCTGCCACAGTTTGACACCAAGGTCATCATAC
AGACATTGTTGAAATACCCCATTAACCACTTTTGGGGGGTATCATCTATATATCGAATGATTCTGCAGCA
GGATTTCACCAGCATCAGGTTCCCTGCCCTGGAGCACTGCTATACTGGCGGGGAGGTCGTGTTGCCCAAG
GATCAGGAGGAGTGGAAAAGACGGACGGGCCTTCTGCTCTACGAGAACTATGGGCAGTCGGAAACGGGAC
TAATTTGTGCCACCTACTGGGGAATGAAGATCAAGCCGGGTTTCATGGGGAAGGCCACTCCACCCTACGA
CGTCCAGGTCATTGATGACAAGGGCAGCATCCTGCCACCTAACACAGAAGGAAACATTGGCATCAGAATC
AAACCTGTCAGGCCTGTGAGCCTCTTCATGTGCTATGAGGGTGACCCAGAGAAGACAGCTAAAGTGGAAT
GTGGGGACTTCTACAACACTGGGGACAGAGGTAAGATGGATGAAGAGGGCTACATTTGTTTCCTGGGGAG
GAGTGATGACATCATTAATGCCTCTGGGTATCGCATCGGGCCTGCAGAGGTTGAAAGCGCTTTGGTGGAG
CACCCAGCGGTGGCGGAGTCAGCCGTGGTGGGCAGCCCAGACCCGATTCGAGGGGAGGTGGTGAAGGCCT
TTATTGTCCTGACCCCACAGTTCCTGTCCCATGACAAGGATCAGCTGACCAAGGAACTGCAGCAGCATGT
CAAGTCAGTGACAGCCCCATACAAGTACCCAAGGAAGGTGGAGTTTGTCTCAGAGCTGCCAAAAACCATC
ACTGGCAAGATTGAACGGAAGGAACTTCGGAAAAAGGAGACTGGTCAGATGTAA

Translation (577 aa):
MQWLMRFRTLWGIHKSFHNIHPAPSQLRCRSLSEFGAPRWNDYEVPEEFNFASYVLDYWAQKEKEGKRGP
NPAFWWVNGQGDEVKWSFREMGDLTRRVANVFTQTCGLQQGDHLALMLPRVPEWWLVAVGCMRTGIIFIP
ATILLKAKDILYRLQLSKAKGIVTIDALASEVDSIASQCPSLKTKLLVSDHSREGWLDFRSLVKSASPEH
TCVKSKTLDPMVIFFTSGTTGFPKMAKHSHGLALQPSFPGSRKLRSLKTSDVSWCLSDSGWIVATIWTLV
EPWTAGCTVFIHHLPQFDTKVIIQTLLKYPINHFWGVSSIYRMILQQDFTSIRFPALEHCYTGGEVVLPK
DQEEWKRRTGLLLYENYGQSETGLICATYWGMKIKPGFMGKATPPYDVQVIDDKGSILPPNTEGNIGIRI
KPVRPVSLFMCYEGDPEKTAKVECGDFYNTGDRGKMDEEGYICFLGRSDDIINASGYRIGPAEVESALVE
HPAVAESAVVGSPDPIRGEVVKAFIVLTPQFLSHDKDQLTKELQQHVKSVTAPYKYPRKVEFVSELPKTI
TGKIERKELRKKETGQM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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